EnhancerDB
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  3. vista40155[chr3:16474276-16474529]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista40155[chr3:16474276-16474529]
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Tissue distribution of vista40155
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Transcription factor that possibly regulate vista40155[chr3:16474276-16474529]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr3 16474263 16474276 EOMES JASPAR yes 726823
chr3 16474263 16474276 EOMES JASPAR yes 70946678
chr3 16474266 16474282 ZNF143 JASPAR yes 726825
chr3 16474266 16474282 ZNF143 JASPAR yes 70946679
chr3 16474279 16474299 TP63 JASPAR yes 726826
chr3 16474279 16474299 TP63 JASPAR yes 70946680
chr3 16474280 16474298 TP73 JASPAR yes 726827
chr3 16474280 16474298 TP73 JASPAR yes 70946681
chr3 16474296 16474314 IRF2 JASPAR yes 726828
chr3 16474296 16474314 IRF2 JASPAR yes 70946682
chr3 16474297 16474318 IRF1 JASPAR yes 726829
chr3 16474297 16474318 IRF1 JASPAR yes 70946683
chr3 16474298 16474312 RXRB JASPAR yes 726830
chr3 16474298 16474312 RXRB JASPAR yes 70946684
chr3 16474299 16474314 PRDM1 JASPAR yes 726831
chr3 16474299 16474314 PRDM1 JASPAR yes 70946685
chr3 16474301 16474313 IRF1 JASPAR yes 726832
chr3 16474301 16474313 IRF1 JASPAR yes 70946686
chr3 16474301 16474315 IRF7 JASPAR yes 726833
chr3 16474301 16474315 IRF7 JASPAR yes 70946687
chr3 16474323 16474335 CREB1 JASPAR yes 726834
chr3 16474323 16474335 FOXC2 JASPAR yes 726835
chr3 16474323 16474335 CREB1 JASPAR yes 70946688
chr3 16474323 16474335 FOXC2 JASPAR yes 70946689
chr3 16474325 16474339 ATF7 JASPAR yes 726836
chr3 16474325 16474339 BATF3 JASPAR yes 726837
chr3 16474325 16474339 ATF7 JASPAR yes 70946690
chr3 16474325 16474339 BATF3 JASPAR yes 70946691
chr3 16474326 16474338 JDP2 JASPAR yes 726838
chr3 16474326 16474338 JDP2 JASPAR yes 70946692
chr3 16474328 16474333 ATF1 TRANSFAC yes 726839
chr3 16474328 16474333 ATF1 TRANSFAC yes 70946693
chr3 16474328 16474336 CREB1 JASPAR yes 726840
chr3 16474328 16474336 GMEB2 JASPAR yes 726841
chr3 16474328 16474336 CREB1 JASPAR yes 70946694
chr3 16474328 16474336 GMEB2 JASPAR yes 70946695
chr3 16474328 16474339 NFIL3 JASPAR yes 726842
chr3 16474328 16474339 NFIL3 JASPAR yes 70946696
chr3 16474367 16474384 PAX1 JASPAR yes 726843
chr3 16474367 16474384 PAX9 JASPAR yes 726844
chr3 16474367 16474384 PAX1 JASPAR yes 70946697
chr3 16474367 16474384 PAX9 JASPAR yes 70946698
chr3 16474371 16474383 HNF1B JASPAR yes 726845
chr3 16474371 16474383 HNF1B JASPAR yes 70946699
chr3 16474378 16474389 CEBPB JASPAR yes 726846
chr3 16474378 16474389 CEBPB JASPAR yes 70946700
chr3 16474380 16474401 ZNF263 JASPAR yes 726847
chr3 16474380 16474401 ZNF263 JASPAR yes 70946701
chr3 16474385 16474400 PRDM1 JASPAR yes 726848
chr3 16474385 16474400 PRDM1 JASPAR yes 70946702
chr3 16474386 16474407 IRF1 JASPAR yes 726849
chr3 16474386 16474407 IRF1 JASPAR yes 70946703
chr3 16474388 16474409 ZNF263 JASPAR yes 726850
chr3 16474388 16474409 ZNF263 JASPAR yes 70946704
chr3 16474389 16474394 ETS2 TRANSFAC yes 726851
chr3 16474389 16474394 ETS2 TRANSFAC yes 70946705
chr3 16474390 16474405 PRDM1 JASPAR yes 726852
chr3 16474390 16474405 STAT2 JASPAR yes 726853
chr3 16474390 16474405 PRDM1 JASPAR yes 70946706
chr3 16474390 16474405 STAT2 JASPAR yes 70946707
chr3 16474390 16474411 ZNF263 JASPAR yes 726854
chr3 16474390 16474411 ZNF263 JASPAR yes 70946708
chr3 16474391 16474412 IRF1 JASPAR yes 726855
chr3 16474391 16474412 IRF1 JASPAR yes 70946709
chr3 16474394 16474399 ETS2 TRANSFAC yes 726856
chr3 16474394 16474399 ETS2 TRANSFAC yes 70946710
chr3 16474395 16474409 STAT1 JASPAR yes 726857
chr3 16474395 16474409 STAT1 JASPAR yes 70946711
chr3 16474395 16474410 PRDM1 JASPAR yes 726858
chr3 16474395 16474410 STAT2 JASPAR yes 726859
chr3 16474395 16474410 PRDM1 JASPAR yes 70946712
chr3 16474395 16474410 STAT2 JASPAR yes 70946713
chr3 16474399 16474404 ETS2 TRANSFAC yes 726860
chr3 16474399 16474404 ETS2 TRANSFAC yes 70946714
chr3 16474434 16474447 SMAD2 JASPAR yes 726861
chr3 16474434 16474447 SMAD2 JASPAR yes 70946715
chr3 16474439 16474451 PKNOX1 JASPAR yes 726862
chr3 16474439 16474451 PKNOX2 JASPAR yes 726863
chr3 16474439 16474451 TGIF1 JASPAR yes 726864
chr3 16474439 16474451 TGIF2 JASPAR yes 726865
chr3 16474439 16474451 PKNOX1 JASPAR yes 70946716
chr3 16474439 16474451 PKNOX2 JASPAR yes 70946717
chr3 16474439 16474451 TGIF1 JASPAR yes 70946718
chr3 16474439 16474451 TGIF2 JASPAR yes 70946719
chr3 16474440 16474450 MSC JASPAR yes 726866
chr3 16474440 16474450 MYF6 JASPAR yes 726867
chr3 16474440 16474450 NHLH1 JASPAR yes 726868
chr3 16474440 16474450 TFAP4 JASPAR yes 726869
chr3 16474440 16474450 MSC JASPAR yes 70946720
chr3 16474440 16474450 MYF6 JASPAR yes 70946721
chr3 16474440 16474450 NHLH1 JASPAR yes 70946722
chr3 16474440 16474450 TFAP4 JASPAR yes 70946723
chr3 16474445 16474449 NFE TRANSFAC yes 726870
chr3 16474445 16474449 NFE TRANSFAC yes 70946724
chr3 16474474 16474480 SOX10 JASPAR yes 726871
chr3 16474474 16474480 SOX10 JASPAR yes 70946725
chr3 16474485 16474491 TCF4 TRANSFAC yes 726872
chr3 16474485 16474491 TCF4 TRANSFAC yes 70946726
chr3 16474490 16474508 SRF JASPAR yes 726873
chr3 16474490 16474508 SRF JASPAR yes 70946727
SNP sites on vista40155[chr3:16474276-16474529]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr3 16474332 rs4685337 C T
ATF1 ATF7 BATF3 CREB1 FOXC2 GMEB2 JDP2 NFIL3
6581743
chr3 16474409 rs73816454 G C
IRF1 PRDM1 STAT1 STAT2 ZNF263
6581744
chr3 16474493 rs369167373 T C
SRF
6581745
chr3 16474525 rs151301549 C A no 6581746
Genes possibly regulated by vista40155[chr3:16474276-16474529]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr3 16355081 16555533 - RFTN1 ENSG00000131378.9 16555533 0.73 0.99 3452 18996
Expression level of Genes
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miRNAs possibly regulated by vista40155[chr3:16474276-16474529]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results