EnhancerDB
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  3. vista40875[chr3:49347058-49347335]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista40875[chr3:49347058-49347335]
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Tissue distribution of vista40875
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Transcription factor that possibly regulate vista40875[chr3:49347058-49347335]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr3 49347046 49347067 IRF1 JASPAR yes 2281732
chr3 49347046 49347067 IRF1 JASPAR yes 70979885
chr3 49347049 49347070 IRF1 JASPAR yes 2281733
chr3 49347049 49347070 IRF1 JASPAR yes 70979886
chr3 49347050 49347071 IRF1 JASPAR yes 2281734
chr3 49347050 49347071 IRF1 JASPAR yes 70979887
chr3 49347051 49347066 FOXP1 JASPAR yes 2281735
chr3 49347051 49347066 FOXP1 JASPAR yes 70979888
chr3 49347051 49347072 IRF1 JASPAR yes 2281736
chr3 49347051 49347072 IRF1 JASPAR yes 70979889
chr3 49347052 49347067 FOXP1 JASPAR yes 2281737
chr3 49347052 49347067 FOXP1 JASPAR yes 70979890
chr3 49347052 49347073 IRF1 JASPAR yes 2281738
chr3 49347052 49347073 IRF1 JASPAR yes 70979891
chr3 49347053 49347068 FOXP1 JASPAR yes 2281739
chr3 49347053 49347068 FOXP1 JASPAR yes 70979892
chr3 49347053 49347074 IRF1 JASPAR yes 2281740
chr3 49347053 49347074 IRF1 JASPAR yes 70979893
chr3 49347054 49347069 FOXP1 JASPAR yes 2281741
chr3 49347054 49347069 FOXP1 JASPAR yes 70979894
chr3 49347054 49347075 IRF1 JASPAR yes 2281742
chr3 49347054 49347075 IRF1 JASPAR yes 70979895
chr3 49347055 49347070 FOXP1 JASPAR yes 2281743
chr3 49347055 49347070 FOXP1 JASPAR yes 70979896
chr3 49347055 49347076 IRF1 JASPAR yes 2281744
chr3 49347055 49347076 IRF1 JASPAR yes 70979897
chr3 49347056 49347071 FOXP1 JASPAR yes 2281745
chr3 49347056 49347071 FOXP1 JASPAR yes 70979898
chr3 49347056 49347077 IRF1 JASPAR yes 2281746
chr3 49347056 49347077 IRF1 JASPAR yes 70979899
chr3 49347057 49347072 FOXP1 JASPAR yes 2281747
chr3 49347057 49347072 FOXP1 JASPAR yes 70979900
chr3 49347058 49347073 FOXP1 JASPAR yes 2281748
chr3 49347058 49347073 FOXP1 JASPAR yes 70979901
chr3 49347059 49347074 FOXP1 JASPAR yes 2281749
chr3 49347059 49347074 FOXP1 JASPAR yes 70979902
chr3 49347060 49347075 FOXP1 JASPAR yes 2281750
chr3 49347060 49347075 FOXP1 JASPAR yes 70979903
chr3 49347061 49347076 FOXP1 JASPAR yes 2281751
chr3 49347061 49347076 FOXP1 JASPAR yes 70979904
chr3 49347062 49347077 FOXP1 JASPAR yes 2281752
chr3 49347062 49347077 FOXP1 JASPAR yes 70979905
chr3 49347063 49347078 FOXP1 JASPAR yes 2281753
chr3 49347063 49347078 FOXP1 JASPAR yes 70979906
chr3 49347066 49347081 MEF2C JASPAR yes 2281754
chr3 49347066 49347081 MEF2C JASPAR yes 70979907
chr3 49347079 49347100 IRF1 JASPAR yes 2281755
chr3 49347079 49347100 IRF1 JASPAR yes 70979908
chr3 49347083 49347098 IRF9 JASPAR yes 2281756
chr3 49347083 49347098 IRF9 JASPAR yes 70979909
chr3 49347110 49347119 SOX9 JASPAR yes 2281757
chr3 49347110 49347119 SOX9 JASPAR yes 70979910
chr3 49347114 49347125 CEBPA JASPAR yes 2281758
chr3 49347114 49347125 CEBPA JASPAR yes 70979911
chr3 49347114 49347126 HLF JASPAR yes 2281759
chr3 49347114 49347126 HLF JASPAR yes 70979912
chr3 49347115 49347125 CEBPB JASPAR yes 2281760
chr3 49347115 49347125 CEBPD JASPAR yes 2281761
chr3 49347115 49347125 CEBPE JASPAR yes 2281762
chr3 49347115 49347125 CEBPG JASPAR yes 2281763
chr3 49347115 49347125 CEBPB JASPAR yes 70979913
chr3 49347115 49347125 CEBPD JASPAR yes 70979914
chr3 49347115 49347125 CEBPE JASPAR yes 70979915
chr3 49347115 49347125 CEBPG JASPAR yes 70979916
chr3 49347115 49347126 CEBPB JASPAR yes 2281764
chr3 49347115 49347126 CEBPB JASPAR yes 70979917
chr3 49347127 49347144 ESR1 JASPAR yes 2281765
chr3 49347127 49347144 ESR1 JASPAR yes 70979918
chr3 49347145 49347156 EBF1 JASPAR yes 2281766
chr3 49347145 49347156 EBF1 JASPAR yes 70979919
chr3 49347228 49347243 MEF2A JASPAR yes 2281767
chr3 49347228 49347243 MEF2A JASPAR yes 70979920
chr3 49347229 49347244 MEF2C JASPAR yes 2281768
chr3 49347229 49347244 MEF2C JASPAR yes 70979921
chr3 49347230 49347242 MEF2A JASPAR yes 2281769
chr3 49347230 49347242 MEF2B JASPAR yes 2281770
chr3 49347230 49347242 MEF2D JASPAR yes 2281771
chr3 49347230 49347242 MEF2A JASPAR yes 70979922
chr3 49347230 49347242 MEF2B JASPAR yes 70979923
chr3 49347230 49347242 MEF2D JASPAR yes 70979924
chr3 49347232 49347236 YY1 TRANSFAC yes 2281772
chr3 49347232 49347236 YY1 TRANSFAC yes 70979925
chr3 49347246 49347260 TLX1 JASPAR yes 2281773
chr3 49347246 49347260 TLX1 JASPAR yes 70979926
chr3 49347253 49347265 YY1 JASPAR yes 2281774
chr3 49347253 49347265 YY1 JASPAR yes 70979927
chr3 49347275 49347293 RARA JASPAR yes 2281775
chr3 49347275 49347293 RARA JASPAR yes 70979928
chr3 49347282 49347295 NR2F1 JASPAR yes 2281776
chr3 49347282 49347295 NR2F1 JASPAR yes 70979929
chr3 49347286 49347294 CREB1 JASPAR yes 2281777
chr3 49347286 49347294 CREB1 JASPAR yes 70979930
chr3 49347297 49347302 GATA2 JASPAR yes 2281778
chr3 49347297 49347302 GATA2 JASPAR yes 70979931
chr3 49347298 49347304 ZNF354C JASPAR yes 2281779
chr3 49347298 49347304 ZNF354C JASPAR yes 70979932
SNP sites on vista40875[chr3:49347058-49347335]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr3 49347089 rs186251853 C T
IRF1 IRF9
6725057
chr3 49347147 rs55677747 T C
EBF1
6725058
chr3 49347163 rs565173636 G A no 6725059
Genes possibly regulated by vista40875[chr3:49347058-49347335]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr3 49297518 49298744 + RP11-3B7.1 ENSG00000225399.3 49297518 0.89 0.0 3668 50460
chr3 49306035 49315342 - C3orf62 ENSG00000188315.3 49315342 0.67 0.99 3669 68284
chr3 49315264 49378145 - USP4 ENSG00000114316.8 49378145 0.67 1.0 3670 69190
chr3 49394609 49396033 - GPX1 ENSG00000233276.2 49396033 0.77 1.0 3671 51302
Expression level of Genes
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miRNAs possibly regulated by vista40875[chr3:49347058-49347335]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results