EnhancerDB
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  3. vista40175[chr3:16880208-16880431]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista40175[chr3:16880208-16880431]
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Tissue distribution of vista40175
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Transcription factor that possibly regulate vista40175[chr3:16880208-16880431]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr3 16880198 16880213 HNF4A JASPAR yes 760417
chr3 16880198 16880213 HNF4A JASPAR yes 70947644
chr3 16880199 16880214 HNF4G JASPAR yes 760418
chr3 16880199 16880214 HNF4G JASPAR yes 70947645
chr3 16880203 16880209 TCF4 TRANSFAC yes 760419
chr3 16880203 16880209 TCF4 TRANSFAC yes 70947646
chr3 16880219 16880235 GLIS1 JASPAR yes 760420
chr3 16880219 16880235 GLIS1 JASPAR yes 70947647
chr3 16880229 16880244 MEF2A JASPAR yes 760421
chr3 16880229 16880244 MEF2A JASPAR yes 70947648
chr3 16880230 16880245 MEF2A JASPAR yes 760422
chr3 16880230 16880245 MEF2C JASPAR yes 760423
chr3 16880230 16880245 MEF2A JASPAR yes 70947649
chr3 16880230 16880245 MEF2C JASPAR yes 70947650
chr3 16880231 16880243 MEF2A JASPAR yes 760424
chr3 16880231 16880243 MEF2B JASPAR yes 760425
chr3 16880231 16880243 MEF2D JASPAR yes 760426
chr3 16880231 16880243 MEF2A JASPAR yes 70947651
chr3 16880231 16880243 MEF2B JASPAR yes 70947652
chr3 16880231 16880243 MEF2D JASPAR yes 70947653
chr3 16880232 16880242 MEF2A JASPAR yes 760427
chr3 16880232 16880242 MEF2A JASPAR yes 70947654
chr3 16880233 16880237 YY1 TRANSFAC yes 760428
chr3 16880233 16880237 YY1 TRANSFAC yes 70947655
chr3 16880259 16880280 REST JASPAR yes 760429
chr3 16880259 16880280 REST JASPAR yes 70947656
chr3 16880260 16880271 ESRRA JASPAR yes 760430
chr3 16880260 16880271 ESRRA JASPAR yes 70947657
chr3 16880260 16880273 NR2F1 JASPAR yes 760431
chr3 16880260 16880273 NR2F1 JASPAR yes 70947658
chr3 16880264 16880268 ESR1 TRANSFAC yes 760432
chr3 16880264 16880268 ESR1 TRANSFAC yes 70947659
chr3 16880266 16880277 ESRRA JASPAR yes 760433
chr3 16880266 16880277 ESRRA JASPAR yes 70947660
chr3 16880271 16880281 MYF6 JASPAR yes 760434
chr3 16880271 16880281 MYF6 JASPAR yes 70947661
chr3 16880273 16880278 MYC TRANSFAC yes 760435
chr3 16880273 16880278 MYC TRANSFAC yes 70947662
chr3 16880273 16880291 NFYA JASPAR yes 760436
chr3 16880273 16880291 NFYA JASPAR yes 70947663
chr3 16880285 16880289 ESR1 TRANSFAC yes 760437
chr3 16880285 16880289 ESR1 TRANSFAC yes 70947664
chr3 16880290 16880303 ZBTB18 JASPAR yes 760438
chr3 16880290 16880303 ZBTB18 JASPAR yes 70947665
chr3 16880291 16880303 NHLH1 JASPAR yes 760439
chr3 16880291 16880303 NHLH1 JASPAR yes 70947666
chr3 16880292 16880302 MSC JASPAR yes 760440
chr3 16880292 16880302 TFAP4 JASPAR yes 760441
chr3 16880292 16880302 MSC JASPAR yes 70947667
chr3 16880292 16880302 TFAP4 JASPAR yes 70947668
chr3 16880292 16880304 TAL1 JASPAR yes 760442
chr3 16880292 16880304 TAL1 JASPAR yes 70947669
chr3 16880293 16880306 SCRT2 JASPAR yes 760443
chr3 16880293 16880306 SCRT2 JASPAR yes 70947670
chr3 16880301 16880319 NFYA JASPAR yes 760444
chr3 16880301 16880319 NFYA JASPAR yes 70947671
chr3 16880304 16880320 NFYA JASPAR yes 760445
chr3 16880304 16880320 NFYA JASPAR yes 70947672
chr3 16880307 16880322 NFYB JASPAR yes 760446
chr3 16880307 16880322 NFYB JASPAR yes 70947673
chr3 16880309 16880314 NFY TRANSFAC yes 760447
chr3 16880309 16880314 NFY TRANSFAC yes 70947674
chr3 16880315 16880318 MYB TRANSFAC yes 760448
chr3 16880315 16880318 MYB TRANSFAC yes 70947675
chr3 16880324 16880332 TBX5 JASPAR yes 760449
chr3 16880324 16880332 TBX5 JASPAR yes 70947676
chr3 16880335 16880349 TLX1 JASPAR yes 760450
chr3 16880335 16880349 TLX1 JASPAR yes 70947677
chr3 16880337 16880343 YY1 JASPAR yes 760451
chr3 16880337 16880343 YY1 JASPAR yes 70947678
chr3 16880337 16880347 NEUROG2 JASPAR yes 760452
chr3 16880337 16880347 NEUROG2 JASPAR yes 70947679
chr3 16880355 16880359 H4TF2 TRANSFAC yes 760453
chr3 16880355 16880359 H4TF2 TRANSFAC yes 70947680
chr3 16880368 16880377 THAP1 JASPAR yes 760454
chr3 16880368 16880377 THAP1 JASPAR yes 70947681
chr3 16880375 16880379 YY1 TRANSFAC yes 760455
chr3 16880375 16880379 YY1 TRANSFAC yes 70947682
chr3 16880377 16880386 SRY JASPAR yes 760456
chr3 16880377 16880386 SRY JASPAR yes 70947683
chr3 16880382 16880399 BCL6B JASPAR yes 760457
chr3 16880382 16880399 BCL6B JASPAR yes 70947684
chr3 16880401 16880404 MYB TRANSFAC yes 760458
chr3 16880401 16880404 MYB TRANSFAC yes 70947685
chr3 16880425 16880437 GRHL1 JASPAR yes 760459
chr3 16880425 16880437 GRHL1 JASPAR yes 70947686
chr3 16880428 16880434 PTF TRANSFAC yes 760460
chr3 16880428 16880434 PTF TRANSFAC yes 70947687
SNP sites on vista40175[chr3:16880208-16880431]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr3 16880307 rs534587593 G A
NFYA NFYB
6584929
Genes possibly regulated by vista40175[chr3:16880208-16880431]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr3 16844159 17132086 + PLCL2 ENSG00000154822.11 16844159 0.84 0.98 3454 63951
Expression level of Genes
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miRNAs possibly regulated by vista40175[chr3:16880208-16880431]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results