EnhancerDB
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  3. vista4078[chr1:180508329-180508738]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista4078[chr1:180508329-180508738]
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Tissue distribution of vista4078
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Transcription factor that possibly regulate vista4078[chr1:180508329-180508738]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 180508348 180508362 GATA2 JASPAR yes 33522670
chr1 180508348 180508362 GATA2 JASPAR yes 118407025
chr1 180508349 180508353 YY1 TRANSFAC yes 33522671
chr1 180508349 180508353 YY1 TRANSFAC yes 118407026
chr1 180508352 180508360 GATA3 JASPAR yes 33522672
chr1 180508352 180508360 GATA3 JASPAR yes 118407027
chr1 180508370 180508381 NFIL3 JASPAR yes 33522673
chr1 180508370 180508381 NFIL3 JASPAR yes 118407028
chr1 180508399 180508414 FOXP1 JASPAR yes 33522674
chr1 180508399 180508414 FOXP1 JASPAR yes 118407029
chr1 180508399 180508420 IRF1 JASPAR yes 33522675
chr1 180508399 180508420 IRF1 JASPAR yes 118407030
chr1 180508400 180508415 FOXP1 JASPAR yes 33522676
chr1 180508400 180508415 FOXP1 JASPAR yes 118407031
chr1 180508401 180508406 ETS2 TRANSFAC yes 33522677
chr1 180508401 180508406 ETS2 TRANSFAC yes 118407032
chr1 180508403 180508418 PRDM1 JASPAR yes 33522678
chr1 180508403 180508418 STAT2 JASPAR yes 33522679
chr1 180508403 180508418 PRDM1 JASPAR yes 118407033
chr1 180508403 180508418 STAT2 JASPAR yes 118407034
chr1 180508403 180508421 NR3C1 JASPAR yes 33522680
chr1 180508403 180508421 NR3C1 JASPAR yes 118407035
chr1 180508423 180508427 YY1 TRANSFAC yes 33522681
chr1 180508423 180508427 YY1 TRANSFAC yes 118407036
chr1 180508461 180508465 H1TF2 TRANSFAC yes 33522682
chr1 180508461 180508465 NFE TRANSFAC yes 33522683
chr1 180508461 180508465 SRF TRANSFAC yes 33522684
chr1 180508461 180508465 H1TF2 TRANSFAC yes 118407037
chr1 180508461 180508465 NFE TRANSFAC yes 118407038
chr1 180508461 180508465 SRF TRANSFAC yes 118407039
chr1 180508473 180508478 MYC TRANSFAC yes 33522685
chr1 180508473 180508478 MYC TRANSFAC yes 118407040
chr1 180508511 180508523 MEF2A JASPAR yes 33522686
chr1 180508511 180508523 MEF2B JASPAR yes 33522687
chr1 180508511 180508523 MEF2D JASPAR yes 33522688
chr1 180508511 180508523 MEF2A JASPAR yes 118407041
chr1 180508511 180508523 MEF2B JASPAR yes 118407042
chr1 180508511 180508523 MEF2D JASPAR yes 118407043
chr1 180508512 180508522 MEF2A JASPAR yes 33522689
chr1 180508512 180508522 MEF2A JASPAR yes 118407044
chr1 180508513 180508517 TEAD2 TRANSFAC yes 33522690
chr1 180508513 180508517 TEAD2 TRANSFAC yes 118407045
chr1 180508513 180508523 ALX3 JASPAR yes 33522691
chr1 180508513 180508523 HOXB2 JASPAR yes 33522692
chr1 180508513 180508523 MNX1 JASPAR yes 33522693
chr1 180508513 180508523 ALX3 JASPAR yes 118407046
chr1 180508513 180508523 HOXB2 JASPAR yes 118407047
chr1 180508513 180508523 MNX1 JASPAR yes 118407048
chr1 180508514 180508522 LMX1A JASPAR yes 33522694
chr1 180508514 180508522 LMX1B JASPAR yes 33522695
chr1 180508514 180508522 NKX6-1 JASPAR yes 33522696
chr1 180508514 180508522 NKX6-2 JASPAR yes 33522697
chr1 180508514 180508522 VAX1 JASPAR yes 33522698
chr1 180508514 180508522 VAX2 JASPAR yes 33522699
chr1 180508514 180508522 VSX1 JASPAR yes 33522700
chr1 180508514 180508522 VSX2 JASPAR yes 33522701
chr1 180508514 180508522 LMX1A JASPAR yes 118407049
chr1 180508514 180508522 LMX1B JASPAR yes 118407050
chr1 180508514 180508522 NKX6-1 JASPAR yes 118407051
chr1 180508514 180508522 NKX6-2 JASPAR yes 118407052
chr1 180508514 180508522 VAX1 JASPAR yes 118407053
chr1 180508514 180508522 VAX2 JASPAR yes 118407054
chr1 180508514 180508522 VSX1 JASPAR yes 118407055
chr1 180508514 180508522 VSX2 JASPAR yes 118407056
chr1 180508514 180508524 POU6F2 JASPAR yes 33522702
chr1 180508514 180508524 POU6F2 JASPAR yes 118407057
chr1 180508519 180508522 MYB TRANSFAC yes 33522703
chr1 180508519 180508522 MYB TRANSFAC yes 118407058
chr1 180508528 180508540 NHLH1 JASPAR yes 33522704
chr1 180508528 180508540 NHLH1 JASPAR yes 118407059
chr1 180508529 180508539 NHLH1 JASPAR yes 33522705
chr1 180508529 180508539 TFAP4 JASPAR yes 33522706
chr1 180508529 180508539 NHLH1 JASPAR yes 118407060
chr1 180508529 180508539 TFAP4 JASPAR yes 118407061
chr1 180508547 180508551 NFE TRANSFAC yes 33522707
chr1 180508547 180508551 NFE TRANSFAC yes 118407062
chr1 180508555 180508566 NFKB1 JASPAR yes 33522708
chr1 180508555 180508566 NFKB1 JASPAR yes 118407063
chr1 180508565 180508578 POU2F2 JASPAR yes 33522709
chr1 180508565 180508578 POU2F2 JASPAR yes 118407064
chr1 180508578 180508588 RELA JASPAR yes 33522710
chr1 180508578 180508588 RELA JASPAR yes 118407065
chr1 180508579 180508590 NFKB1 JASPAR yes 33522711
chr1 180508579 180508590 NFKB1 JASPAR yes 118407066
chr1 180508583 180508594 STAT3 JASPAR yes 33522712
chr1 180508583 180508594 STAT3 JASPAR yes 118407067
chr1 180508585 180508597 NHLH1 JASPAR yes 33522713
chr1 180508585 180508597 NHLH1 JASPAR yes 118407068
chr1 180508586 180508596 NHLH1 JASPAR yes 33522714
chr1 180508586 180508596 NHLH1 JASPAR yes 118407069
chr1 180508617 180508627 NFKB1 JASPAR yes 33522715
chr1 180508617 180508627 RELA JASPAR yes 33522716
chr1 180508617 180508627 REL JASPAR yes 33522717
chr1 180508617 180508627 NFKB1 JASPAR yes 118407070
chr1 180508617 180508627 RELA JASPAR yes 118407071
chr1 180508617 180508627 REL JASPAR yes 118407072
chr1 180508617 180508628 NFKB1 JASPAR yes 33522718
chr1 180508617 180508628 NFKB1 JASPAR yes 118407073
chr1 180508621 180508628 NFATC2 JASPAR yes 33522719
chr1 180508621 180508628 NFATC2 JASPAR yes 118407074
chr1 180508637 180508641 NFE TRANSFAC yes 33522720
chr1 180508637 180508641 NFE TRANSFAC yes 118407075
chr1 180508639 180508649 HOXC10 JASPAR yes 33522721
chr1 180508639 180508649 HOXD11 JASPAR yes 33522722
chr1 180508639 180508649 HOXC10 JASPAR yes 118407076
chr1 180508639 180508649 HOXD11 JASPAR yes 118407077
chr1 180508639 180508655 POU4F2 JASPAR yes 33522723
chr1 180508639 180508655 POU4F3 JASPAR yes 33522724
chr1 180508639 180508655 POU4F2 JASPAR yes 118407078
chr1 180508639 180508655 POU4F3 JASPAR yes 118407079
chr1 180508641 180508645 YY1 TRANSFAC yes 33522725
chr1 180508641 180508645 YY1 TRANSFAC yes 118407080
chr1 180508641 180508655 POU4F1 JASPAR yes 33522726
chr1 180508641 180508655 POU4F1 JASPAR yes 118407081
chr1 180508648 180508652 YY1 TRANSFAC yes 33522727
chr1 180508648 180508652 YY1 TRANSFAC yes 118407082
chr1 180508656 180508671 ZIC3 JASPAR yes 33522728
chr1 180508656 180508671 ZIC4 JASPAR yes 33522729
chr1 180508656 180508671 ZIC3 JASPAR yes 118407083
chr1 180508656 180508671 ZIC4 JASPAR yes 118407084
chr1 180508657 180508671 GLIS2 JASPAR yes 33522730
chr1 180508657 180508671 GLIS3 JASPAR yes 33522731
chr1 180508657 180508671 ZIC1 JASPAR yes 33522732
chr1 180508657 180508671 GLIS2 JASPAR yes 118407085
chr1 180508657 180508671 GLIS3 JASPAR yes 118407086
chr1 180508657 180508671 ZIC1 JASPAR yes 118407087
chr1 180508667 180508671 ESR1 TRANSFAC yes 33522733
chr1 180508667 180508671 ESR1 TRANSFAC yes 118407088
chr1 180508667 180508677 EMX1 JASPAR yes 33522734
chr1 180508667 180508677 EVX1 JASPAR yes 33522735
chr1 180508667 180508677 EVX2 JASPAR yes 33522736
chr1 180508667 180508677 EMX1 JASPAR yes 118407089
chr1 180508667 180508677 EVX1 JASPAR yes 118407090
chr1 180508667 180508677 EVX2 JASPAR yes 118407091
chr1 180508670 180508674 YY1 TRANSFAC yes 33522737
chr1 180508670 180508674 YY1 TRANSFAC yes 118407092
chr1 180508672 180508690 ESR1 JASPAR yes 33522738
chr1 180508672 180508690 ESR1 JASPAR yes 118407093
chr1 180508708 180508712 YY1 TRANSFAC yes 33522739
chr1 180508708 180508712 YY1 TRANSFAC yes 118407094
chr1 180508718 180508724 ZNF354C JASPAR yes 33522740
chr1 180508718 180508724 ZNF354C JASPAR yes 118407095
SNP sites on vista4078[chr1:180508329-180508738]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 180508345 rs116547055 C T no 764496
chr1 180508405 rs112263139 GA G
ETS2 FOXP1 IRF1 NR3C1 PRDM1 STAT2
764497
chr1 180508505 rs74367579 A C no 764498
Genes possibly regulated by vista4078[chr1:180508329-180508738]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 180244515 180472089 - ACBD6 ENSG00000135847.5 180472089 0.57 1.0 1619 63760
chr1 180601140 180859387 + XPR1 ENSG00000143324.9 180601140 0.76 0.99 1620 7598
Expression level of Genes
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miRNAs possibly regulated by vista4078[chr1:180508329-180508738]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results