EnhancerDB
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  3. vista4087[chr1:181031700-181031837]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista4087[chr1:181031700-181031837]
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Tissue distribution of vista4087
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Transcription factor that possibly regulate vista4087[chr1:181031700-181031837]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 181031100 181032448 POLR2A UCSC Txn Factor no Conserved 107848086
chr1 181031100 181032448 POLR2A UCSC Txn Factor no Conserved 107848087
chr1 181031206 181031912 RUNX3 UCSC Txn Factor no Conserved 107848088
chr1 181031615 181031888 SPI1 UCSC Txn Factor no Conserved 107848108
chr1 181031682 181031703 ZNF263 JASPAR yes 33549279
chr1 181031682 181031703 ZNF263 JASPAR yes 118407433
chr1 181031685 181031706 ZNF263 JASPAR yes 33549280
chr1 181031685 181031706 ZNF263 JASPAR yes 118407434
chr1 181031702 181031712 MSC JASPAR yes 33549282
chr1 181031702 181031712 MSC JASPAR yes 118407435
chr1 181031735 181031740 ETS2 TRANSFAC yes 33549283
chr1 181031735 181031740 ETS2 TRANSFAC yes 118407436
chr1 181031746 181031760 SPI1 JASPAR yes 33549284
chr1 181031746 181031760 SPIC JASPAR yes 33549285
chr1 181031746 181031760 SPI1 JASPAR yes 118407437
chr1 181031746 181031760 SPIC JASPAR yes 118407438
chr1 181031747 181031760 ELF1 JASPAR yes 33549286
chr1 181031747 181031760 ELF1 JASPAR yes 118407439
chr1 181031748 181031760 EHF JASPAR yes 33549287
chr1 181031748 181031760 EHF JASPAR yes 118407440
chr1 181031748 181031761 ELF3 JASPAR yes 33549288
chr1 181031748 181031761 ELF3 JASPAR yes 118407441
chr1 181031748 181031769 IRF1 JASPAR yes 33549289
chr1 181031748 181031769 IRF1 JASPAR yes 118407442
chr1 181031749 181031760 ELF5 JASPAR yes 33549290
chr1 181031749 181031760 ELF5 JASPAR yes 118407443
chr1 181031750 181031765 IRF9 JASPAR yes 33549291
chr1 181031750 181031765 IRF9 JASPAR yes 118407444
chr1 181031751 181031756 ETS2 TRANSFAC yes 33549292
chr1 181031751 181031756 ETS2 TRANSFAC yes 118407445
chr1 181031751 181031759 FEV JASPAR yes 33549293
chr1 181031751 181031759 FEV JASPAR yes 118407446
chr1 181031752 181031759 SPI1 JASPAR yes 33549294
chr1 181031752 181031759 SPI1 JASPAR yes 118407447
chr1 181031752 181031766 STAT1 JASPAR yes 33549295
chr1 181031752 181031766 STAT1 JASPAR yes 118407448
chr1 181031752 181031767 PRDM1 JASPAR yes 33549296
chr1 181031752 181031767 STAT2 JASPAR yes 33549297
chr1 181031752 181031767 PRDM1 JASPAR yes 118407449
chr1 181031752 181031767 STAT2 JASPAR yes 118407450
chr1 181031753 181031765 IRF1 JASPAR yes 33549298
chr1 181031753 181031765 IRF1 JASPAR yes 118407451
chr1 181031790 181031810 ESR1 JASPAR yes 33549299
chr1 181031790 181031810 ESR1 JASPAR yes 118407452
chr1 181031804 181031819 HNF4G JASPAR yes 33549300
chr1 181031804 181031819 HNF4G JASPAR yes 118407453
chr1 181031813 181031818 ETS2 TRANSFAC yes 33549301
chr1 181031813 181031818 ETS2 TRANSFAC yes 118407454
chr1 181031835 181031849 NR2F1 JASPAR yes 33549302
chr1 181031835 181031849 NR2F1 JASPAR yes 118407455
SNP sites on vista4087[chr1:181031700-181031837]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 181031709 rs3936940 T C
MSC POLR2A RUNX3 SPI1
767121
chr1 181031783 rs3936939 G A
POLR2A RUNX3 SPI1
767122
chr1 181031797 rs3936938 G A
ESR1 POLR2A RUNX3 SPI1
767123
chr1 181031800 rs151284830 C T
ESR1 POLR2A RUNX3 SPI1
767124
chr1 181031801 rs113865916 G A
ESR1 POLR2A RUNX3 SPI1
767125
chr1 181031806 rs111904037 G A
ESR1 HNF4G POLR2A RUNX3 SPI1
767126
Genes possibly regulated by vista4087[chr1:181031700-181031837]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 180941695 180949868 + AL162431.1 ENSG00000234237.2 180941695 0.93 1.0 1622 9995
chr1 180941861 180992047 - STX6 ENSG00000135823.9 180992047 0.72 0.99 1623 60347
chr1 181003067 181031074 + MR1 ENSG00000153029.10 181003067 0.72 0.99 1624 71367
chr1 181057638 181059977 + IER5 ENSG00000162783.8 181057638 0.82 1.0 1625 74199
Expression level of Genes
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miRNAs possibly regulated by vista4087[chr1:181031700-181031837]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results