EnhancerDB
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  3. vista4075[chr1:180389473-180389640]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista4075[chr1:180389473-180389640]
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Tissue distribution of vista4075
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Transcription factor that possibly regulate vista4075[chr1:180389473-180389640]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 180389483 180389494 HOXA10 JASPAR yes 118406961
chr1 180389484 180389493 CDX1 JASPAR yes 118406962
chr1 180389484 180389495 CDX2 JASPAR yes 118406963
chr1 180389487 180389500 ATF4 JASPAR yes 118406964
chr1 180389487 180389502 TFAP2C JASPAR yes 118406965
chr1 180389490 180389501 TFAP2A JASPAR yes 118406966
chr1 180389490 180389501 TFAP2B JASPAR yes 118406967
chr1 180389490 180389501 TFAP2C JASPAR yes 118406968
chr1 180389493 180389507 PAX6 JASPAR yes 118406969
chr1 180389513 180389532 RFX2 JASPAR yes 118406970
chr1 180389517 180389533 RFX2 JASPAR yes 118406971
chr1 180389517 180389533 RFX3 JASPAR yes 118406972
chr1 180389517 180389533 RFX4 JASPAR yes 118406973
chr1 180389517 180389533 RFX5 JASPAR yes 118406974
chr1 180389523 180389527 TEAD2 TRANSFAC yes 118406975
chr1 180389525 180389539 BATF3 JASPAR yes 118406976
chr1 180389527 180389535 MEIS2 JASPAR yes 118406977
chr1 180389527 180389535 MEIS3 JASPAR yes 118406978
chr1 180389539 180389543 H1TF2 TRANSFAC yes 118406979
chr1 180389539 180389543 NFE TRANSFAC yes 118406980
chr1 180389539 180389543 SRF TRANSFAC yes 118406981
chr1 180389545 180389558 HSF4 JASPAR yes 118406982
chr1 180389570 180389574 NFE TRANSFAC yes 118406983
chr1 180389571 180389589 IRF2 JASPAR yes 118406984
chr1 180389576 180389590 IRF8 JASPAR yes 118406985
chr1 180389620 180389631 FOXH1 JASPAR yes 118406986
chr1 180389623 180389633 POU6F2 JASPAR yes 118406987
SNP sites on vista4075[chr1:180389473-180389640]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 180389513 rs574865352 A C
RFX2
763816
chr1 180389515 rs192179975 C T
RFX2
763817
chr1 180389519 rs55723772 G A
RFX2 RFX3 RFX4 RFX5
763818
chr1 180389583 rs58448569 T C
IRF2 IRF8
763819
chr1 180389587 rs77778479 T C
IRF2 IRF8
763820
chr1 180389621 rs61811602 T C
FOXH1
763821
Genes possibly regulated by vista4075[chr1:180389473-180389640]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 180244515 180472089 - ACBD6 ENSG00000135847.5 180472089 0.57 1.0 1619 17551
Expression level of Genes
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miRNAs possibly regulated by vista4075[chr1:180389473-180389640]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results