EnhancerDB
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  3. vista40871[chr3:49218772-49219051]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista40871[chr3:49218772-49219051]
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Tissue distribution of vista40871
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Transcription factor that possibly regulate vista40871[chr3:49218772-49219051]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr3 49218770 49218785 FOXP1 JASPAR yes 2276625
chr3 49218770 49218785 FOXP1 JASPAR yes 70979654
chr3 49218771 49218786 FOXP1 JASPAR yes 2276626
chr3 49218771 49218786 FOXP1 JASPAR yes 70979655
chr3 49218772 49218787 FOXP1 JASPAR yes 2276627
chr3 49218772 49218787 FOXP1 JASPAR yes 70979656
chr3 49218772 49218793 IRF1 JASPAR yes 2276628
chr3 49218772 49218793 IRF1 JASPAR yes 70979657
chr3 49218773 49218788 FOXP1 JASPAR yes 2276629
chr3 49218773 49218788 FOXP1 JASPAR yes 70979658
chr3 49218773 49218794 IRF1 JASPAR yes 2276630
chr3 49218773 49218794 IRF1 JASPAR yes 70979659
chr3 49218774 49218789 FOXP1 JASPAR yes 2276631
chr3 49218774 49218789 FOXP1 JASPAR yes 70979660
chr3 49218774 49218795 IRF1 JASPAR yes 2276632
chr3 49218774 49218795 IRF1 JASPAR yes 70979661
chr3 49218775 49218790 FOXP1 JASPAR yes 2276633
chr3 49218775 49218790 FOXP1 JASPAR yes 70979662
chr3 49218775 49218796 IRF1 JASPAR yes 2276634
chr3 49218775 49218796 IRF1 JASPAR yes 70979663
chr3 49218776 49218791 FOXP1 JASPAR yes 2276635
chr3 49218776 49218791 FOXP1 JASPAR yes 70979664
chr3 49218776 49218797 IRF1 JASPAR yes 2276636
chr3 49218776 49218797 IRF1 JASPAR yes 70979665
chr3 49218777 49218792 FOXP1 JASPAR yes 2276637
chr3 49218777 49218792 FOXP1 JASPAR yes 70979666
chr3 49218777 49218798 IRF1 JASPAR yes 2276638
chr3 49218777 49218798 IRF1 JASPAR yes 70979667
chr3 49218778 49218793 FOXP1 JASPAR yes 2276639
chr3 49218778 49218793 FOXP1 JASPAR yes 70979668
chr3 49218778 49218799 IRF1 JASPAR yes 2276640
chr3 49218778 49218799 IRF1 JASPAR yes 70979669
chr3 49218779 49218794 FOXP1 JASPAR yes 2276641
chr3 49218779 49218794 FOXP1 JASPAR yes 70979670
chr3 49218779 49218800 IRF1 JASPAR yes 2276642
chr3 49218779 49218800 IRF1 JASPAR yes 70979671
chr3 49218780 49218795 FOXP1 JASPAR yes 2276643
chr3 49218780 49218795 FOXP1 JASPAR yes 70979672
chr3 49218783 49218798 STAT2 JASPAR yes 2276644
chr3 49218783 49218798 STAT2 JASPAR yes 70979673
chr3 49218783 49218804 IRF1 JASPAR yes 2276645
chr3 49218783 49218804 IRF1 JASPAR yes 70979674
chr3 49218851 49218857 PEA3 TRANSFAC yes 2276646
chr3 49218851 49218857 PEA3 TRANSFAC yes 70979675
chr3 49218892 49218896 LFA1 TRANSFAC yes 2276647
chr3 49218892 49218896 LFA1 TRANSFAC yes 70979676
chr3 49218892 49218906 MTF1 JASPAR yes 2276648
chr3 49218892 49218906 MTF1 JASPAR yes 70979677
chr3 49218918 49218922 NFE TRANSFAC yes 2276649
chr3 49218918 49218922 NFE TRANSFAC yes 70979678
chr3 49218926 49218938 MEF2D JASPAR yes 2276650
chr3 49218926 49218938 MEF2D JASPAR yes 70979679
chr3 49218929 49218945 POU4F2 JASPAR yes 2276651
chr3 49218929 49218945 POU4F2 JASPAR yes 70979680
chr3 49218934 49218937 MYB TRANSFAC yes 2276652
chr3 49218934 49218937 MYB TRANSFAC yes 70979681
chr3 49218936 49218946 NOTO JASPAR yes 2276653
chr3 49218936 49218946 NOTO JASPAR yes 70979682
chr3 49218937 49218956 PAX5 JASPAR yes 2276654
chr3 49218937 49218956 PAX5 JASPAR yes 70979683
chr3 49218964 49218976 ZBTB7A JASPAR yes 2276655
chr3 49218964 49218976 ZBTB7A JASPAR yes 70979684
chr3 49218969 49218973 H4TF2 TRANSFAC yes 2276656
chr3 49218969 49218973 H4TF2 TRANSFAC yes 70979685
chr3 49218969 49218984 RFX5 JASPAR yes 2276657
chr3 49218969 49218984 RFX5 JASPAR yes 70979686
chr3 49218972 49218993 REST JASPAR yes 2276658
chr3 49218972 49218993 REST JASPAR yes 70979687
chr3 49218983 49218997 SPI1 JASPAR yes 2276659
chr3 49218983 49218997 SPI1 JASPAR yes 70979688
chr3 49218989 49218998 NKX2-8 JASPAR yes 2276660
chr3 49218989 49218998 NKX2-8 JASPAR yes 70979689
chr3 49218989 49218999 NKX2-3 JASPAR yes 2276661
chr3 49218989 49218999 NKX2-3 JASPAR yes 70979690
chr3 49219001 49219012 USF1 JASPAR yes 2276662
chr3 49219001 49219012 USF2 JASPAR yes 2276663
chr3 49219001 49219012 USF1 JASPAR yes 70979691
chr3 49219001 49219012 USF2 JASPAR yes 70979692
chr3 49219002 49219012 TFEC JASPAR yes 2276664
chr3 49219002 49219012 TFEC JASPAR yes 70979693
chr3 49219009 49219027 RARA JASPAR yes 2276665
chr3 49219009 49219027 RARA JASPAR yes 70979694
chr3 49219014 49219024 RORA JASPAR yes 2276666
chr3 49219014 49219024 RORA JASPAR yes 70979695
chr3 49219015 49219028 NR2F1 JASPAR yes 2276667
chr3 49219015 49219028 NR2F1 JASPAR yes 70979696
chr3 49219017 49219031 RXRB JASPAR yes 2276668
chr3 49219017 49219031 RXRG JASPAR yes 2276669
chr3 49219017 49219031 RXRB JASPAR yes 70979697
chr3 49219017 49219031 RXRG JASPAR yes 70979698
chr3 49219017 49219035 RARA JASPAR yes 2276670
chr3 49219017 49219035 RARA JASPAR yes 70979699
chr3 49219019 49219023 ESR1 TRANSFAC yes 2276671
chr3 49219019 49219023 ESR1 TRANSFAC yes 70979700
chr3 49219025 49219044 PAX5 JASPAR yes 2276672
chr3 49219025 49219044 PAX5 JASPAR yes 70979701
chr3 49219031 49219042 NFE2 JASPAR yes 2276673
chr3 49219031 49219042 NFE2 JASPAR yes 70979702
SNP sites on vista40871[chr3:49218772-49219051]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr3 49218776 rs142397853 GAA G
FOXP1 IRF1
6724655
chr3 49218776 rs58995553 GAA G
FOXP1 IRF1
6724656
chr3 49218776 rs747335559 GAA G
FOXP1 IRF1
6724657
chr3 49218888 rs4955421 G A no 6724658
Genes possibly regulated by vista40871[chr3:49218772-49219051]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr3 49067140 49131796 - QRICH1 ENSG00000198218.6 49131796 0.56 1.0 3660 13024
chr3 49133365 49142553 - QARS ENSG00000172053.10 49142553 0.66 1.0 3661 23781
chr3 49145479 49158371 - USP19 ENSG00000172046.14 49158371 0.79 1.0 3662 39599
chr3 49158547 49170551 - LAMB2 ENSG00000172037.9 49170551 0.65 1.0 3663 51779
chr3 49199968 49203754 - CCDC71 ENSG00000177352.9 49203754 0.61 1.0 3664 84982
chr3 49209044 49213917 + KLHDC8B ENSG00000185909.10 49209044 0.84 0.99 3665 90272
chr3 49215065 49229291 - C3orf84 ENSG00000236980.5 49229291 0.0 0.0 3666 89760
chr3 49235861 49295537 + CCDC36 ENSG00000173421.12 49235861 0.86 0.92 3667 83190
chr3 49297518 49298744 + RP11-3B7.1 ENSG00000225399.3 49297518 0.89 0.0 3668 21533
chr3 49306035 49315342 - C3orf62 ENSG00000188315.3 49315342 0.67 0.99 3669 3709
Expression level of Genes
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miRNAs possibly regulated by vista40871[chr3:49218772-49219051]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results