EnhancerDB
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  3. vista4023[chr1:177896186-177896486]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista4023[chr1:177896186-177896486]
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Tissue distribution of vista4023
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Transcription factor that possibly regulate vista4023[chr1:177896186-177896486]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 177896188 177896205 RARA JASPAR yes 33383074
chr1 177896188 177896205 RARA JASPAR yes 118404813
chr1 177896214 177896231 RARA JASPAR yes 33383075
chr1 177896214 177896231 RARA JASPAR yes 118404814
chr1 177896230 177896233 MYB TRANSFAC yes 33383076
chr1 177896230 177896233 MYB TRANSFAC yes 118404815
chr1 177896231 177896241 TEAD1 JASPAR yes 33383077
chr1 177896231 177896241 TEAD4 JASPAR yes 33383078
chr1 177896231 177896241 TEAD1 JASPAR yes 118404816
chr1 177896231 177896241 TEAD4 JASPAR yes 118404817
chr1 177896231 177896243 TEAD1 JASPAR yes 33383079
chr1 177896231 177896243 TEAD1 JASPAR yes 118404818
chr1 177896232 177896240 TEAD3 JASPAR yes 33383080
chr1 177896232 177896240 TEAD3 JASPAR yes 118404819
chr1 177896235 177896250 NFYB JASPAR yes 33383081
chr1 177896235 177896250 NFYB JASPAR yes 118404820
chr1 177896237 177896253 NFYA JASPAR yes 33383082
chr1 177896237 177896253 NFYA JASPAR yes 118404821
chr1 177896238 177896256 NFYA JASPAR yes 33383083
chr1 177896238 177896256 NFYA JASPAR yes 118404822
chr1 177896239 177896242 MYB TRANSFAC yes 33383084
chr1 177896239 177896242 MYB TRANSFAC yes 118404823
chr1 177896242 177896246 H1TF2 TRANSFAC yes 33383085
chr1 177896242 177896246 NFE TRANSFAC yes 33383086
chr1 177896242 177896246 SRF TRANSFAC yes 33383087
chr1 177896242 177896246 H1TF2 TRANSFAC yes 118404824
chr1 177896242 177896246 NFE TRANSFAC yes 118404825
chr1 177896242 177896246 SRF TRANSFAC yes 118404826
chr1 177896265 177896268 MYB TRANSFAC yes 33383088
chr1 177896265 177896268 MYB TRANSFAC yes 118404827
chr1 177896281 177896291 HOXC10 JASPAR yes 33383089
chr1 177896281 177896291 HOXD11 JASPAR yes 33383090
chr1 177896281 177896291 HOXC10 JASPAR yes 118404828
chr1 177896281 177896291 HOXD11 JASPAR yes 118404829
chr1 177896281 177896292 HOXC11 JASPAR yes 33383091
chr1 177896281 177896292 HOXC11 JASPAR yes 118404830
chr1 177896284 177896287 MYB TRANSFAC yes 33383092
chr1 177896284 177896287 MYB TRANSFAC yes 118404831
chr1 177896295 177896305 HINFP JASPAR yes 33383093
chr1 177896295 177896305 HINFP JASPAR yes 118404832
chr1 177896316 177896332 POU4F3 JASPAR yes 33383094
chr1 177896316 177896332 POU4F3 JASPAR yes 118404833
chr1 177896318 177896332 POU4F1 JASPAR yes 33383095
chr1 177896318 177896332 POU4F1 JASPAR yes 118404834
chr1 177896323 177896334 BATF JASPAR yes 33383096
chr1 177896323 177896334 BATF JASPAR yes 118404835
chr1 177896325 177896336 FOS JASPAR yes 33383097
chr1 177896325 177896336 JUND JASPAR yes 33383098
chr1 177896325 177896336 FOS JASPAR yes 118404836
chr1 177896325 177896336 JUND JASPAR yes 118404837
chr1 177896326 177896337 FOSL2 JASPAR yes 33383099
chr1 177896326 177896337 JUNB JASPAR yes 33383100
chr1 177896326 177896337 FOSL2 JASPAR yes 118404838
chr1 177896326 177896337 JUNB JASPAR yes 118404839
chr1 177896326 177896340 JUN JASPAR yes 33383101
chr1 177896326 177896340 JUN JASPAR yes 118404840
chr1 177896327 177896333 JUN TRANSFAC yes 33383102
chr1 177896327 177896333 JUN TRANSFAC yes 118404841
chr1 177896331 177896345 FOXF2 JASPAR yes 33383103
chr1 177896331 177896345 FOXF2 JASPAR yes 118404842
chr1 177896334 177896346 FOXI1 JASPAR yes 33383104
chr1 177896334 177896346 FOXI1 JASPAR yes 118404843
chr1 177896336 177896344 FOXG1 JASPAR yes 33383105
chr1 177896336 177896344 FOXG1 JASPAR yes 118404844
chr1 177896357 177896365 EHF JASPAR yes 33383106
chr1 177896357 177896365 EHF JASPAR yes 118404845
chr1 177896379 177896386 JUN TRANSFAC yes 33383107
chr1 177896379 177896386 JUN TRANSFAC yes 118404846
chr1 177896383 177896393 GABPA JASPAR yes 33383108
chr1 177896383 177896393 GABPA JASPAR yes 118404847
chr1 177896383 177896396 ELF1 JASPAR yes 33383109
chr1 177896383 177896396 ELF1 JASPAR yes 118404848
chr1 177896386 177896393 SPIB JASPAR yes 33383110
chr1 177896386 177896393 SPIB JASPAR yes 118404849
chr1 177896419 177896424 ETS2 TRANSFAC yes 118404850
chr1 177896435 177896445 HMBOX1 JASPAR yes 118404851
chr1 177896437 177896440 MYB TRANSFAC yes 118404852
chr1 177896456 177896462 LEF1 TRANSFAC yes 118404853
chr1 177896456 177896462 SOX10 JASPAR yes 118404854
SNP sites on vista4023[chr1:177896186-177896486]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 177896226 rs181593700 G A
RARA
751464
chr1 177896276 rs143483330 T C no 751465
chr1 177896288 rs148035719 C T
HOXC10 HOXC11 HOXD11
751466
chr1 177896355 rs141715612 C T no 751467
chr1 177896382 rs147190831 G A
JUN
751468
chr1 177896389 rs140660532 C T
ELF1 GABPA SPIB
751469
Genes possibly regulated by vista4023[chr1:177896186-177896486]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 177893091 177953438 - SEC16B ENSG00000120341.14 177953438 0.89 0.97 1597 43048
Expression level of Genes
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miRNAs possibly regulated by vista4023[chr1:177896186-177896486]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results