EnhancerDB
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  3. vista40173[chr3:16832679-16833131]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista40173[chr3:16832679-16833131]
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Tissue distribution of vista40173
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Transcription factor that possibly regulate vista40173[chr3:16832679-16833131]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr3 16832669 16832688 REST JASPAR yes 755673
chr3 16832669 16832688 REST JASPAR yes 70947575
chr3 16832682 16832694 NHLH1 JASPAR yes 755674
chr3 16832682 16832694 NHLH1 JASPAR yes 70947576
chr3 16832687 16832696 HIC2 JASPAR yes 755675
chr3 16832687 16832696 HIC2 JASPAR yes 70947577
chr3 16832690 16832694 LFA1 TRANSFAC yes 755676
chr3 16832690 16832694 LFA1 TRANSFAC yes 70947578
chr3 16832715 16832727 PKNOX2 JASPAR yes 755677
chr3 16832715 16832727 PKNOX2 JASPAR yes 70947579
chr3 16832724 16832739 PRDM1 JASPAR yes 755678
chr3 16832724 16832739 PRDM1 JASPAR yes 70947580
chr3 16832725 16832737 IRF1 JASPAR yes 755679
chr3 16832725 16832737 IRF1 JASPAR yes 70947581
chr3 16832735 16832739 NFE TRANSFAC yes 755680
chr3 16832735 16832739 NFE TRANSFAC yes 70947582
chr3 16832741 16832751 RELA JASPAR yes 755681
chr3 16832741 16832751 REL JASPAR yes 755682
chr3 16832741 16832751 RELA JASPAR yes 70947583
chr3 16832741 16832751 REL JASPAR yes 70947584
chr3 16832742 16832747 GATA2 JASPAR yes 755683
chr3 16832742 16832747 GATA2 JASPAR yes 70947585
chr3 16832742 16832755 HSF1 JASPAR yes 755684
chr3 16832742 16832755 HSF2 JASPAR yes 755685
chr3 16832742 16832755 HSF1 JASPAR yes 70947586
chr3 16832742 16832755 HSF2 JASPAR yes 70947587
chr3 16832758 16832769 USF2 JASPAR yes 755686
chr3 16832758 16832769 USF2 JASPAR yes 70947588
chr3 16832773 16832788 JUND JASPAR yes 755687
chr3 16832773 16832788 JUND JASPAR yes 70947589
chr3 16832774 16832787 JUN JASPAR yes 755688
chr3 16832774 16832787 JUN JASPAR yes 70947590
chr3 16832775 16832789 ATF7 JASPAR yes 755689
chr3 16832775 16832789 ATF7 JASPAR yes 70947591
chr3 16832778 16832786 CREB1 JASPAR yes 755690
chr3 16832778 16832786 CREB1 JASPAR yes 70947592
chr3 16832779 16832787 NR4A2 JASPAR yes 755691
chr3 16832779 16832787 NR4A2 JASPAR yes 70947593
chr3 16832780 16832795 ESR2 JASPAR yes 755692
chr3 16832780 16832795 ESR2 JASPAR yes 70947594
chr3 16832781 16832785 ESR1 TRANSFAC yes 755693
chr3 16832781 16832785 ESR1 TRANSFAC yes 70947595
chr3 16832797 16832802 MYC TRANSFAC yes 755694
chr3 16832797 16832802 MYC TRANSFAC yes 70947596
chr3 16832800 16832813 NR2F1 JASPAR yes 755695
chr3 16832800 16832813 NR2F1 JASPAR yes 70947597
chr3 16832801 16832809 CREB1 JASPAR yes 755696
chr3 16832801 16832809 CREB1 JASPAR yes 70947598
chr3 16832804 16832808 ESR1 TRANSFAC yes 755697
chr3 16832804 16832808 ESR1 TRANSFAC yes 70947599
chr3 16832831 16832839 SP1 TRANSFAC yes 755698
chr3 16832831 16832839 SP1 TRANSFAC yes 70947600
chr3 16832861 16832879 SRF JASPAR yes 755699
chr3 16832861 16832879 SRF JASPAR yes 70947601
chr3 16832863 16832879 SRF JASPAR yes 755700
chr3 16832863 16832879 SRF JASPAR yes 70947602
chr3 16832863 16832881 SRF JASPAR yes 755701
chr3 16832863 16832881 SRF JASPAR yes 70947603
chr3 16832866 16832878 SRF JASPAR yes 755702
chr3 16832866 16832878 SRF JASPAR yes 70947604
chr3 16832869 16832873 TEAD2 TRANSFAC yes 755703
chr3 16832869 16832873 TEAD2 TRANSFAC yes 70947605
chr3 16832875 16832886 CDX2 JASPAR yes 755704
chr3 16832875 16832886 CDX2 JASPAR yes 70947606
chr3 16832876 16832880 TEAD2 TRANSFAC yes 755705
chr3 16832876 16832880 TEAD2 TRANSFAC yes 70947607
chr3 16832876 16832887 HOXA10 JASPAR yes 755706
chr3 16832876 16832887 HOXA10 JASPAR yes 70947608
chr3 16832877 16832886 CDX1 JASPAR yes 755707
chr3 16832877 16832886 CDX1 JASPAR yes 70947609
chr3 16832877 16832887 HOXA13 JASPAR yes 755708
chr3 16832877 16832887 HOXD13 JASPAR yes 755709
chr3 16832877 16832887 HOXA13 JASPAR yes 70947610
chr3 16832877 16832887 HOXD13 JASPAR yes 70947611
chr3 16832881 16832893 YY1 JASPAR yes 755710
chr3 16832881 16832893 YY1 JASPAR yes 70947612
chr3 16832887 16832902 FOXP1 JASPAR yes 755711
chr3 16832887 16832902 FOXP1 JASPAR yes 70947613
chr3 16832889 16832904 FOXP1 JASPAR yes 755712
chr3 16832889 16832904 FOXP1 JASPAR yes 70947614
chr3 16832892 16832907 FOXP1 JASPAR yes 755713
chr3 16832892 16832907 FOXP1 JASPAR yes 70947615
chr3 16832906 16832912 YY1 JASPAR yes 755714
chr3 16832906 16832912 YY1 JASPAR yes 70947616
chr3 16832928 16832940 HLF JASPAR yes 755715
chr3 16832928 16832940 HLF JASPAR yes 70947617
chr3 16832966 16832980 RORA JASPAR yes 755716
chr3 16832966 16832980 RORA JASPAR yes 70947618
chr3 16832978 16832994 SOX8 JASPAR yes 755717
chr3 16832978 16832994 SOX8 JASPAR yes 70947619
chr3 16832987 16832991 YY1 TRANSFAC yes 755718
chr3 16832987 16832991 YY1 TRANSFAC yes 70947620
chr3 16832999 16833014 MEF2A JASPAR yes 755719
chr3 16832999 16833014 MEF2A JASPAR yes 70947621
chr3 16833001 16833013 MEF2A JASPAR yes 755720
chr3 16833001 16833013 MEF2B JASPAR yes 755721
chr3 16833001 16833013 MEF2D JASPAR yes 755722
chr3 16833001 16833013 MEF2A JASPAR yes 70947622
chr3 16833001 16833013 MEF2B JASPAR yes 70947623
chr3 16833001 16833013 MEF2D JASPAR yes 70947624
chr3 16833002 16833012 MEF2A JASPAR yes 755723
chr3 16833002 16833012 MEF2A JASPAR yes 70947625
chr3 16833006 16833010 TEAD2 TRANSFAC yes 755724
chr3 16833006 16833010 TEAD2 TRANSFAC yes 70947626
chr3 16833019 16833023 NFE TRANSFAC yes 755725
chr3 16833019 16833023 NFE TRANSFAC yes 70947627
chr3 16833049 16833061 YY1 JASPAR yes 755726
chr3 16833049 16833061 YY1 JASPAR yes 70947628
chr3 16833052 16833058 YY1 JASPAR yes 755727
chr3 16833052 16833058 YY1 JASPAR yes 70947629
chr3 16833061 16833075 BATF3 JASPAR yes 755728
chr3 16833061 16833075 BATF3 JASPAR yes 70947630
chr3 16833089 16833093 LFA1 TRANSFAC yes 755729
chr3 16833089 16833093 LFA1 TRANSFAC yes 70947631
chr3 16833099 16833103 TEAD2 TRANSFAC yes 755730
chr3 16833099 16833103 TEAD2 TRANSFAC yes 70947632
SNP sites on vista40173[chr3:16832679-16833131]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr3 16832710 rs6442640 A T no 6584530
chr3 16832828 rs6442641 C T no 6584531
chr3 16832892 rs369291733 G GT
FOXP1 YY1
6584532
chr3 16832893 rs561774723 T G
FOXP1 YY1
6584533
chr3 16832944 rs117581401 G T no 6584534
Genes possibly regulated by vista40173[chr3:16832679-16833131]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr3 16844159 17132086 + PLCL2 ENSG00000154822.11 16844159 0.84 0.98 3454 88972
Expression level of Genes
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miRNAs possibly regulated by vista40173[chr3:16832679-16833131]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results