EnhancerDB
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  3. vista40874[chr3:49286239-49286578]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista40874[chr3:49286239-49286578]
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Tissue distribution of vista40874
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Transcription factor that possibly regulate vista40874[chr3:49286239-49286578]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr3 49286228 49286239 STAT3 JASPAR yes 2279159
chr3 49286228 49286239 STAT3 JASPAR yes 70979805
chr3 49286253 49286257 NFE TRANSFAC yes 2279160
chr3 49286253 49286257 NFE TRANSFAC yes 70979806
chr3 49286254 49286259 GATA2 JASPAR yes 2279161
chr3 49286254 49286259 GATA2 JASPAR yes 70979807
chr3 49286272 49286289 BCL6B JASPAR yes 2279162
chr3 49286272 49286289 BCL6B JASPAR yes 70979808
chr3 49286279 49286287 FEV JASPAR yes 2279163
chr3 49286279 49286287 FEV JASPAR yes 70979809
chr3 49286298 49286311 DUXA JASPAR yes 2279164
chr3 49286298 49286311 DUXA JASPAR yes 70979810
chr3 49286299 49286310 DUX4 JASPAR yes 2279165
chr3 49286299 49286310 DUX4 JASPAR yes 70979811
chr3 49286301 49286315 POU4F1 JASPAR yes 2279166
chr3 49286301 49286315 POU4F1 JASPAR yes 70979812
chr3 49286301 49286316 HNF1A JASPAR yes 2279167
chr3 49286301 49286316 HNF1A JASPAR yes 70979813
chr3 49286302 49286314 HNF1B JASPAR yes 2279168
chr3 49286302 49286314 HNF1B JASPAR yes 70979814
chr3 49286302 49286315 HNF1B JASPAR yes 2279169
chr3 49286302 49286315 HNF1B JASPAR yes 70979815
chr3 49286315 49286322 SPIB JASPAR yes 2279170
chr3 49286315 49286322 SPIB JASPAR yes 70979816
chr3 49286336 49286348 BHLHE23 JASPAR yes 2279171
chr3 49286336 49286348 BHLHE23 JASPAR yes 70979817
chr3 49286337 49286347 BHLHE22 JASPAR yes 2279172
chr3 49286337 49286347 NEUROD2 JASPAR yes 2279173
chr3 49286337 49286347 NEUROG2 JASPAR yes 2279174
chr3 49286337 49286347 OLIG1 JASPAR yes 2279175
chr3 49286337 49286347 OLIG2 JASPAR yes 2279176
chr3 49286337 49286347 OLIG3 JASPAR yes 2279177
chr3 49286337 49286347 BHLHE22 JASPAR yes 70979818
chr3 49286337 49286347 NEUROD2 JASPAR yes 70979819
chr3 49286337 49286347 NEUROG2 JASPAR yes 70979820
chr3 49286337 49286347 OLIG1 JASPAR yes 70979821
chr3 49286337 49286347 OLIG2 JASPAR yes 70979822
chr3 49286337 49286347 OLIG3 JASPAR yes 70979823
chr3 49286349 49286353 H4TF2 TRANSFAC yes 2279178
chr3 49286349 49286353 H4TF2 TRANSFAC yes 70979824
chr3 49286364 49286377 HSF2 JASPAR yes 2279179
chr3 49286364 49286377 HSF2 JASPAR yes 70979825
chr3 49286373 49286378 MYB TRANSFAC yes 2279180
chr3 49286373 49286378 MYB TRANSFAC yes 70979826
chr3 49286398 49286419 IRF1 JASPAR yes 2279181
chr3 49286398 49286419 IRF1 JASPAR yes 70979827
chr3 49286416 49286426 TFEC JASPAR yes 2279182
chr3 49286416 49286426 TFEC JASPAR yes 70979828
chr3 49286432 49286446 SPI1 JASPAR yes 2279183
chr3 49286432 49286446 SPIC JASPAR yes 2279184
chr3 49286432 49286446 SPI1 JASPAR yes 70979829
chr3 49286432 49286446 SPIC JASPAR yes 70979830
chr3 49286438 49286443 ETS2 TRANSFAC yes 2279185
chr3 49286438 49286443 ETS2 TRANSFAC yes 70979831
chr3 49286465 49286469 NFE TRANSFAC yes 2279186
chr3 49286465 49286469 NFE TRANSFAC yes 70979832
chr3 49286474 49286485 NFIL3 JASPAR yes 2279187
chr3 49286474 49286485 NFIL3 JASPAR yes 70979833
chr3 49286475 49286486 CEBPA JASPAR yes 2279188
chr3 49286475 49286486 CEBPA JASPAR yes 70979834
chr3 49286475 49286487 DBP JASPAR yes 2279189
chr3 49286475 49286487 HLF JASPAR yes 2279190
chr3 49286475 49286487 TEF JASPAR yes 2279191
chr3 49286475 49286487 DBP JASPAR yes 70979835
chr3 49286475 49286487 HLF JASPAR yes 70979836
chr3 49286475 49286487 TEF JASPAR yes 70979837
chr3 49286477 49286488 NFIL3 JASPAR yes 2279192
chr3 49286477 49286488 NFIL3 JASPAR yes 70979838
chr3 49286480 49286490 ESX1 JASPAR yes 2279193
chr3 49286480 49286490 GBX1 JASPAR yes 2279194
chr3 49286480 49286490 GSX1 JASPAR yes 2279195
chr3 49286480 49286490 GSX2 JASPAR yes 2279196
chr3 49286480 49286490 ESX1 JASPAR yes 70979839
chr3 49286480 49286490 GBX1 JASPAR yes 70979840
chr3 49286480 49286490 GSX1 JASPAR yes 70979841
chr3 49286480 49286490 GSX2 JASPAR yes 70979842
chr3 49286481 49286489 BSX JASPAR yes 2279197
chr3 49286481 49286489 DLX6 JASPAR yes 2279198
chr3 49286481 49286489 MSX1 JASPAR yes 2279199
chr3 49286481 49286489 MSX2 JASPAR yes 2279200
chr3 49286481 49286489 BSX JASPAR yes 70979843
chr3 49286481 49286489 DLX6 JASPAR yes 70979844
chr3 49286481 49286489 MSX1 JASPAR yes 70979845
chr3 49286481 49286489 MSX2 JASPAR yes 70979846
chr3 49286496 49286511 JUND JASPAR yes 2279201
chr3 49286496 49286511 JUND JASPAR yes 70979847
chr3 49286497 49286510 JUN JASPAR yes 2279202
chr3 49286497 49286510 JUN JASPAR yes 70979848
chr3 49286498 49286512 ATF7 JASPAR yes 2279203
chr3 49286498 49286512 BATF3 JASPAR yes 2279204
chr3 49286498 49286512 ATF7 JASPAR yes 70979849
chr3 49286498 49286512 BATF3 JASPAR yes 70979850
chr3 49286499 49286511 JDP2 JASPAR yes 2279205
chr3 49286499 49286511 JDP2 JASPAR yes 70979851
chr3 49286499 49286514 JUND JASPAR yes 2279206
chr3 49286499 49286514 JUND JASPAR yes 70979852
chr3 49286500 49286513 JUN JASPAR yes 2279207
chr3 49286500 49286513 JUN JASPAR yes 70979853
chr3 49286501 49286509 CREB1 JASPAR yes 2279208
chr3 49286501 49286509 CREB1 JASPAR yes 70979854
chr3 49286503 49286513 POU6F2 JASPAR yes 2279209
chr3 49286503 49286513 POU6F2 JASPAR yes 70979855
chr3 49286504 49286508 ESR1 TRANSFAC yes 2279210
chr3 49286504 49286508 ESR1 TRANSFAC yes 70979856
chr3 49286504 49286514 MEOX2 JASPAR yes 2279211
chr3 49286504 49286514 MNX1 JASPAR yes 2279212
chr3 49286504 49286514 MEOX2 JASPAR yes 70979857
chr3 49286504 49286514 MNX1 JASPAR yes 70979858
chr3 49286504 49286515 HOXA10 JASPAR yes 2279213
chr3 49286504 49286515 HOXC11 JASPAR yes 2279214
chr3 49286504 49286515 HOXC12 JASPAR yes 2279215
chr3 49286504 49286515 HOXD12 JASPAR yes 2279216
chr3 49286504 49286515 HOXA10 JASPAR yes 70979859
chr3 49286504 49286515 HOXC11 JASPAR yes 70979860
chr3 49286504 49286515 HOXC12 JASPAR yes 70979861
chr3 49286504 49286515 HOXD12 JASPAR yes 70979862
chr3 49286505 49286513 NKX6-1 JASPAR yes 2279217
chr3 49286505 49286513 NKX6-1 JASPAR yes 70979863
chr3 49286505 49286515 HOXC10 JASPAR yes 2279218
chr3 49286505 49286515 HOXD11 JASPAR yes 2279219
chr3 49286505 49286515 HOXC10 JASPAR yes 70979864
chr3 49286505 49286515 HOXD11 JASPAR yes 70979865
chr3 49286505 49286521 POU4F2 JASPAR yes 2279220
chr3 49286505 49286521 POU4F3 JASPAR yes 2279221
chr3 49286505 49286521 POU4F2 JASPAR yes 70979866
chr3 49286505 49286521 POU4F3 JASPAR yes 70979867
chr3 49286507 49286511 YY1 TRANSFAC yes 2279222
chr3 49286507 49286511 YY1 TRANSFAC yes 70979868
chr3 49286507 49286521 POU4F1 JASPAR yes 2279223
chr3 49286507 49286521 POU4F1 JASPAR yes 70979869
chr3 49286514 49286518 YY1 TRANSFAC yes 2279224
chr3 49286514 49286518 YY1 TRANSFAC yes 70979870
chr3 49286517 49286537 ESR1 JASPAR yes 2279225
chr3 49286517 49286537 ESR1 JASPAR yes 70979871
chr3 49286520 49286538 ESR1 JASPAR yes 2279226
chr3 49286520 49286538 ESR1 JASPAR yes 70979872
chr3 49286539 49286559 ESR1 JASPAR yes 2279227
chr3 49286539 49286559 ESR1 JASPAR yes 70979873
chr3 49286542 49286560 ESR1 JASPAR yes 2279228
chr3 49286542 49286560 ESR2 JASPAR yes 2279229
chr3 49286542 49286560 ESR1 JASPAR yes 70979874
chr3 49286542 49286560 ESR2 JASPAR yes 70979875
chr3 49286544 49286559 ESR2 JASPAR yes 2279230
chr3 49286544 49286559 ESR2 JASPAR yes 70979876
chr3 49286544 49286564 ESR1 JASPAR yes 2279231
chr3 49286544 49286564 ESR1 JASPAR yes 70979877
chr3 49286545 49286549 ESR1 TRANSFAC yes 2279232
chr3 49286545 49286549 ESR1 TRANSFAC yes 70979878
chr3 49286555 49286561 YY1 JASPAR yes 2279233
chr3 49286555 49286561 YY1 JASPAR yes 70979879
chr3 49286566 49286569 MYB TRANSFAC yes 2279234
chr3 49286566 49286569 MYB TRANSFAC yes 70979880
chr3 49286568 49286583 AR JASPAR yes 2279235
chr3 49286568 49286583 AR JASPAR yes 70979881
chr3 49286569 49286579 GABPA JASPAR yes 2279236
chr3 49286569 49286579 GABPA JASPAR yes 70979882
chr3 49286569 49286580 ELF5 JASPAR yes 2279237
chr3 49286569 49286580 ELF5 JASPAR yes 70979883
chr3 49286569 49286582 ELF1 JASPAR yes 2279238
chr3 49286569 49286582 ELF1 JASPAR yes 70979884
SNP sites on vista40874[chr3:49286239-49286578]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr3 49286336 rs149676894 C T
BHLHE23
6724851
chr3 49286394 rs118031176 A G no 6724852
chr3 49286575 rs116628938 C A
AR ELF1 ELF5 GABPA
6724853
Genes possibly regulated by vista40874[chr3:49286239-49286578]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr3 49199968 49203754 - CCDC71 ENSG00000177352.9 49203754 0.61 1.0 3664 17515
chr3 49209044 49213917 + KLHDC8B ENSG00000185909.10 49209044 0.84 0.99 3665 22805
chr3 49215065 49229291 - C3orf84 ENSG00000236980.5 49229291 0.0 0.0 3666 43052
chr3 49235861 49295537 + CCDC36 ENSG00000173421.12 49235861 0.86 0.92 3667 49622
chr3 49297518 49298744 + RP11-3B7.1 ENSG00000225399.3 49297518 0.89 0.0 3668 89060
chr3 49306035 49315342 - C3orf62 ENSG00000188315.3 49315342 0.67 0.99 3669 71236
chr3 49315264 49378145 - USP4 ENSG00000114316.8 49378145 0.67 1.0 3670 8433
Expression level of Genes
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miRNAs possibly regulated by vista40874[chr3:49286239-49286578]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results