EnhancerDB
  1. Home
  2. Enhancers
  3. vista4080[chr1:180562543-180562696]
View enhancers around input chromosomal region
Back to top

Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista4080[chr1:180562543-180562696]
Back to top
Tissue distribution of vista4080
Back to top
Transcription factor that possibly regulate vista4080[chr1:180562543-180562696]
Back to top
Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 180562580 180562870 NR3C1 UCSC Txn Factor no Conserved 107847936
chr1 180562562 180562570 MEIS2 JASPAR yes 33529379
chr1 180562562 180562570 MEIS3 JASPAR yes 33529380
chr1 180562562 180562570 MEIS2 JASPAR yes 118407132
chr1 180562562 180562570 MEIS3 JASPAR yes 118407133
chr1 180562563 180562567 NFE TRANSFAC yes 33529381
chr1 180562563 180562567 NFE TRANSFAC yes 118407134
chr1 180562563 180562570 MEIS1 JASPAR yes 33529382
chr1 180562563 180562570 MEIS1 JASPAR yes 118407135
chr1 180562573 180562579 SOX10 JASPAR yes 33529383
chr1 180562573 180562579 SOX10 JASPAR yes 118407136
chr1 180562585 180562603 ESR1 JASPAR yes 33529384
chr1 180562585 180562603 ESR1 JASPAR yes 118407137
chr1 180562598 180562614 SOX8 JASPAR yes 33529385
chr1 180562598 180562614 SOX8 JASPAR yes 118407138
chr1 180562644 180562665 ZNF263 JASPAR yes 33529386
chr1 180562644 180562665 ZNF263 JASPAR yes 118407139
chr1 180562645 180562649 LFA1 TRANSFAC yes 33529387
chr1 180562645 180562649 LFA1 TRANSFAC yes 118407140
chr1 180562649 180562670 ZNF263 JASPAR yes 33529388
chr1 180562649 180562670 ZNF263 JASPAR yes 118407141
chr1 180562652 180562673 ZNF263 JASPAR yes 33529389
chr1 180562652 180562673 ZNF263 JASPAR yes 118407142
chr1 180562657 180562675 RARA JASPAR yes 33529390
chr1 180562657 180562675 RARA JASPAR yes 118407143
chr1 180562658 180562669 E2F6 JASPAR yes 33529391
chr1 180562658 180562669 E2F6 JASPAR yes 118407144
chr1 180562659 180562664 SP1 TRANSFAC yes 33529392
chr1 180562659 180562664 SP1 TRANSFAC yes 118407145
chr1 180562662 180562667 ETS2 TRANSFAC yes 33529393
chr1 180562662 180562667 ETS2 TRANSFAC yes 118407146
chr1 180562665 180562680 AR JASPAR yes 33529394
chr1 180562665 180562680 AR JASPAR yes 118407147
chr1 180562665 180562682 NR3C1 JASPAR yes 33529395
chr1 180562665 180562682 NR3C2 JASPAR yes 33529396
chr1 180562665 180562682 NR3C1 JASPAR yes 118407148
chr1 180562665 180562682 NR3C2 JASPAR yes 118407149
chr1 180562677 180562692 IRF9 JASPAR yes 33529397
chr1 180562677 180562692 IRF9 JASPAR yes 118407150
chr1 180562679 180562693 STAT1 JASPAR yes 33529398
chr1 180562679 180562693 STAT1 JASPAR yes 118407151
chr1 180562679 180562694 AR JASPAR yes 33529399
chr1 180562679 180562694 STAT2 JASPAR yes 33529400
chr1 180562679 180562694 AR JASPAR yes 118407152
chr1 180562679 180562694 STAT2 JASPAR yes 118407153
chr1 180562689 180562695 GATA3 JASPAR yes 33529401
chr1 180562689 180562695 GATA3 JASPAR yes 118407154
SNP sites on vista4080[chr1:180562543-180562696]
Back to top
chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 180562594 rs188493596 G C
ESR1 NR3C1
765145
chr1 180562603 rs139025868 G A
ESR1 NR3C1 SOX8
765146
chr1 180562689 rs577769218 A G
AR GATA3 IRF9 NR3C1 STAT1 STAT2
765147
Genes possibly regulated by vista4080[chr1:180562543-180562696]
Back to top
Details of Genes
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 180244515 180472089 - ACBD6 ENSG00000135847.5 180472089 0.57 1.0 1619 9546
chr1 180601140 180859387 + XPR1 ENSG00000143324.9 180601140 0.76 0.99 1620 61556
Expression level of Genes
Back to top
miRNAs possibly regulated by vista4080[chr1:180562543-180562696]
Back to top
Details of miRNAs
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
Back to top
No results