EnhancerDB
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  3. vista40169[chr3:16564505-16564705]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista40169[chr3:16564505-16564705]
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Tissue distribution of vista40169
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Transcription factor that possibly regulate vista40169[chr3:16564505-16564705]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr3 16564501 16564514 SMAD2 JASPAR yes 737142
chr3 16564501 16564514 SMAD2 JASPAR yes 70947428
chr3 16564508 16564522 SPIC JASPAR yes 737143
chr3 16564508 16564522 SPIC JASPAR yes 70947429
chr3 16564509 16564522 ELF1 JASPAR yes 737144
chr3 16564509 16564522 ELF1 JASPAR yes 70947430
chr3 16564512 16564519 SPIB JASPAR yes 737145
chr3 16564512 16564519 SPIB JASPAR yes 70947431
chr3 16564512 16564522 ETV6 JASPAR yes 737146
chr3 16564512 16564522 GABPA JASPAR yes 737147
chr3 16564512 16564522 ETV6 JASPAR yes 70947432
chr3 16564512 16564522 GABPA JASPAR yes 70947433
chr3 16564512 16564523 ELK4 JASPAR yes 737148
chr3 16564512 16564523 FLI1 JASPAR yes 737149
chr3 16564512 16564523 ELK4 JASPAR yes 70947434
chr3 16564512 16564523 FLI1 JASPAR yes 70947435
chr3 16564513 16564521 EHF JASPAR yes 737150
chr3 16564513 16564521 EHF JASPAR yes 70947436
chr3 16564514 16564521 SPI1 JASPAR yes 737151
chr3 16564514 16564521 SPI1 JASPAR yes 70947437
chr3 16564517 16564530 SMAD2 JASPAR yes 737152
chr3 16564517 16564530 SMAD2 JASPAR yes 70947438
chr3 16564546 16564556 TFEB JASPAR yes 737153
chr3 16564546 16564556 TFEC JASPAR yes 737154
chr3 16564546 16564556 TFEB JASPAR yes 70947439
chr3 16564546 16564556 TFEC JASPAR yes 70947440
chr3 16564546 16564557 USF1 JASPAR yes 737155
chr3 16564546 16564557 USF2 JASPAR yes 737156
chr3 16564546 16564557 USF1 JASPAR yes 70947441
chr3 16564546 16564557 USF2 JASPAR yes 70947442
chr3 16564548 16564561 NR2F1 JASPAR yes 737157
chr3 16564548 16564561 NR2F1 JASPAR yes 70947443
chr3 16564551 16564559 NR4A2 JASPAR yes 737158
chr3 16564551 16564559 NR4A2 JASPAR yes 70947444
chr3 16564551 16564564 JUN JASPAR yes 737159
chr3 16564551 16564564 JUN JASPAR yes 70947445
chr3 16564552 16564560 CREB1 JASPAR yes 737160
chr3 16564552 16564560 CREB1 JASPAR yes 70947446
chr3 16564571 16564586 MAFK JASPAR yes 737161
chr3 16564571 16564586 MAFK JASPAR yes 70947447
chr3 16564572 16564583 BATF JASPAR yes 737162
chr3 16564572 16564583 BATF JASPAR yes 70947448
chr3 16564627 16564639 FOXI1 JASPAR yes 737163
chr3 16564627 16564639 FOXI1 JASPAR yes 70947449
chr3 16564647 16564656 ZEB1 JASPAR yes 737164
chr3 16564647 16564656 ZEB1 JASPAR yes 70947450
chr3 16564648 16564658 TCF3 JASPAR yes 737165
chr3 16564648 16564658 TCF4 JASPAR yes 737166
chr3 16564648 16564658 TCF3 JASPAR yes 70947451
chr3 16564648 16564658 TCF4 JASPAR yes 70947452
chr3 16564649 16564658 SNAI2 JASPAR yes 737167
chr3 16564649 16564658 SNAI2 JASPAR yes 70947453
chr3 16564650 16564655 USF2 TRANSFAC yes 737168
chr3 16564650 16564655 USF2 TRANSFAC yes 70947454
chr3 16564664 16564672 NR4A2 JASPAR yes 737169
chr3 16564664 16564672 NR4A2 JASPAR yes 70947455
chr3 16564664 16564678 RXRB JASPAR yes 737170
chr3 16564664 16564678 RXRG JASPAR yes 737171
chr3 16564664 16564678 RXRB JASPAR yes 70947456
chr3 16564664 16564678 RXRG JASPAR yes 70947457
chr3 16564666 16564670 ESR1 TRANSFAC yes 737172
chr3 16564666 16564670 ESR1 TRANSFAC yes 70947458
chr3 16564671 16564675 YY1 TRANSFAC yes 737173
chr3 16564671 16564675 YY1 TRANSFAC yes 70947459
chr3 16564687 16564702 FOXP1 JASPAR yes 737174
chr3 16564687 16564702 FOXP1 JASPAR yes 70947460
chr3 16564690 16564701 FOXP2 JASPAR yes 737175
chr3 16564690 16564701 FOXP2 JASPAR yes 70947461
chr3 16564690 16564704 IRF7 JASPAR yes 737176
chr3 16564690 16564704 IRF7 JASPAR yes 70947462
chr3 16564691 16564705 STAT1 JASPAR yes 737177
chr3 16564691 16564705 STAT1 JASPAR yes 70947463
chr3 16564691 16564706 STAT2 JASPAR yes 737178
chr3 16564691 16564706 STAT2 JASPAR yes 70947464
chr3 16564692 16564701 SRY JASPAR yes 737179
chr3 16564692 16564701 SRY JASPAR yes 70947465
chr3 16564692 16564704 IRF1 JASPAR yes 737180
chr3 16564692 16564704 IRF1 JASPAR yes 70947466
chr3 16564704 16564722 TP73 JASPAR yes 737181
chr3 16564704 16564722 TP73 JASPAR yes 70947467
SNP sites on vista40169[chr3:16564505-16564705]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr3 16564606 rs7638795 T C no 6582656
chr3 16564640 rs7649083 A C no 6582657
Genes possibly regulated by vista40169[chr3:16564505-16564705]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr3 16355081 16555533 - RFTN1 ENSG00000131378.9 16555533 0.73 0.99 3452 91028
Expression level of Genes
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miRNAs possibly regulated by vista40169[chr3:16564505-16564705]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results