EnhancerDB
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  3. vista40174[chr3:16857663-16857805]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista40174[chr3:16857663-16857805]
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Tissue distribution of vista40174
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Transcription factor that possibly regulate vista40174[chr3:16857663-16857805]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr3 16857695 16857711 RFX2 JASPAR yes 757937
chr3 16857695 16857711 RFX3 JASPAR yes 757938
chr3 16857695 16857711 RFX4 JASPAR yes 757939
chr3 16857695 16857711 RFX5 JASPAR yes 757940
chr3 16857695 16857711 RFX2 JASPAR yes 70947633
chr3 16857695 16857711 RFX3 JASPAR yes 70947634
chr3 16857695 16857711 RFX4 JASPAR yes 70947635
chr3 16857695 16857711 RFX5 JASPAR yes 70947636
chr3 16857698 16857702 YY1 TRANSFAC yes 757941
chr3 16857698 16857702 YY1 TRANSFAC yes 70947637
chr3 16857718 16857727 NKX3-2 JASPAR yes 757942
chr3 16857718 16857727 NKX3-2 JASPAR yes 70947638
chr3 16857719 16857727 ISL2 JASPAR yes 757943
chr3 16857719 16857727 ISL2 JASPAR yes 70947639
chr3 16857730 16857748 MAFF JASPAR yes 757944
chr3 16857730 16857748 MAFF JASPAR yes 70947640
chr3 16857749 16857761 IRF1 JASPAR yes 757945
chr3 16857749 16857761 IRF1 JASPAR yes 70947641
chr3 16857754 16857758 YY1 TRANSFAC yes 757946
chr3 16857754 16857758 YY1 TRANSFAC yes 70947642
chr3 16857771 16857775 YY1 TRANSFAC yes 757947
chr3 16857771 16857775 YY1 TRANSFAC yes 70947643
SNP sites on vista40174[chr3:16857663-16857805]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr3 16857736 rs186340235 T C
MAFF
6584720
chr3 16857768 rs573332962 A G no 6584721
Genes possibly regulated by vista40174[chr3:16857663-16857805]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr3 16844159 17132086 + PLCL2 ENSG00000154822.11 16844159 0.84 0.98 3454 86496
Expression level of Genes
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miRNAs possibly regulated by vista40174[chr3:16857663-16857805]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results