EnhancerDB
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  3. vista40168[chr3:16562564-16562943]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista40168[chr3:16562564-16562943]
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Tissue distribution of vista40168
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Transcription factor that possibly regulate vista40168[chr3:16562564-16562943]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr3 16561992 16563434 POLR2A UCSC Txn Factor no Conserved 108528488
chr3 16561992 16563434 POLR2A UCSC Txn Factor no Conserved 108528489
chr3 16562512 16563092 NFIC UCSC Txn Factor no Conserved 108528490
chr3 16562562 16563273 ATF2 UCSC Txn Factor no Conserved 108528491
chr3 16562598 16563003 FOXM1 UCSC Txn Factor no Conserved 108528492
chr3 16562601 16563014 RUNX3 UCSC Txn Factor no Conserved 108528493
chr3 16562639 16562899 MEF2A UCSC Txn Factor no Conserved 108528494
chr3 16562716 16562931 SRF UCSC Txn Factor no Conserved 108528495
chr3 16562747 16563009 SPI1 UCSC Txn Factor no Conserved 108528496
chr3 16562772 16563002 BATF UCSC Txn Factor no Conserved 108528497
chr3 16562605 16562616 E2F6 JASPAR yes 736863
chr3 16562605 16562616 E2F6 JASPAR yes 70947359
chr3 16562614 16562620 SP1 TRANSFAC yes 736864
chr3 16562614 16562620 SP1 TRANSFAC yes 70947360
chr3 16562631 16562641 NFATC3 JASPAR yes 736865
chr3 16562631 16562641 NFATC3 JASPAR yes 70947361
chr3 16562650 16562654 YY1 TRANSFAC yes 736866
chr3 16562650 16562654 YY1 TRANSFAC yes 70947362
chr3 16562653 16562663 MZF1 JASPAR yes 736867
chr3 16562653 16562663 MZF1 JASPAR yes 70947363
chr3 16562653 16562665 INSM1 JASPAR yes 736868
chr3 16562653 16562665 INSM1 JASPAR yes 70947364
chr3 16562661 16562664 MYB TRANSFAC yes 736869
chr3 16562661 16562664 MYB TRANSFAC yes 70947365
chr3 16562688 16562698 TBX21 JASPAR yes 736870
chr3 16562688 16562698 TBX21 JASPAR yes 70947366
chr3 16562688 16562699 TBX20 JASPAR yes 736871
chr3 16562688 16562699 TBX2 JASPAR yes 736872
chr3 16562688 16562699 TBX20 JASPAR yes 70947367
chr3 16562688 16562699 TBX2 JASPAR yes 70947368
chr3 16562688 16562701 EOMES JASPAR yes 736873
chr3 16562688 16562701 EOMES JASPAR yes 70947369
chr3 16562689 16562697 MGA JASPAR yes 736874
chr3 16562689 16562697 TBX15 JASPAR yes 736875
chr3 16562689 16562697 TBX1 JASPAR yes 736876
chr3 16562689 16562697 TBX4 JASPAR yes 736877
chr3 16562689 16562697 TBX5 JASPAR yes 736878
chr3 16562689 16562697 MGA JASPAR yes 70947370
chr3 16562689 16562697 TBX15 JASPAR yes 70947371
chr3 16562689 16562697 TBX1 JASPAR yes 70947372
chr3 16562689 16562697 TBX4 JASPAR yes 70947373
chr3 16562689 16562697 TBX5 JASPAR yes 70947374
chr3 16562689 16562699 TBR1 JASPAR yes 736879
chr3 16562689 16562699 TBR1 JASPAR yes 70947375
chr3 16562698 16562708 MSC JASPAR yes 736880
chr3 16562698 16562708 MSC JASPAR yes 70947376
chr3 16562718 16562732 E2F7 JASPAR yes 736881
chr3 16562718 16562732 E2F7 JASPAR yes 70947377
chr3 16562718 16562739 ZNF263 JASPAR yes 736882
chr3 16562718 16562739 ZNF263 JASPAR yes 70947378
chr3 16562725 16562746 ZNF263 JASPAR yes 736883
chr3 16562725 16562746 ZNF263 JASPAR yes 70947379
chr3 16562732 16562744 INSM1 JASPAR yes 736884
chr3 16562732 16562744 INSM1 JASPAR yes 70947380
chr3 16562733 16562743 MZF1 JASPAR yes 736885
chr3 16562733 16562743 MZF1 JASPAR yes 70947381
chr3 16562733 16562747 PLAG1 JASPAR yes 736886
chr3 16562733 16562747 PLAG1 JASPAR yes 70947382
chr3 16562734 16562754 RREB1 JASPAR yes 736887
chr3 16562734 16562754 RREB1 JASPAR yes 70947383
chr3 16562739 16562745 ZNF354C JASPAR yes 736888
chr3 16562739 16562745 ZNF354C JASPAR yes 70947384
chr3 16562739 16562759 RREB1 JASPAR yes 736889
chr3 16562739 16562759 RREB1 JASPAR yes 70947385
chr3 16562742 16562762 RREB1 JASPAR yes 736890
chr3 16562742 16562762 RREB1 JASPAR yes 70947386
chr3 16562743 16562763 RREB1 JASPAR yes 736891
chr3 16562743 16562763 RREB1 JASPAR yes 70947387
chr3 16562747 16562767 RREB1 JASPAR yes 736892
chr3 16562747 16562767 RREB1 JASPAR yes 70947388
chr3 16562755 16562770 MEF2A JASPAR yes 736893
chr3 16562755 16562770 MEF2A JASPAR yes 70947389
chr3 16562762 16562766 TEAD2 TRANSFAC yes 736894
chr3 16562762 16562766 TEAD2 TRANSFAC yes 70947390
chr3 16562764 16562767 MYB TRANSFAC yes 736895
chr3 16562764 16562767 MYB TRANSFAC yes 70947391
chr3 16562772 16562776 TEAD2 TRANSFAC yes 736896
chr3 16562772 16562776 TEAD2 TRANSFAC yes 70947392
chr3 16562772 16562777 TBP TRANSFAC yes 736897
chr3 16562772 16562777 TBP TRANSFAC yes 70947393
chr3 16562778 16562788 NFKB1 JASPAR yes 736898
chr3 16562778 16562788 NFKB1 JASPAR yes 70947394
chr3 16562781 16562788 SPI1 JASPAR yes 736899
chr3 16562781 16562788 SPI1 JASPAR yes 70947395
chr3 16562781 16562789 FEV JASPAR yes 736900
chr3 16562781 16562789 FEV JASPAR yes 70947396
chr3 16562783 16562788 ETS2 TRANSFAC yes 736901
chr3 16562783 16562788 ETS2 TRANSFAC yes 70947397
chr3 16562803 16562806 MYB TRANSFAC yes 736902
chr3 16562803 16562806 MYB TRANSFAC yes 70947398
chr3 16562814 16562817 MYB TRANSFAC yes 736903
chr3 16562814 16562817 MYB TRANSFAC yes 70947399
chr3 16562820 16562838 SRF JASPAR yes 736904
chr3 16562820 16562838 SRF JASPAR yes 70947400
chr3 16562822 16562838 SRF JASPAR yes 736905
chr3 16562822 16562838 SRF JASPAR yes 70947401
chr3 16562822 16562840 SRF JASPAR yes 736906
chr3 16562822 16562840 SRF JASPAR yes 70947402
chr3 16562823 16562835 SRF JASPAR yes 736907
chr3 16562823 16562835 SRF JASPAR yes 70947403
chr3 16562825 16562834 SRF TRANSFAC yes 736908
chr3 16562825 16562834 SRF TRANSFAC yes 70947404
chr3 16562825 16562837 SRF JASPAR yes 736909
chr3 16562825 16562837 SRF JASPAR yes 70947405
chr3 16562839 16562843 YY1 TRANSFAC yes 736910
chr3 16562839 16562843 YY1 TRANSFAC yes 70947406
chr3 16562845 16562852 SPIB JASPAR yes 736911
chr3 16562845 16562852 SPIB JASPAR yes 70947407
chr3 16562851 16562855 YY1 TRANSFAC yes 736912
chr3 16562851 16562855 YY1 TRANSFAC yes 70947408
chr3 16562855 16562861 MZF1 JASPAR yes 736913
chr3 16562855 16562861 MZF1 JASPAR yes 70947409
chr3 16562860 16562870 MAX JASPAR yes 736914
chr3 16562860 16562870 MAX JASPAR yes 70947410
chr3 16562860 16562871 USF2 JASPAR yes 736915
chr3 16562860 16562871 USF2 JASPAR yes 70947411
chr3 16562861 16562871 TFEC JASPAR yes 736916
chr3 16562861 16562871 TFEC JASPAR yes 70947412
chr3 16562885 16562899 SPI1 JASPAR yes 736917
chr3 16562885 16562899 SPIC JASPAR yes 736918
chr3 16562885 16562899 SPI1 JASPAR yes 70947413
chr3 16562885 16562899 SPIC JASPAR yes 70947414
chr3 16562889 16562895 MZF1 JASPAR yes 736919
chr3 16562889 16562895 MZF1 JASPAR yes 70947415
chr3 16562893 16562897 YY1 TRANSFAC yes 736920
chr3 16562893 16562897 YY1 TRANSFAC yes 70947416
chr3 16562893 16562908 STAT1 JASPAR yes 736921
chr3 16562893 16562908 STAT1 JASPAR yes 70947417
chr3 16562895 16562906 STAT1 JASPAR yes 736922
chr3 16562895 16562906 STAT3 JASPAR yes 736923
chr3 16562895 16562906 STAT1 JASPAR yes 70947418
chr3 16562895 16562906 STAT3 JASPAR yes 70947419
chr3 16562908 16562922 ONECUT2 JASPAR yes 736924
chr3 16562908 16562922 ONECUT3 JASPAR yes 736925
chr3 16562908 16562922 ONECUT2 JASPAR yes 70947420
chr3 16562908 16562922 ONECUT3 JASPAR yes 70947421
chr3 16562910 16562921 FOXB1 JASPAR yes 736926
chr3 16562910 16562921 FOXC1 JASPAR yes 736927
chr3 16562910 16562921 FOXB1 JASPAR yes 70947422
chr3 16562910 16562921 FOXC1 JASPAR yes 70947423
chr3 16562924 16562942 MAFF JASPAR yes 736928
chr3 16562924 16562942 MAFF JASPAR yes 70947424
chr3 16562926 16562947 MAFG JASPAR yes 736929
chr3 16562926 16562947 MAFG JASPAR yes 70947425
chr3 16562927 16562941 PAX6 JASPAR yes 736930
chr3 16562927 16562941 PAX6 JASPAR yes 70947426
chr3 16562929 16562940 BATF JASPAR yes 736931
chr3 16562929 16562940 BATF JASPAR yes 70947427
SNP sites on vista40168[chr3:16562564-16562943]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr3 16562642 rs141014817 A G
ATF2 FOXM1 MEF2A NFIC POLR2A RUNX3
6582642
Genes possibly regulated by vista40168[chr3:16562564-16562943]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr3 16355081 16555533 - RFTN1 ENSG00000131378.9 16555533 0.73 0.99 3452 92969
Expression level of Genes
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miRNAs possibly regulated by vista40168[chr3:16562564-16562943]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results