EnhancerDB
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  3. vista4083[chr1:180613229-180613603]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista4083[chr1:180613229-180613603]
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Tissue distribution of vista4083
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Transcription factor that possibly regulate vista4083[chr1:180613229-180613603]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 180613244 180613250 HiNF-A TRANSFAC yes 118407236
chr1 180613262 180613272 TEAD4 JASPAR yes 118407237
chr1 180613262 180613274 TEAD1 JASPAR yes 118407238
chr1 180613288 180613296 MEIS3 JASPAR yes 118407239
chr1 180613288 180613308 TBX19 JASPAR yes 33533657
chr1 180613288 180613308 TBX19 JASPAR yes 118407240
chr1 180613289 180613293 NFE TRANSFAC yes 118407241
chr1 180613290 180613306 T JASPAR yes 33533658
chr1 180613290 180613306 T JASPAR yes 118407242
chr1 180613312 180613326 POU4F1 JASPAR yes 33533659
chr1 180613312 180613326 POU4F1 JASPAR yes 118407243
chr1 180613315 180613325 MEOX1 JASPAR yes 33533660
chr1 180613315 180613325 MEOX2 JASPAR yes 33533661
chr1 180613315 180613325 MEOX1 JASPAR yes 118407244
chr1 180613315 180613325 MEOX2 JASPAR yes 118407245
chr1 180613316 180613333 BCL6B JASPAR yes 33533662
chr1 180613316 180613333 BCL6B JASPAR yes 118407246
chr1 180613319 180613330 STAT1 JASPAR yes 33533663
chr1 180613319 180613330 STAT1 JASPAR yes 118407247
chr1 180613346 180613361 MEF2A JASPAR yes 33533664
chr1 180613346 180613361 MEF2C JASPAR yes 33533665
chr1 180613346 180613361 MEF2A JASPAR yes 118407248
chr1 180613346 180613361 MEF2C JASPAR yes 118407249
chr1 180613347 180613362 MEF2A JASPAR yes 33533666
chr1 180613347 180613362 MEF2A JASPAR yes 118407250
chr1 180613348 180613360 MEF2A JASPAR yes 33533667
chr1 180613348 180613360 MEF2B JASPAR yes 33533668
chr1 180613348 180613360 MEF2D JASPAR yes 33533669
chr1 180613348 180613360 MEF2A JASPAR yes 118407251
chr1 180613348 180613360 MEF2B JASPAR yes 118407252
chr1 180613348 180613360 MEF2D JASPAR yes 118407253
chr1 180613349 180613359 MEF2A JASPAR yes 33533670
chr1 180613349 180613359 MEF2A JASPAR yes 118407254
chr1 180613350 180613354 TEAD2 TRANSFAC yes 33533671
chr1 180613350 180613354 TEAD2 TRANSFAC yes 118407255
chr1 180613350 180613360 ALX3 JASPAR yes 33533672
chr1 180613350 180613360 MEOX2 JASPAR yes 33533673
chr1 180613350 180613360 MNX1 JASPAR yes 33533674
chr1 180613350 180613360 ALX3 JASPAR yes 118407256
chr1 180613350 180613360 MEOX2 JASPAR yes 118407257
chr1 180613350 180613360 MNX1 JASPAR yes 118407258
chr1 180613351 180613359 LBX1 JASPAR yes 33533675
chr1 180613351 180613359 PDX1 JASPAR yes 33533676
chr1 180613351 180613359 VAX1 JASPAR yes 33533677
chr1 180613351 180613359 VAX2 JASPAR yes 33533678
chr1 180613351 180613359 VSX1 JASPAR yes 33533679
chr1 180613351 180613359 VSX2 JASPAR yes 33533680
chr1 180613351 180613359 LBX1 JASPAR yes 118407259
chr1 180613351 180613359 PDX1 JASPAR yes 118407260
chr1 180613351 180613359 VAX1 JASPAR yes 118407261
chr1 180613351 180613359 VAX2 JASPAR yes 118407262
chr1 180613351 180613359 VSX1 JASPAR yes 118407263
chr1 180613351 180613359 VSX2 JASPAR yes 118407264
chr1 180613353 180613374 IRF1 JASPAR yes 33533681
chr1 180613353 180613374 IRF1 JASPAR yes 118407265
chr1 180613357 180613372 PRDM1 JASPAR yes 33533682
chr1 180613357 180613372 STAT2 JASPAR yes 33533683
chr1 180613357 180613372 PRDM1 JASPAR yes 118407266
chr1 180613357 180613372 STAT2 JASPAR yes 118407267
chr1 180613365 180613381 POU4F3 JASPAR yes 33533684
chr1 180613365 180613381 POU4F3 JASPAR yes 118407268
chr1 180613367 180613381 POU4F1 JASPAR yes 33533685
chr1 180613367 180613381 POU4F1 JASPAR yes 118407269
chr1 180613373 180613384 DUX4 JASPAR yes 33533686
chr1 180613373 180613384 DUX4 JASPAR yes 118407270
chr1 180613378 180613382 YY1 TRANSFAC yes 33533687
chr1 180613378 180613382 YY1 TRANSFAC yes 118407271
chr1 180613382 180613386 YY1 TRANSFAC yes 33533688
chr1 180613382 180613386 YY1 TRANSFAC yes 118407272
chr1 180613415 180613429 RORA JASPAR yes 33533689
chr1 180613415 180613429 RORA JASPAR yes 118407273
chr1 180613418 180613428 RORA JASPAR yes 33533690
chr1 180613418 180613428 RORA JASPAR yes 118407274
chr1 180613421 180613427 ESR1 TRANSFAC yes 33533691
chr1 180613421 180613427 ESR1 TRANSFAC yes 118407275
chr1 180613423 180613427 ESR1 TRANSFAC yes 33533692
chr1 180613423 180613427 ESR1 TRANSFAC yes 118407276
chr1 180613424 180613445 REST JASPAR yes 33533693
chr1 180613424 180613445 REST JASPAR yes 118407277
chr1 180613428 180613432 H4TF2 TRANSFAC yes 33533694
chr1 180613428 180613432 H4TF2 TRANSFAC yes 118407278
chr1 180613447 180613460 ELF3 JASPAR yes 33533695
chr1 180613447 180613460 ELF3 JASPAR yes 118407279
chr1 180613448 180613461 ELF1 JASPAR yes 33533696
chr1 180613448 180613461 ELF1 JASPAR yes 118407280
chr1 180613455 180613463 RHOXF1 JASPAR yes 33533697
chr1 180613455 180613463 RHOXF1 JASPAR yes 118407281
chr1 180613458 180613470 POU2F1 JASPAR yes 33533698
chr1 180613458 180613470 POU2F1 JASPAR yes 118407282
chr1 180613458 180613471 POU3F3 JASPAR yes 33533699
chr1 180613458 180613471 POU3F3 JASPAR yes 118407283
chr1 180613458 180613472 POU1F1 JASPAR yes 33533700
chr1 180613458 180613472 POU1F1 JASPAR yes 118407284
chr1 180613459 180613471 POU3F1 JASPAR yes 33533701
chr1 180613459 180613471 POU3F2 JASPAR yes 33533702
chr1 180613459 180613471 POU3F1 JASPAR yes 118407285
chr1 180613459 180613471 POU3F2 JASPAR yes 118407286
chr1 180613460 180613469 POU3F4 JASPAR yes 33533703
chr1 180613460 180613469 POU5F1B JASPAR yes 33533704
chr1 180613460 180613469 POU3F4 JASPAR yes 118407287
chr1 180613460 180613469 POU5F1B JASPAR yes 118407288
chr1 180613485 180613503 IRF2 JASPAR yes 33533705
chr1 180613485 180613503 IRF2 JASPAR yes 118407289
chr1 180613486 180613493 JUN TRANSFAC yes 33533706
chr1 180613486 180613493 SP1 TRANSFAC yes 33533707
chr1 180613486 180613493 JUN TRANSFAC yes 118407290
chr1 180613486 180613493 SP1 TRANSFAC yes 118407291
chr1 180613486 180613507 IRF1 JASPAR yes 33533708
chr1 180613486 180613507 IRF1 JASPAR yes 118407292
chr1 180613488 180613503 PRDM1 JASPAR yes 33533709
chr1 180613488 180613503 STAT2 JASPAR yes 33533710
chr1 180613488 180613503 PRDM1 JASPAR yes 118407293
chr1 180613488 180613503 STAT2 JASPAR yes 118407294
chr1 180613489 180613503 STAT1 JASPAR yes 33533711
chr1 180613489 180613503 STAT1 JASPAR yes 118407295
chr1 180613490 180613504 IRF7 JASPAR yes 33533712
chr1 180613490 180613504 IRF7 JASPAR yes 118407296
chr1 180613493 180613498 ETS2 TRANSFAC yes 33533713
chr1 180613493 180613498 ETS2 TRANSFAC yes 118407297
chr1 180613514 180613525 FOXA1 JASPAR yes 33533714
chr1 180613514 180613525 FOXA1 JASPAR yes 118407298
chr1 180613520 180613531 E2F6 JASPAR yes 33533715
chr1 180613520 180613531 E2F6 JASPAR yes 118407299
chr1 180613528 180613549 IRF1 JASPAR yes 33533716
chr1 180613528 180613549 IRF1 JASPAR yes 118407300
chr1 180613534 180613555 IRF1 JASPAR yes 33533717
chr1 180613534 180613555 IRF1 JASPAR yes 118407301
chr1 180613536 180613551 PRDM1 JASPAR yes 33533718
chr1 180613536 180613551 STAT2 JASPAR yes 33533719
chr1 180613536 180613551 PRDM1 JASPAR yes 118407302
chr1 180613536 180613551 STAT2 JASPAR yes 118407303
chr1 180613539 180613554 FOXP1 JASPAR yes 33533720
chr1 180613539 180613554 FOXP1 JASPAR yes 118407304
chr1 180613540 180613555 FOXP1 JASPAR yes 33533721
chr1 180613540 180613555 FOXP1 JASPAR yes 118407305
chr1 180613541 180613556 FOXP1 JASPAR yes 33533722
chr1 180613541 180613556 FOXP1 JASPAR yes 118407306
chr1 180613542 180613557 FOXP1 JASPAR yes 33533723
chr1 180613542 180613557 FOXP1 JASPAR yes 118407307
chr1 180613543 180613558 FOXP1 JASPAR yes 33533724
chr1 180613543 180613558 FOXP1 JASPAR yes 118407308
chr1 180613554 180613568 GATA2 JASPAR yes 33533725
chr1 180613554 180613568 GATA2 JASPAR yes 118407309
chr1 180613556 180613564 GATA5 JASPAR yes 33533726
chr1 180613556 180613564 GATA5 JASPAR yes 118407310
chr1 180613559 180613562 MYB TRANSFAC yes 33533727
chr1 180613559 180613562 MYB TRANSFAC yes 118407311
chr1 180613585 180613606 IRF1 JASPAR yes 33533728
chr1 180613585 180613606 IRF1 JASPAR yes 118407312
chr1 180613587 180613602 PRDM1 JASPAR yes 33533729
chr1 180613587 180613602 PRDM1 JASPAR yes 118407313
chr1 180613591 180613606 MEF2C JASPAR yes 33533730
chr1 180613591 180613606 MEF2C JASPAR yes 118407314
chr1 180613600 180613603 MYB TRANSFAC yes 33533731
chr1 180613600 180613603 MYB TRANSFAC yes 118407315
SNP sites on vista4083[chr1:180613229-180613603]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 180613274 rs112707690 C T
TEAD1
765569
chr1 180613535 rs532654385 A T
IRF1
765570
chr1 180613583 rs562743973 G A no 765571
chr1 180613589 rs115392086 G A
IRF1 PRDM1
765572
Genes possibly regulated by vista4083[chr1:180613229-180613603]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 180601140 180859387 + XPR1 ENSG00000143324.9 180601140 0.76 0.99 1620 87911
Expression level of Genes
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miRNAs possibly regulated by vista4083[chr1:180613229-180613603]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results