EnhancerDB
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  3. vista40856[chr3:48128782-48129302]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista40856[chr3:48128782-48129302]
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Tissue distribution of vista40856
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Transcription factor that possibly regulate vista40856[chr3:48128782-48129302]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr3 48128956 48129280 CEBPB UCSC Txn Factor no Conserved 108529128
chr3 48128993 48129720 E2F1 UCSC Txn Factor no Conserved 108529129
chr3 48129126 48129563 RELA UCSC Txn Factor no Conserved 108529130
chr3 48128773 48128784 NFKB1 JASPAR yes 2241276
chr3 48128773 48128784 NFKB1 JASPAR yes 70978949
chr3 48128782 48128797 RFX5 JASPAR yes 2241277
chr3 48128782 48128797 RFX5 JASPAR yes 70978950
chr3 48128788 48128803 SOX21 JASPAR yes 2241278
chr3 48128788 48128803 SOX21 JASPAR yes 70978951
chr3 48128806 48128818 FOXI1 JASPAR yes 2241279
chr3 48128806 48128818 FOXI1 JASPAR yes 70978952
chr3 48128822 48128839 PAX1 JASPAR yes 2241280
chr3 48128822 48128839 PAX1 JASPAR yes 70978953
chr3 48128835 48128845 MYF6 JASPAR yes 2241281
chr3 48128835 48128845 MYF6 JASPAR yes 70978954
chr3 48128855 48128865 MAX JASPAR yes 2241282
chr3 48128855 48128865 MAX JASPAR yes 70978955
chr3 48128875 48128887 PBX1 JASPAR yes 2241283
chr3 48128875 48128887 PBX1 JASPAR yes 70978956
chr3 48128876 48128890 ONECUT1 JASPAR yes 2241284
chr3 48128876 48128890 ONECUT2 JASPAR yes 2241285
chr3 48128876 48128890 ONECUT3 JASPAR yes 2241286
chr3 48128876 48128890 ONECUT1 JASPAR yes 70978957
chr3 48128876 48128890 ONECUT2 JASPAR yes 70978958
chr3 48128876 48128890 ONECUT3 JASPAR yes 70978959
chr3 48128884 48128899 MEF2C JASPAR yes 2241287
chr3 48128884 48128899 MEF2C JASPAR yes 70978960
chr3 48128885 48128900 MEF2A JASPAR yes 2241288
chr3 48128885 48128900 MEF2A JASPAR yes 70978961
chr3 48128886 48128890 TEAD2 TRANSFAC yes 2241289
chr3 48128886 48128890 TEAD2 TRANSFAC yes 70978962
chr3 48128886 48128891 TBP TRANSFAC yes 2241290
chr3 48128886 48128891 TBP TRANSFAC yes 70978963
chr3 48128886 48128892 TFIID TRANSFAC yes 2241291
chr3 48128886 48128892 TFIID TRANSFAC yes 70978964
chr3 48128886 48128898 MEF2A JASPAR yes 2241292
chr3 48128886 48128898 MEF2B JASPAR yes 2241293
chr3 48128886 48128898 MEF2D JASPAR yes 2241294
chr3 48128886 48128898 MEF2A JASPAR yes 70978965
chr3 48128886 48128898 MEF2B JASPAR yes 70978966
chr3 48128886 48128898 MEF2D JASPAR yes 70978967
chr3 48128887 48128897 MEF2A JASPAR yes 2241295
chr3 48128887 48128897 MEF2A JASPAR yes 70978968
chr3 48128906 48128921 HNF4A JASPAR yes 2241296
chr3 48128906 48128921 HNF4A JASPAR yes 70978969
chr3 48128931 48128942 NFE2L2 JASPAR yes 2241297
chr3 48128931 48128942 NFE2L2 JASPAR yes 70978970
chr3 48128937 48128941 LFA1 TRANSFAC yes 2241298
chr3 48128937 48128941 LFA1 TRANSFAC yes 70978971
chr3 48128961 48128973 NHLH1 JASPAR yes 2241299
chr3 48128961 48128973 NHLH1 JASPAR yes 70978972
chr3 48128962 48128972 MSC JASPAR yes 2241300
chr3 48128962 48128972 MSC JASPAR yes 70978973
chr3 48128987 48128991 YY1 TRANSFAC yes 2241301
chr3 48128987 48128991 YY1 TRANSFAC yes 70978974
chr3 48128994 48128998 NFE TRANSFAC yes 2241302
chr3 48128994 48128998 NFE TRANSFAC yes 70978975
chr3 48129009 48129023 BATF3 JASPAR yes 2241303
chr3 48129009 48129023 BATF3 JASPAR yes 70978976
chr3 48129009 48129029 ESR1 JASPAR yes 2241304
chr3 48129009 48129029 ESR1 JASPAR yes 70978977
chr3 48129012 48129029 RXRA JASPAR yes 2241305
chr3 48129012 48129029 RXRA JASPAR yes 70978978
chr3 48129019 48129029 SP1 JASPAR yes 2241306
chr3 48129019 48129029 SP1 JASPAR yes 70978979
chr3 48129020 48129030 SP1 JASPAR yes 2241307
chr3 48129020 48129030 SP1 JASPAR yes 70978980
chr3 48129022 48129028 NFE2 TRANSFAC yes 2241308
chr3 48129022 48129028 NFE2 TRANSFAC yes 70978981
chr3 48129025 48129034 SP1 TRANSFAC yes 2241309
chr3 48129025 48129034 SP1 TRANSFAC yes 70978982
chr3 48129026 48129032 SP1 TRANSFAC yes 2241310
chr3 48129026 48129032 SP1 TRANSFAC yes 70978983
chr3 48129026 48129036 SP1 JASPAR yes 2241311
chr3 48129026 48129036 SP1 JASPAR yes 70978984
chr3 48129027 48129034 SP1 TRANSFAC yes 2241312
chr3 48129027 48129034 SP1 TRANSFAC yes 70978985
chr3 48129028 48129033 SP1 TRANSFAC yes 2241313
chr3 48129028 48129033 SP1 TRANSFAC yes 70978986
chr3 48129028 48129034 SP1 TRANSFAC yes 2241314
chr3 48129028 48129034 SP1 TRANSFAC yes 70978987
chr3 48129028 48129035 SP1 TRANSFAC yes 2241315
chr3 48129028 48129035 SP1 TRANSFAC yes 70978988
chr3 48129044 48129062 RARA JASPAR yes 70978989
chr3 48129046 48129067 ZNF263 JASPAR yes 70978990
chr3 48129054 48129064 MZF1 JASPAR yes 70978991
chr3 48129065 48129086 MAFG JASPAR yes 70978992
chr3 48129097 48129102 GATA2 JASPAR yes 70978993
chr3 48129101 48129114 ATF4 JASPAR yes 70978994
chr3 48129143 48129148 MYC TRANSFAC yes 70978995
chr3 48129145 48129154 NFIX JASPAR yes 70978996
chr3 48129145 48129155 NFIA JASPAR yes 70978997
chr3 48129147 48129153 NFIC JASPAR yes 70978998
chr3 48129170 48129184 E2F7 JASPAR yes 70978999
chr3 48129171 48129183 E2F8 JASPAR yes 70979000
chr3 48129172 48129183 E2F1 JASPAR yes 70979001
chr3 48129173 48129178 SP1 TRANSFAC yes 70979002
chr3 48129173 48129184 E2F4 JASPAR yes 70979003
chr3 48129173 48129184 E2F6 JASPAR yes 70979004
chr3 48129174 48129179 SP1 TRANSFAC yes 70979005
chr3 48129182 48129193 NRF1 JASPAR yes 70979006
chr3 48129183 48129194 NRF1 JASPAR yes 70979007
chr3 48129184 48129195 NRF1 JASPAR yes 70979008
chr3 48129185 48129196 NRF1 JASPAR yes 70979009
chr3 48129186 48129197 NRF1 JASPAR yes 70979010
chr3 48129210 48129221 NRF1 JASPAR yes 70979011
chr3 48129226 48129237 NRF1 JASPAR yes 70979012
chr3 48129231 48129251 RREB1 JASPAR yes 70979013
chr3 48129233 48129253 RREB1 JASPAR yes 70979014
chr3 48129235 48129255 RREB1 JASPAR yes 70979015
chr3 48129237 48129257 RREB1 JASPAR yes 70979016
chr3 48129239 48129259 RREB1 JASPAR yes 70979017
chr3 48129241 48129261 RREB1 JASPAR yes 70979018
chr3 48129243 48129263 RREB1 JASPAR yes 70979019
chr3 48129245 48129265 RREB1 JASPAR yes 70979020
chr3 48129247 48129267 RREB1 JASPAR yes 70979021
chr3 48129249 48129269 RREB1 JASPAR yes 70979022
chr3 48129251 48129271 RREB1 JASPAR yes 70979023
chr3 48129253 48129273 RREB1 JASPAR yes 70979024
SNP sites on vista40856[chr3:48128782-48129302]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr3 48129108 rs550673059 T G
ATF4 CEBPB E2F1
6721858
chr3 48129126 rs114337433 C T
CEBPB E2F1 RELA
6721859
chr3 48129221 rs529585699 A G
CEBPB E2F1 NRF1 RELA
6721860
chr3 48129235 rs4295189 G A
CEBPB E2F1 NRF1 RELA RREB1
6721861
Genes possibly regulated by vista40856[chr3:48128782-48129302]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr3 47892182 48130769 - MAP4 ENSG00000047849.17 48130769 0.67 1.0 3629 98533
Expression level of Genes
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miRNAs possibly regulated by vista40856[chr3:48128782-48129302]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results