EnhancerDB
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  3. vista40150[chr3:16413996-16414432]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista40150[chr3:16413996-16414432]
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Tissue distribution of vista40150
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Transcription factor that possibly regulate vista40150[chr3:16413996-16414432]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr3 16413937 16414429 NFIC UCSC Txn Factor no Conserved 108528448
chr3 16413959 16414295 RFX5 UCSC Txn Factor no Conserved 108528449
chr3 16413971 16414342 RUNX3 UCSC Txn Factor no Conserved 108528450
chr3 16413976 16414393 RELA UCSC Txn Factor no Conserved 108528451
chr3 16413995 16414351 ATF2 UCSC Txn Factor no Conserved 108528452
chr3 16414016 16414386 EP300 UCSC Txn Factor no Conserved 108528453
chr3 16414027 16414368 FOXM1 UCSC Txn Factor no Conserved 108528454
chr3 16414040 16414365 SPI1 UCSC Txn Factor no Conserved 108528455
chr3 16414083 16414363 PAX5 UCSC Txn Factor no Conserved 108528456
chr3 16414089 16414318 IRF4 UCSC Txn Factor no Conserved 108528457
chr3 16414090 16414297 BCL11A UCSC Txn Factor no Conserved 108528458
chr3 16414110 16414440 EBF1 UCSC Txn Factor no Conserved 108528459
chr3 16414007 16414021 PAX6 JASPAR yes 718681
chr3 16414007 16414021 PAX6 JASPAR yes 70946417
chr3 16414017 16414029 POU2F1 JASPAR yes 718682
chr3 16414017 16414029 POU2F1 JASPAR yes 70946418
chr3 16414017 16414030 POU3F3 JASPAR yes 718683
chr3 16414017 16414030 POU3F3 JASPAR yes 70946419
chr3 16414017 16414031 POU1F1 JASPAR yes 718684
chr3 16414017 16414031 POU1F1 JASPAR yes 70946420
chr3 16414018 16414030 POU3F1 JASPAR yes 718685
chr3 16414018 16414030 POU3F2 JASPAR yes 718686
chr3 16414018 16414030 POU3F1 JASPAR yes 70946421
chr3 16414018 16414030 POU3F2 JASPAR yes 70946422
chr3 16414018 16414031 POU2F2 JASPAR yes 718687
chr3 16414018 16414031 POU2F2 JASPAR yes 70946423
chr3 16414019 16414028 POU3F4 JASPAR yes 718688
chr3 16414019 16414028 POU5F1B JASPAR yes 718689
chr3 16414019 16414028 POU3F4 JASPAR yes 70946424
chr3 16414019 16414028 POU5F1B JASPAR yes 70946425
chr3 16414020 16414027 POU2F1 TRANSFAC yes 718690
chr3 16414020 16414027 POU2F2 TRANSFAC yes 718691
chr3 16414020 16414027 POU2F1 TRANSFAC yes 70946426
chr3 16414020 16414027 POU2F2 TRANSFAC yes 70946427
chr3 16414024 16414034 PAX7 JASPAR yes 718692
chr3 16414024 16414034 PAX7 JASPAR yes 70946428
chr3 16414047 16414059 IRF1 JASPAR yes 718693
chr3 16414047 16414059 IRF1 JASPAR yes 70946429
chr3 16414077 16414082 SP1 TRANSFAC yes 718694
chr3 16414077 16414082 SP1 TRANSFAC yes 70946430
chr3 16414079 16414084 TFAP2A TRANSFAC yes 718695
chr3 16414079 16414084 TFAP2A TRANSFAC yes 70946431
chr3 16414079 16414085 MZF1 JASPAR yes 718696
chr3 16414079 16414085 MZF1 JASPAR yes 70946432
chr3 16414092 16414107 HNF4G JASPAR yes 718697
chr3 16414092 16414107 HNF4G JASPAR yes 70946433
chr3 16414093 16414107 NR2F1 JASPAR yes 718698
chr3 16414093 16414107 NR2F1 JASPAR yes 70946434
chr3 16414093 16414108 HNF4A JASPAR yes 718699
chr3 16414093 16414108 HNF4A JASPAR yes 70946435
chr3 16414100 16414118 RARA JASPAR yes 718700
chr3 16414100 16414118 RARA JASPAR yes 70946436
chr3 16414118 16414121 MYB TRANSFAC yes 718701
chr3 16414118 16414121 MYB TRANSFAC yes 70946437
chr3 16414136 16414141 ETS2 TRANSFAC yes 718702
chr3 16414136 16414141 ETS2 TRANSFAC yes 70946438
chr3 16414169 16414172 MYB TRANSFAC yes 718703
chr3 16414169 16414172 MYB TRANSFAC yes 70946439
chr3 16414179 16414191 HLF JASPAR yes 718704
chr3 16414179 16414191 HLF JASPAR yes 70946440
chr3 16414181 16414200 PAX5 JASPAR yes 718705
chr3 16414181 16414200 PAX5 JASPAR yes 70946441
chr3 16414190 16414203 ELF1 JASPAR yes 718706
chr3 16414190 16414203 ELF1 JASPAR yes 70946442
chr3 16414197 16414211 SPI1 JASPAR yes 718707
chr3 16414197 16414211 SPIC JASPAR yes 718708
chr3 16414197 16414211 SPI1 JASPAR yes 70946443
chr3 16414197 16414211 SPIC JASPAR yes 70946444
chr3 16414202 16414213 NFKB1 JASPAR yes 718709
chr3 16414202 16414213 NFKB1 JASPAR yes 70946445
chr3 16414203 16414208 ETS2 TRANSFAC yes 718710
chr3 16414203 16414208 ETS2 TRANSFAC yes 70946446
chr3 16414210 16414224 SPI1 JASPAR yes 718711
chr3 16414210 16414224 SPI1 JASPAR yes 70946447
chr3 16414216 16414231 PRDM1 JASPAR yes 718712
chr3 16414216 16414231 PRDM1 JASPAR yes 70946448
chr3 16414225 16414239 GLIS2 JASPAR yes 718713
chr3 16414225 16414239 GLIS2 JASPAR yes 70946449
chr3 16414234 16414253 PAX5 JASPAR yes 718714
chr3 16414234 16414253 PAX5 JASPAR yes 70946450
chr3 16414243 16414249 PEA3 TRANSFAC yes 718715
chr3 16414243 16414249 PEA3 TRANSFAC yes 70946451
chr3 16414281 16414293 PKNOX1 JASPAR yes 718716
chr3 16414281 16414293 TGIF1 JASPAR yes 718717
chr3 16414281 16414293 TGIF2 JASPAR yes 718718
chr3 16414281 16414293 PKNOX1 JASPAR yes 70946452
chr3 16414281 16414293 TGIF1 JASPAR yes 70946453
chr3 16414281 16414293 TGIF2 JASPAR yes 70946454
chr3 16414302 16414316 EBF1 JASPAR yes 718719
chr3 16414302 16414316 EBF1 JASPAR yes 70946455
chr3 16414302 16414317 ZIC3 JASPAR yes 718720
chr3 16414302 16414317 ZIC4 JASPAR yes 718721
chr3 16414302 16414317 ZIC3 JASPAR yes 70946456
chr3 16414302 16414317 ZIC4 JASPAR yes 70946457
chr3 16414303 16414314 EBF1 JASPAR yes 718722
chr3 16414303 16414314 EBF1 JASPAR yes 70946458
chr3 16414303 16414317 GLIS2 JASPAR yes 718723
chr3 16414303 16414317 GLIS3 JASPAR yes 718724
chr3 16414303 16414317 ZIC1 JASPAR yes 718725
chr3 16414303 16414317 GLIS2 JASPAR yes 70946459
chr3 16414303 16414317 GLIS3 JASPAR yes 70946460
chr3 16414303 16414317 ZIC1 JASPAR yes 70946461
chr3 16414304 16414310 MZF1 JASPAR yes 718726
chr3 16414304 16414310 MZF1 JASPAR yes 70946462
chr3 16414304 16414317 TFAP2A JASPAR yes 718727
chr3 16414304 16414317 TFAP2B JASPAR yes 718728
chr3 16414304 16414317 TFAP2C JASPAR yes 718729
chr3 16414304 16414317 TFAP2A JASPAR yes 70946463
chr3 16414304 16414317 TFAP2B JASPAR yes 70946464
chr3 16414304 16414317 TFAP2C JASPAR yes 70946465
chr3 16414305 16414316 EBF1 JASPAR yes 718730
chr3 16414305 16414316 EBF1 JASPAR yes 70946466
chr3 16414310 16414323 SMAD2 JASPAR yes 718731
chr3 16414310 16414323 SMAD2 JASPAR yes 70946467
chr3 16414311 16414316 SP1 TRANSFAC yes 718732
chr3 16414311 16414316 SP1 TRANSFAC yes 70946468
chr3 16414329 16414344 MEF2C JASPAR yes 718733
chr3 16414329 16414344 MEF2C JASPAR yes 70946469
chr3 16414330 16414345 MEF2A JASPAR yes 718734
chr3 16414330 16414345 MEF2A JASPAR yes 70946470
chr3 16414350 16414364 STAT1 JASPAR yes 718735
chr3 16414350 16414364 STAT1 JASPAR yes 70946471
chr3 16414350 16414365 STAT2 JASPAR yes 718736
chr3 16414350 16414365 STAT2 JASPAR yes 70946472
chr3 16414352 16414368 SOX8 JASPAR yes 718737
chr3 16414352 16414368 SOX8 JASPAR yes 70946473
chr3 16414354 16414359 ETS2 TRANSFAC yes 718738
chr3 16414354 16414359 ETS2 TRANSFAC yes 70946474
chr3 16414414 16414434 TP63 JASPAR yes 718739
chr3 16414414 16414434 TP63 JASPAR yes 70946475
chr3 16414426 16414439 POU2F2 JASPAR yes 718740
chr3 16414426 16414439 POU2F2 JASPAR yes 70946476
SNP sites on vista40150[chr3:16413996-16414432]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr3 16414018 rs10212328 C G
ATF2 EP300 NFIC PAX6 POU1F1 POU2F1 POU2F2 POU3F1 POU3F2 POU3F3 RELA RFX5 RUNX3
6580999
chr3 16414030 rs78829164 A C
ATF2 EP300 FOXM1 NFIC PAX7 POU1F1 POU2F2 POU3F1 POU3F2 POU3F3 RELA RFX5 RUNX3
6581000
chr3 16414033 rs150925290 TAAG T
ATF2 EP300 FOXM1 NFIC PAX7 RELA RFX5 RUNX3
6581001
chr3 16414185 rs6442599 C T
ATF2 BCL11A EBF1 EP300 FOXM1 HLF IRF4 NFIC PAX5 RELA RFX5 RUNX3 SPI1
6581002
chr3 16414198 rs689662 G A
ATF2 BCL11A EBF1 ELF1 EP300 FOXM1 IRF4 NFIC PAX5 RELA RFX5 RUNX3 SPI1 SPIC
6581003
chr3 16414216 rs150865315 G A
ATF2 BCL11A EBF1 EP300 FOXM1 IRF4 NFIC PAX5 PRDM1 RELA RFX5 RUNX3 SPI1
6581004
chr3 16414269 rs73041424 A G
ATF2 BCL11A EBF1 EP300 FOXM1 IRF4 NFIC PAX5 RELA RFX5 RUNX3 SPI1
6581005
chr3 16414294 rs185653116 C T
ATF2 BCL11A EBF1 EP300 FOXM1 IRF4 NFIC PAX5 RELA RFX5 RUNX3 SPI1
6581006
chr3 16414334 rs541124499 C T
ATF2 EBF1 EP300 FOXM1 MEF2A MEF2C NFIC PAX5 RELA RUNX3 SPI1
6581007
Genes possibly regulated by vista40150[chr3:16413996-16414432]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
Expression level of Genes
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No results
miRNAs possibly regulated by vista40150[chr3:16413996-16414432]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results