EnhancerDB
  1. Home
  2. Enhancers
  3. vista4040[chr1:178575191-178575363]
View enhancers around input chromosomal region
Back to top

Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista4040[chr1:178575191-178575363]
Back to top
Tissue distribution of vista4040
Back to top
Transcription factor that possibly regulate vista4040[chr1:178575191-178575363]
Back to top
Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 178575181 178575192 NFKB1 JASPAR yes 33427519
chr1 178575181 178575192 NFKB1 JASPAR yes 118405558
chr1 178575193 178575208 IRF9 JASPAR yes 33427520
chr1 178575193 178575208 IRF9 JASPAR yes 118405559
chr1 178575207 178575221 TCF7L2 JASPAR yes 33427521
chr1 178575207 178575221 TCF7L2 JASPAR yes 118405560
chr1 178575214 178575217 MYB TRANSFAC yes 33427522
chr1 178575214 178575217 MYB TRANSFAC yes 118405561
chr1 178575220 178575234 RORA JASPAR yes 33427523
chr1 178575220 178575234 RORA JASPAR yes 118405562
chr1 178575243 178575258 ZIC3 JASPAR yes 33427524
chr1 178575243 178575258 ZIC3 JASPAR yes 118405563
chr1 178575244 178575258 ZIC1 JASPAR yes 33427525
chr1 178575244 178575258 ZIC1 JASPAR yes 118405564
chr1 178575249 178575257 EHF JASPAR yes 33427526
chr1 178575249 178575257 EHF JASPAR yes 118405565
chr1 178575251 178575261 REL JASPAR yes 33427527
chr1 178575251 178575261 REL JASPAR yes 118405566
chr1 178575273 178575283 SREBF1 JASPAR yes 33427528
chr1 178575273 178575283 SREBF1 JASPAR yes 118405567
chr1 178575300 178575312 NHLH1 JASPAR yes 33427529
chr1 178575300 178575312 NHLH1 JASPAR yes 118405568
chr1 178575301 178575311 MSC JASPAR yes 33427530
chr1 178575301 178575311 NHLH1 JASPAR yes 33427531
chr1 178575301 178575311 TFAP4 JASPAR yes 33427532
chr1 178575301 178575311 MSC JASPAR yes 118405569
chr1 178575301 178575311 NHLH1 JASPAR yes 118405570
chr1 178575301 178575311 TFAP4 JASPAR yes 118405571
chr1 178575311 178575326 MEF2A JASPAR yes 33427533
chr1 178575311 178575326 MEF2A JASPAR yes 118405572
chr1 178575312 178575327 MEF2C JASPAR yes 33427534
chr1 178575312 178575327 MEF2C JASPAR yes 118405573
chr1 178575313 178575325 MEF2A JASPAR yes 33427535
chr1 178575313 178575325 MEF2B JASPAR yes 33427536
chr1 178575313 178575325 MEF2D JASPAR yes 33427537
chr1 178575313 178575325 MEF2A JASPAR yes 118405574
chr1 178575313 178575325 MEF2B JASPAR yes 118405575
chr1 178575313 178575325 MEF2D JASPAR yes 118405576
chr1 178575314 178575324 MEF2A JASPAR yes 33427538
chr1 178575314 178575324 MEF2A JASPAR yes 118405577
chr1 178575363 178575383 RREB1 JASPAR yes 33427539
chr1 178575363 178575383 RREB1 JASPAR yes 118405578
SNP sites on vista4040[chr1:178575191-178575363]
Back to top
chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 178575265 rs2476557 C T no 755004
Genes possibly regulated by vista4040[chr1:178575191-178575363]
Back to top
Details of Genes
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 178482212 178517734 + TEX35 ENSG00000240021.5 178482212 0.92 0.85 1599 7021
chr1 178511887 178518024 + C1orf220 ENSG00000213057.4 178511887 0.85 0.95 1600 36696
chr1 178511950 178517579 + C1ORF220 ENSG00000184909.8 178511950 0.95 0.99 1601 36759
Expression level of Genes
Back to top
miRNAs possibly regulated by vista4040[chr1:178575191-178575363]
Back to top
Details of miRNAs
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
Back to top
No results