EnhancerDB
  1. Home
  2. Enhancers
  3. vista40156[chr3:16489627-16489868]
View enhancers around input chromosomal region
Back to top

Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista40156[chr3:16489627-16489868]
Back to top
Tissue distribution of vista40156
Back to top
Transcription factor that possibly regulate vista40156[chr3:16489627-16489868]
Back to top
Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr3 16489622 16489637 FOXP1 JASPAR yes 728708
chr3 16489622 16489637 FOXP1 JASPAR yes 70946728
chr3 16489627 16489642 FOXP1 JASPAR yes 728709
chr3 16489627 16489642 FOXP1 JASPAR yes 70946729
chr3 16489627 16489648 IRF1 JASPAR yes 728710
chr3 16489627 16489648 IRF1 JASPAR yes 70946730
chr3 16489628 16489634 TBP TRANSFAC yes 728711
chr3 16489628 16489634 TBP TRANSFAC yes 70946731
chr3 16489628 16489643 FOXP1 JASPAR yes 728712
chr3 16489628 16489643 FOXP1 JASPAR yes 70946732
chr3 16489631 16489646 STAT2 JASPAR yes 728713
chr3 16489631 16489646 STAT2 JASPAR yes 70946733
chr3 16489647 16489651 H1TF2 TRANSFAC yes 728714
chr3 16489647 16489651 NFE TRANSFAC yes 728715
chr3 16489647 16489651 SRF TRANSFAC yes 728716
chr3 16489647 16489651 H1TF2 TRANSFAC yes 70946734
chr3 16489647 16489651 NFE TRANSFAC yes 70946735
chr3 16489647 16489651 SRF TRANSFAC yes 70946736
chr3 16489653 16489669 POU4F2 JASPAR yes 728717
chr3 16489653 16489669 POU4F3 JASPAR yes 728718
chr3 16489653 16489669 POU4F2 JASPAR yes 70946737
chr3 16489653 16489669 POU4F3 JASPAR yes 70946738
chr3 16489655 16489669 POU4F1 JASPAR yes 728719
chr3 16489655 16489669 POU4F1 JASPAR yes 70946739
chr3 16489658 16489668 HOXB13 JASPAR yes 728720
chr3 16489658 16489668 HOXD13 JASPAR yes 728721
chr3 16489658 16489668 HOXB13 JASPAR yes 70946740
chr3 16489658 16489668 HOXD13 JASPAR yes 70946741
chr3 16489658 16489669 HOXA10 JASPAR yes 728722
chr3 16489658 16489669 HOXA10 JASPAR yes 70946742
chr3 16489660 16489674 ONECUT1 JASPAR yes 728723
chr3 16489660 16489674 ONECUT2 JASPAR yes 728724
chr3 16489660 16489674 ONECUT3 JASPAR yes 728725
chr3 16489660 16489674 ONECUT1 JASPAR yes 70946743
chr3 16489660 16489674 ONECUT2 JASPAR yes 70946744
chr3 16489660 16489674 ONECUT3 JASPAR yes 70946745
chr3 16489661 16489671 CUX2 JASPAR yes 728726
chr3 16489661 16489671 CUX2 JASPAR yes 70946746
chr3 16489671 16489685 POU1F1 JASPAR yes 728727
chr3 16489671 16489685 POU1F1 JASPAR yes 70946747
chr3 16489672 16489684 POU3F1 JASPAR yes 728728
chr3 16489672 16489684 POU3F2 JASPAR yes 728729
chr3 16489672 16489684 POU3F1 JASPAR yes 70946748
chr3 16489672 16489684 POU3F2 JASPAR yes 70946749
chr3 16489674 16489679 MYB TRANSFAC yes 728730
chr3 16489674 16489679 MYB TRANSFAC yes 70946750
chr3 16489697 16489708 PHOX2A JASPAR yes 728731
chr3 16489697 16489708 PHOX2A JASPAR yes 70946751
chr3 16489701 16489709 RHOXF1 JASPAR yes 728732
chr3 16489701 16489709 RHOXF1 JASPAR yes 70946752
chr3 16489718 16489731 POU3F3 JASPAR yes 728733
chr3 16489718 16489731 POU3F3 JASPAR yes 70946753
chr3 16489718 16489732 POU1F1 JASPAR yes 728734
chr3 16489718 16489732 POU1F1 JASPAR yes 70946754
chr3 16489719 16489731 POU3F2 JASPAR yes 728735
chr3 16489719 16489731 POU3F2 JASPAR yes 70946755
chr3 16489719 16489732 POU2F2 JASPAR yes 728736
chr3 16489719 16489732 POU2F2 JASPAR yes 70946756
chr3 16489729 16489732 MYB TRANSFAC yes 728737
chr3 16489729 16489732 MYB TRANSFAC yes 70946757
chr3 16489735 16489750 FOXP1 JASPAR yes 728738
chr3 16489735 16489750 FOXP1 JASPAR yes 70946758
chr3 16489737 16489752 FOXP1 JASPAR yes 728739
chr3 16489737 16489752 FOXP1 JASPAR yes 70946759
chr3 16489739 16489751 IRF1 JASPAR yes 728740
chr3 16489739 16489751 IRF1 JASPAR yes 70946760
chr3 16489741 16489756 HNF1A JASPAR yes 728741
chr3 16489741 16489756 HNF1A JASPAR yes 70946761
chr3 16489742 16489758 POU4F3 JASPAR yes 728742
chr3 16489742 16489758 POU4F3 JASPAR yes 70946762
chr3 16489744 16489748 YY1 TRANSFAC yes 728743
chr3 16489744 16489748 YY1 TRANSFAC yes 70946763
chr3 16489747 16489757 HOXA13 JASPAR yes 728744
chr3 16489747 16489757 HOXA13 JASPAR yes 70946764
chr3 16489748 16489763 RUNX2 JASPAR yes 728745
chr3 16489748 16489763 RUNX2 JASPAR yes 70946765
chr3 16489751 16489762 PROP1 JASPAR yes 728746
chr3 16489751 16489762 RUNX1 JASPAR yes 728747
chr3 16489751 16489762 PROP1 JASPAR yes 70946766
chr3 16489751 16489762 RUNX1 JASPAR yes 70946767
chr3 16489755 16489772 BCL6B JASPAR yes 728748
chr3 16489755 16489772 BCL6B JASPAR yes 70946768
chr3 16489758 16489769 STAT1 JASPAR yes 728749
chr3 16489758 16489769 STAT1 JASPAR yes 70946769
chr3 16489760 16489773 HSF2 JASPAR yes 728750
chr3 16489760 16489773 HSF2 JASPAR yes 70946770
chr3 16489799 16489803 YY1 TRANSFAC yes 728751
chr3 16489799 16489803 YY1 TRANSFAC yes 70946771
chr3 16489817 16489821 NFE TRANSFAC yes 728752
chr3 16489817 16489821 NFE TRANSFAC yes 70946772
chr3 16489819 16489834 HSF1 JASPAR yes 728753
chr3 16489819 16489834 HSF1 JASPAR yes 70946773
chr3 16489830 16489836 TCF4 TRANSFAC yes 728754
chr3 16489830 16489836 TCF4 TRANSFAC yes 70946774
chr3 16489848 16489852 YY1 TRANSFAC yes 728755
chr3 16489848 16489852 YY1 TRANSFAC yes 70946775
chr3 16489859 16489874 MEF2C JASPAR yes 728756
chr3 16489859 16489874 MEF2C JASPAR yes 70946776
SNP sites on vista40156[chr3:16489627-16489868]
Back to top
chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr3 16489683 rs9865372 G T
POU1F1 POU3F1 POU3F2
6581894
chr3 16489784 rs56110304 T C no 6581895
chr3 16489864 rs148308891 C CA
MEF2C
6581896
Genes possibly regulated by vista40156[chr3:16489627-16489868]
Back to top
Details of Genes
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr3 16355081 16555533 - RFTN1 ENSG00000131378.9 16555533 0.73 0.99 3452 34335
Expression level of Genes
Back to top
miRNAs possibly regulated by vista40156[chr3:16489627-16489868]
Back to top
Details of miRNAs
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
Back to top
No results