EnhancerDB
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  3. vista408[chr1:12544374-12544691]
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista408[chr1:12544374-12544691]
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Tissue distribution of vista408
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Transcription factor that possibly regulate vista408[chr1:12544374-12544691]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 12544411 12544416 GATA2 JASPAR yes 26824782
chr1 12544411 12544416 GATA2 JASPAR yes 118233172
chr1 12544417 12544432 SOX21 JASPAR yes 26824783
chr1 12544417 12544432 SOX21 JASPAR yes 118233173
chr1 12544418 12544422 H1TF2 TRANSFAC yes 26824784
chr1 12544418 12544422 NFE TRANSFAC yes 26824785
chr1 12544418 12544422 SRF TRANSFAC yes 26824786
chr1 12544418 12544422 H1TF2 TRANSFAC yes 118233174
chr1 12544418 12544422 NFE TRANSFAC yes 118233175
chr1 12544418 12544422 SRF TRANSFAC yes 118233176
chr1 12544438 12544449 HOXA10 JASPAR yes 26824787
chr1 12544438 12544449 HOXA10 JASPAR yes 118233177
chr1 12544444 12544462 SRF JASPAR yes 26824788
chr1 12544444 12544462 SRF JASPAR yes 118233178
chr1 12544516 12544529 POU2F2 JASPAR yes 26824789
chr1 12544516 12544529 POU2F2 JASPAR yes 118233179
chr1 12544524 12544528 YY1 TRANSFAC yes 26824790
chr1 12544524 12544528 YY1 TRANSFAC yes 118233180
chr1 12544528 12544541 EOMES JASPAR yes 26824791
chr1 12544528 12544541 EOMES JASPAR yes 118233181
chr1 12544531 12544541 SREBF1 JASPAR yes 26824792
chr1 12544531 12544541 SREBF2 JASPAR yes 26824793
chr1 12544531 12544541 TBX21 JASPAR yes 26824794
chr1 12544531 12544541 SREBF1 JASPAR yes 118233182
chr1 12544531 12544541 SREBF2 JASPAR yes 118233183
chr1 12544531 12544541 TBX21 JASPAR yes 118233184
chr1 12544532 12544540 MGA JASPAR yes 26824795
chr1 12544532 12544540 MGA JASPAR yes 118233185
chr1 12544555 12544570 AR JASPAR yes 26824796
chr1 12544555 12544570 AR JASPAR yes 118233186
chr1 12544565 12544585 PPARG JASPAR yes 26824797
chr1 12544565 12544585 PPARG JASPAR yes 118233187
chr1 12544566 12544584 ESR1 JASPAR yes 26824798
chr1 12544566 12544584 ESR1 JASPAR yes 118233188
chr1 12544568 12544583 ESR2 JASPAR yes 26824799
chr1 12544568 12544583 ESR2 JASPAR yes 118233189
chr1 12544585 12544603 IRF2 JASPAR yes 26824800
chr1 12544585 12544603 IRF2 JASPAR yes 118233190
chr1 12544590 12544602 IRF1 JASPAR yes 26824801
chr1 12544590 12544602 IRF1 JASPAR yes 118233191
chr1 12544622 12544636 IRF7 JASPAR yes 26824802
chr1 12544622 12544636 IRF7 JASPAR yes 118233192
chr1 12544645 12544656 ELF5 JASPAR yes 26824803
chr1 12544645 12544656 ELF5 JASPAR yes 118233193
chr1 12544645 12544659 SPIC JASPAR yes 26824804
chr1 12544645 12544659 SPIC JASPAR yes 118233194
chr1 12544646 12544653 SPI1 JASPAR yes 26824805
chr1 12544646 12544653 SPI1 JASPAR yes 118233195
chr1 12544646 12544654 FEV JASPAR yes 26824806
chr1 12544646 12544654 FEV JASPAR yes 118233196
chr1 12544648 12544653 ETS2 TRANSFAC yes 26824807
chr1 12544648 12544653 ETS2 TRANSFAC yes 118233197
SNP sites on vista408[chr1:12544374-12544691]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 12544383 rs200841994 CT C no 85858
chr1 12544386 rs369992776 C A no 85859
chr1 12544538 rs137946314 C T
EOMES MGA SREBF1 SREBF2 TBX21
85860
chr1 12544682 rs118011277 C G no 85861
Genes possibly regulated by vista408[chr1:12544374-12544691]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
Expression level of Genes
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No results
miRNAs possibly regulated by vista408[chr1:12544374-12544691]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results