EnhancerDB
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  3. vista4068[chr1:180200686-180200867]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista4068[chr1:180200686-180200867]
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Tissue distribution of vista4068
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Transcription factor that possibly regulate vista4068[chr1:180200686-180200867]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 180199515 180206254 EZH2 UCSC Txn Factor no Conserved 107847685
chr1 180199515 180206254 EZH2 UCSC Txn Factor no Conserved 107847686
chr1 180199923 180201142 E2F1 UCSC Txn Factor no Conserved 107847690
chr1 180199923 180201142 E2F1 UCSC Txn Factor no Conserved 107847691
chr1 180200731 180201155 CTCF UCSC Txn Factor no Conserved 107847733
chr1 180200689 180200700 NRF1 JASPAR yes 118406742
chr1 180200690 180200701 NRF1 JASPAR yes 118406743
chr1 180200691 180200702 NRF1 JASPAR yes 118406744
chr1 180200692 180200703 NRF1 JASPAR yes 118406745
chr1 180200693 180200704 NRF1 JASPAR yes 118406746
chr1 180200694 180200705 NRF1 JASPAR yes 118406747
chr1 180200695 180200706 NRF1 JASPAR yes 118406748
chr1 180200696 180200707 NRF1 JASPAR yes 118406749
chr1 180200697 180200708 NRF1 JASPAR yes 118406750
chr1 180200698 180200709 NRF1 JASPAR yes 118406751
chr1 180200699 180200710 NRF1 JASPAR yes 118406752
chr1 180200700 180200711 NRF1 JASPAR yes 118406753
chr1 180200701 180200712 NRF1 JASPAR yes 118406754
chr1 180200702 180200713 NRF1 JASPAR yes 118406755
chr1 180200731 180200737 NFE2 TRANSFAC yes 118406756
chr1 180200732 180200745 TFAP2A JASPAR yes 118406757
chr1 180200732 180200745 TFAP2B JASPAR yes 118406758
chr1 180200732 180200747 RUNX2 JASPAR yes 118406759
chr1 180200750 180200765 ZIC3 JASPAR yes 118406760
chr1 180200750 180200765 ZIC4 JASPAR yes 118406761
chr1 180200751 180200765 ZIC1 JASPAR yes 118406762
chr1 180200761 180200772 TFAP2A JASPAR yes 118406763
chr1 180200761 180200772 TFAP2B JASPAR yes 118406764
chr1 180200761 180200772 TFAP2C JASPAR yes 118406765
chr1 180200762 180200771 TFAP2A JASPAR yes 118406766
chr1 180200765 180200786 REST JASPAR yes 118406767
chr1 180200766 180200785 REST JASPAR yes 118406768
chr1 180200767 180200771 LFA1 TRANSFAC yes 118406769
chr1 180200771 180200782 EBF1 JASPAR yes 118406770
chr1 180200803 180200812 NFIX JASPAR yes 118406771
chr1 180200805 180200811 NFIC JASPAR yes 118406772
chr1 180200817 180200827 HINFP JASPAR yes 118406773
chr1 180200817 180200828 ELK4 JASPAR yes 118406774
chr1 180200817 180200830 ELF3 JASPAR yes 118406775
chr1 180200818 180200828 ELK1 JASPAR yes 118406776
chr1 180200818 180200828 ELK3 JASPAR yes 118406777
chr1 180200818 180200828 ETV1 JASPAR yes 118406778
chr1 180200818 180200828 ETV4 JASPAR yes 118406779
chr1 180200818 180200828 ETV5 JASPAR yes 118406780
chr1 180200818 180200828 ETV6 JASPAR yes 118406781
chr1 180200818 180200829 ELF5 JASPAR yes 118406782
chr1 180200818 180200830 EHF JASPAR yes 118406783
chr1 180200818 180200830 ELF1 JASPAR yes 118406784
chr1 180200818 180200830 ELF4 JASPAR yes 118406785
chr1 180200818 180200831 ELF1 JASPAR yes 118406786
chr1 180200820 180200826 ETS1 JASPAR yes 118406787
chr1 180200820 180200826 SPI1 JASPAR yes 118406788
SNP sites on vista4068[chr1:180200686-180200867]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 180200689 rs3041737 TCG T
E2F1 EZH2 NRF1
762981
chr1 180200689 rs3063977 TCG T
E2F1 EZH2 NRF1
762982
chr1 180200689 rs764874211 TCG T
E2F1 EZH2 NRF1
762983
chr1 180200689 rs796715890 TCG T
E2F1 EZH2 NRF1
762984
chr1 180200729 rs537571243 G A
E2F1 EZH2
762985
chr1 180200816 rs145031224 T C
CTCF E2F1 EZH2
762986
Genes possibly regulated by vista4068[chr1:180200686-180200867]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 180123969 180173165 + QSOX1 ENSG00000116260.12 180123969 0.77 1.0 1617 23283
chr1 180199421 180249380 + LHX4 ENSG00000121454.4 180199421 0.79 0.99 1618 98735
Expression level of Genes
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miRNAs possibly regulated by vista4068[chr1:180200686-180200867]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results