EnhancerDB
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  3. vista4020[chr1:177216889-177217021]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista4020[chr1:177216889-177217021]
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Tissue distribution of vista4020
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Transcription factor that possibly regulate vista4020[chr1:177216889-177217021]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 177216897 177216903 MZF1 JASPAR yes 33349021
chr1 177216897 177216903 MZF1 JASPAR yes 118404749
chr1 177216905 177216910 GATA1 TRANSFAC yes 33349022
chr1 177216905 177216910 GATA1 TRANSFAC yes 118404750
chr1 177216911 177216926 STAT1 JASPAR yes 33349023
chr1 177216911 177216926 STAT1 JASPAR yes 118404751
chr1 177216913 177216924 STAT1 JASPAR yes 33349024
chr1 177216913 177216924 STAT3 JASPAR yes 33349025
chr1 177216913 177216924 STAT1 JASPAR yes 118404752
chr1 177216913 177216924 STAT3 JASPAR yes 118404753
chr1 177216938 177216956 NFYA JASPAR yes 33349026
chr1 177216938 177216956 NFYA JASPAR yes 118404754
chr1 177216939 177216944 SP1 TRANSFAC yes 33349027
chr1 177216939 177216944 SP1 TRANSFAC yes 118404755
chr1 177216941 177216957 NFYA JASPAR yes 33349028
chr1 177216941 177216957 NFYA JASPAR yes 118404756
chr1 177216944 177216959 NFYB JASPAR yes 33349029
chr1 177216944 177216959 NFYB JASPAR yes 118404757
chr1 177216946 177216951 NFY TRANSFAC yes 33349030
chr1 177216946 177216951 NFY TRANSFAC yes 118404758
chr1 177216969 177216983 ONECUT1 JASPAR yes 33349031
chr1 177216969 177216983 ONECUT2 JASPAR yes 33349032
chr1 177216969 177216983 ONECUT3 JASPAR yes 33349033
chr1 177216969 177216983 ONECUT1 JASPAR yes 118404759
chr1 177216969 177216983 ONECUT2 JASPAR yes 118404760
chr1 177216969 177216983 ONECUT3 JASPAR yes 118404761
chr1 177216975 177216980 H4TF1 TRANSFAC yes 33349034
chr1 177216975 177216980 H4TF1 TRANSFAC yes 118404762
chr1 177216976 177216984 FEV JASPAR yes 33349035
chr1 177216976 177216984 FEV JASPAR yes 118404763
chr1 177217014 177217020 PEA3 TRANSFAC yes 33349036
chr1 177217014 177217020 PEA3 TRANSFAC yes 118404764
chr1 177217019 177217029 MYF6 JASPAR yes 33349037
chr1 177217019 177217029 NEUROG2 JASPAR yes 33349038
chr1 177217019 177217029 MYF6 JASPAR yes 118404765
chr1 177217019 177217029 NEUROG2 JASPAR yes 118404766
SNP sites on vista4020[chr1:177216889-177217021]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 177216925 rs77441830 C T
STAT1
748264
chr1 177216941 rs149841792 G T
NFYA SP1
748265
Genes possibly regulated by vista4020[chr1:177216889-177217021]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 176826438 177134109 - ASTN1 ENSG00000152092.11 177134109 0.96 1.0 1595 17220
chr1 177140633 177251558 + BRINP2 ENSG00000198797.6 177140633 0.98 0.94 1596 23744
Expression level of Genes
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miRNAs possibly regulated by vista4020[chr1:177216889-177217021]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results