EnhancerDB
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  3. vista40157[chr3:16508881-16509222]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista40157[chr3:16508881-16509222]
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Tissue distribution of vista40157
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Transcription factor that possibly regulate vista40157[chr3:16508881-16509222]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr3 16508905 16509172 ELF1 UCSC Txn Factor no Conserved 108528466
chr3 16508883 16508889 SP1 TRANSFAC yes 731534
chr3 16508883 16508889 SP1 TRANSFAC yes 70946777
chr3 16508883 16508893 SP1 JASPAR yes 731535
chr3 16508883 16508893 SP1 JASPAR yes 70946778
chr3 16508884 16508905 ZNF263 JASPAR yes 731536
chr3 16508884 16508905 ZNF263 JASPAR yes 70946779
chr3 16508908 16508914 YY1 JASPAR yes 731537
chr3 16508908 16508914 YY1 JASPAR yes 70946780
chr3 16508911 16508917 ZNF354C JASPAR yes 731538
chr3 16508911 16508917 ZNF354C JASPAR yes 70946781
chr3 16508917 16508927 TEAD1 JASPAR yes 731539
chr3 16508917 16508927 TEAD4 JASPAR yes 731540
chr3 16508917 16508927 TEAD1 JASPAR yes 70946782
chr3 16508917 16508927 TEAD4 JASPAR yes 70946783
chr3 16508917 16508929 TEAD1 JASPAR yes 731541
chr3 16508917 16508929 TEAD1 JASPAR yes 70946784
chr3 16508918 16508926 TEAD3 JASPAR yes 731542
chr3 16508918 16508926 TEAD3 JASPAR yes 70946785
chr3 16508966 16508975 THAP1 JASPAR yes 731543
chr3 16508966 16508975 THAP1 JASPAR yes 70946786
chr3 16509002 16509011 NKX2-8 JASPAR yes 731544
chr3 16509002 16509011 NKX2-8 JASPAR yes 70946787
chr3 16509005 16509016 NFE2 JASPAR yes 731545
chr3 16509005 16509016 NFE2 JASPAR yes 70946788
chr3 16509006 16509015 JDP2 JASPAR yes 731546
chr3 16509006 16509015 JDP2 JASPAR yes 70946789
chr3 16509006 16509017 JUNB JASPAR yes 731547
chr3 16509006 16509017 JUNB JASPAR yes 70946790
chr3 16509007 16509018 BATF JASPAR yes 731548
chr3 16509007 16509018 BATF JASPAR yes 70946791
chr3 16509018 16509038 TP53 JASPAR yes 731549
chr3 16509018 16509038 TP53 JASPAR yes 70946792
chr3 16509029 16509038 NFIX JASPAR yes 731550
chr3 16509029 16509038 NFIX JASPAR yes 70946793
chr3 16509031 16509037 NFIC JASPAR yes 731551
chr3 16509031 16509037 NFIC JASPAR yes 70946794
chr3 16509031 16509051 ESR1 JASPAR yes 731552
chr3 16509031 16509051 ESR1 JASPAR yes 70946795
chr3 16509034 16509052 ESR2 JASPAR yes 731553
chr3 16509034 16509052 ESR2 JASPAR yes 70946796
chr3 16509035 16509045 MAX JASPAR yes 731554
chr3 16509035 16509045 MAX JASPAR yes 70946797
chr3 16509035 16509050 AR JASPAR yes 731555
chr3 16509035 16509050 AR JASPAR yes 70946798
chr3 16509036 16509051 ESR2 JASPAR yes 731556
chr3 16509036 16509051 ESR2 JASPAR yes 70946799
chr3 16509038 16509049 NRL JASPAR yes 731557
chr3 16509038 16509049 NRL JASPAR yes 70946800
chr3 16509045 16509062 RARA JASPAR yes 731558
chr3 16509045 16509062 RARA JASPAR yes 70946801
chr3 16509047 16509059 EHF JASPAR yes 731559
chr3 16509047 16509059 ELF4 JASPAR yes 731560
chr3 16509047 16509059 EHF JASPAR yes 70946802
chr3 16509047 16509059 ELF4 JASPAR yes 70946803
chr3 16509051 16509057 ETS1 JASPAR yes 731561
chr3 16509051 16509057 SPI1 JASPAR yes 731562
chr3 16509051 16509057 ETS1 JASPAR yes 70946804
chr3 16509051 16509057 SPI1 JASPAR yes 70946805
chr3 16509053 16509065 PROX1 JASPAR yes 731563
chr3 16509053 16509065 PROX1 JASPAR yes 70946806
chr3 16509074 16509084 SP1 JASPAR yes 731564
chr3 16509074 16509084 SP1 JASPAR yes 70946807
chr3 16509076 16509080 LFA1 TRANSFAC yes 731565
chr3 16509076 16509080 LFA1 TRANSFAC yes 70946808
chr3 16509092 16509105 NFKB1 JASPAR yes 731566
chr3 16509092 16509105 NFKB2 JASPAR yes 731567
chr3 16509092 16509105 NFKB1 JASPAR yes 70946809
chr3 16509092 16509105 NFKB2 JASPAR yes 70946810
chr3 16509092 16509112 TP53 JASPAR yes 731568
chr3 16509092 16509112 TP53 JASPAR yes 70946811
chr3 16509093 16509104 NFKB1 JASPAR yes 731569
chr3 16509093 16509104 NFKB1 JASPAR yes 70946812
chr3 16509094 16509104 NFKB1 JASPAR yes 731570
chr3 16509094 16509104 NFKB1 JASPAR yes 70946813
chr3 16509094 16509105 NFKB1 JASPAR yes 731571
chr3 16509094 16509105 NFKB1 JASPAR yes 70946814
chr3 16509095 16509105 RELA JASPAR yes 731572
chr3 16509095 16509105 REL JASPAR yes 731573
chr3 16509095 16509105 RELA JASPAR yes 70946815
chr3 16509095 16509105 REL JASPAR yes 70946816
chr3 16509098 16509107 HIC2 JASPAR yes 731574
chr3 16509098 16509107 HIC2 JASPAR yes 70946817
chr3 16509104 16509118 RXRB JASPAR yes 731575
chr3 16509104 16509118 RXRB JASPAR yes 70946818
chr3 16509107 16509121 SPI1 JASPAR yes 731576
chr3 16509107 16509121 SPIC JASPAR yes 731577
chr3 16509107 16509121 SPI1 JASPAR yes 70946819
chr3 16509107 16509121 SPIC JASPAR yes 70946820
chr3 16509113 16509118 ETS2 TRANSFAC yes 731578
chr3 16509113 16509118 ETS2 TRANSFAC yes 70946821
chr3 16509141 16509159 SRF JASPAR yes 731579
chr3 16509141 16509159 SRF JASPAR yes 70946822
chr3 16509142 16509156 PLAG1 JASPAR yes 731580
chr3 16509142 16509156 PLAG1 JASPAR yes 70946823
chr3 16509168 16509189 IRF1 JASPAR yes 731581
chr3 16509168 16509189 IRF1 JASPAR yes 70946824
chr3 16509172 16509186 STAT1 JASPAR yes 731582
chr3 16509172 16509186 STAT1 JASPAR yes 70946825
chr3 16509172 16509187 STAT2 JASPAR yes 731583
chr3 16509172 16509187 STAT2 JASPAR yes 70946826
chr3 16509214 16509228 TCF7L2 JASPAR yes 731584
chr3 16509214 16509228 TCF7L2 JASPAR yes 70946827
chr3 16509214 16509229 LEF1 JASPAR yes 731585
chr3 16509214 16509229 LEF1 JASPAR yes 70946828
SNP sites on vista40157[chr3:16508881-16509222]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr3 16508972 rs11711146 C T
ELF1 THAP1
6582101
chr3 16509094 rs530051036 G A
ELF1 NFKB1 NFKB2 TP53
6582102
chr3 16509163 rs546456911 C T
ELF1
6582103
Genes possibly regulated by vista40157[chr3:16508881-16509222]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr3 16355081 16555533 - RFTN1 ENSG00000131378.9 16555533 0.73 0.99 3452 53689
Expression level of Genes
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miRNAs possibly regulated by vista40157[chr3:16508881-16509222]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results