EnhancerDB
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  3. vista4067[chr1:180200315-180200683]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista4067[chr1:180200315-180200683]
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Tissue distribution of vista4067
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Transcription factor that possibly regulate vista4067[chr1:180200315-180200683]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 180199515 180206254 EZH2 UCSC Txn Factor no Conserved 107847685
chr1 180199515 180206254 EZH2 UCSC Txn Factor no Conserved 107847686
chr1 180199923 180201142 E2F1 UCSC Txn Factor no Conserved 107847690
chr1 180199923 180201142 E2F1 UCSC Txn Factor no Conserved 107847691
chr1 180200250 180200456 TEAD4 UCSC Txn Factor no Conserved 107847714
chr1 180200338 180200348 TEAD1 JASPAR yes 118406695
chr1 180200338 180200348 TEAD4 JASPAR yes 118406696
chr1 180200338 180200350 TEAD1 JASPAR yes 118406697
chr1 180200339 180200347 TEAD3 JASPAR yes 118406698
chr1 180200352 180200364 TEAD1 JASPAR yes 118406699
chr1 180200354 180200364 TEAD1 JASPAR yes 118406700
chr1 180200354 180200375 ZNF263 JASPAR yes 118406701
chr1 180200355 180200363 TEAD3 JASPAR yes 118406702
chr1 180200357 180200378 ZNF263 JASPAR yes 118406703
chr1 180200358 180200379 ZNF263 JASPAR yes 118406704
chr1 180200365 180200371 MAZ TRANSFAC yes 118406705
chr1 180200365 180200376 E2F6 JASPAR yes 118406706
chr1 180200384 180200394 TBX21 JASPAR yes 118406707
chr1 180200384 180200395 TBX20 JASPAR yes 118406708
chr1 180200390 180200403 ELF3 JASPAR yes 118406709
chr1 180200391 180200403 EHF JASPAR yes 118406710
chr1 180200391 180200403 ELF4 JASPAR yes 118406711
chr1 180200421 180200425 LFA1 TRANSFAC yes 118406712
chr1 180200422 180200431 SNAI2 JASPAR yes 118406713
chr1 180200422 180200432 ID4 JASPAR yes 118406714
chr1 180200422 180200432 NHLH1 JASPAR yes 118406715
chr1 180200422 180200432 TCF3 JASPAR yes 118406716
chr1 180200422 180200432 TCF4 JASPAR yes 118406717
chr1 180200449 180200459 MZF1 JASPAR yes 118406718
chr1 180200463 180200477 PLAG1 JASPAR yes 118406719
chr1 180200478 180200484 TCF4 TRANSFAC yes 118406720
chr1 180200488 180200497 THAP1 JASPAR yes 118406721
chr1 180200490 180200497 SP1 TRANSFAC yes 118406722
chr1 180200492 180200497 SP1 TRANSFAC yes 118406723
chr1 180200502 180200513 E2F4 JASPAR yes 118406724
chr1 180200502 180200513 E2F6 JASPAR yes 118406725
chr1 180200503 180200514 E2F1 JASPAR yes 118406726
chr1 180200517 180200525 HOXA5 JASPAR yes 118406727
chr1 180200544 180200555 FOXP2 JASPAR yes 118406728
chr1 180200544 180200558 FOXF2 JASPAR yes 118406729
chr1 180200545 180200553 FOXG1 JASPAR yes 118406730
chr1 180200550 180200555 GATA2 JASPAR yes 118406731
chr1 180200552 180200558 MZF1 JASPAR yes 118406732
chr1 180200642 180200655 TFAP2B JASPAR yes 118406733
chr1 180200642 180200655 TFAP2C JASPAR yes 118406734
chr1 180200656 180200671 HNF4G JASPAR yes 118406735
chr1 180200657 180200671 NR2F1 JASPAR yes 118406736
chr1 180200657 180200672 HNF4A JASPAR yes 118406737
chr1 180200672 180200681 SNAI2 JASPAR yes 118406738
chr1 180200672 180200682 ID4 JASPAR yes 118406739
chr1 180200672 180200682 TCF3 JASPAR yes 118406740
chr1 180200672 180200682 TCF4 JASPAR yes 118406741
SNP sites on vista4067[chr1:180200315-180200683]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 180200368 rs190407127 G C
E2F1 E2F6 EZH2 MAZ TEAD4 ZNF263
762979
chr1 180200465 rs355626 G C
E2F1 EZH2 PLAG1
762980
Genes possibly regulated by vista4067[chr1:180200315-180200683]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 180123969 180173165 + QSOX1 ENSG00000116260.12 180123969 0.77 1.0 1617 23654
chr1 180199421 180249380 + LHX4 ENSG00000121454.4 180199421 0.79 0.99 1618 99106
Expression level of Genes
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miRNAs possibly regulated by vista4067[chr1:180200315-180200683]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results