EnhancerDB
  1. Home
  2. Enhancers
  3. vista40884[chr3:49938038-49938186]
View enhancers around input chromosomal region
Back to top

Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista40884[chr3:49938038-49938186]
Back to top
Tissue distribution of vista40884
Back to top
Transcription factor that possibly regulate vista40884[chr3:49938038-49938186]
Back to top
Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr3 49938020 49938792 POLR2A UCSC Txn Factor no Conserved 108529157
chr3 49938028 49938048 RREB1 JASPAR yes 2308382
chr3 49938028 49938048 RREB1 JASPAR yes 70980272
chr3 49938033 49938043 SP1 JASPAR yes 2308383
chr3 49938033 49938043 SP1 JASPAR yes 70980273
chr3 49938036 49938041 SP1 TRANSFAC yes 2308384
chr3 49938036 49938041 SP1 TRANSFAC yes 70980274
chr3 49938037 49938047 SP1 JASPAR yes 2308385
chr3 49938037 49938047 SP1 JASPAR yes 70980275
chr3 49938040 49938045 SP1 TRANSFAC yes 2308386
chr3 49938040 49938045 SP1 TRANSFAC yes 70980276
chr3 49938042 49938047 TFAP2A TRANSFAC yes 2308387
chr3 49938042 49938047 TFAP2A TRANSFAC yes 70980277
chr3 49938042 49938048 MZF1 JASPAR yes 2308388
chr3 49938042 49938048 MZF1 JASPAR yes 70980278
chr3 49938043 49938053 SP1 JASPAR yes 2308389
chr3 49938043 49938053 SP1 JASPAR yes 70980279
chr3 49938068 49938081 ELF1 JASPAR yes 2308390
chr3 49938068 49938081 ELF1 JASPAR yes 70980280
chr3 49938071 49938082 FLI1 JASPAR yes 2308391
chr3 49938071 49938082 FLI1 JASPAR yes 70980281
chr3 49938072 49938080 FEV JASPAR yes 2308392
chr3 49938072 49938080 FEV JASPAR yes 70980282
chr3 49938096 49938106 ELK1 JASPAR yes 2308393
chr3 49938096 49938106 ELK1 JASPAR yes 70980283
chr3 49938098 49938108 GABPA JASPAR yes 2308394
chr3 49938098 49938108 GABPA JASPAR yes 70980284
chr3 49938100 49938106 ETS1 JASPAR yes 2308395
chr3 49938100 49938106 SPI1 JASPAR yes 2308396
chr3 49938100 49938106 ETS1 JASPAR yes 70980285
chr3 49938100 49938106 SPI1 JASPAR yes 70980286
chr3 49938107 49938120 ZBTB18 JASPAR yes 2308397
chr3 49938107 49938120 ZBTB18 JASPAR yes 70980287
chr3 49938109 49938119 FIGLA JASPAR yes 2308398
chr3 49938109 49938119 ID4 JASPAR yes 2308399
chr3 49938109 49938119 TCF3 JASPAR yes 2308400
chr3 49938109 49938119 TCF4 JASPAR yes 2308401
chr3 49938109 49938119 FIGLA JASPAR yes 70980288
chr3 49938109 49938119 ID4 JASPAR yes 70980289
chr3 49938109 49938119 TCF3 JASPAR yes 70980290
chr3 49938109 49938119 TCF4 JASPAR yes 70980291
chr3 49938120 49938134 JUN JASPAR yes 2308402
chr3 49938120 49938134 JUN JASPAR yes 70980292
chr3 49938122 49938133 BATF JASPAR yes 2308403
chr3 49938122 49938133 BATF JASPAR yes 70980293
chr3 49938123 49938134 FOSL2 JASPAR yes 2308404
chr3 49938123 49938134 JUNB JASPAR yes 2308405
chr3 49938123 49938134 FOSL2 JASPAR yes 70980294
chr3 49938123 49938134 JUNB JASPAR yes 70980295
chr3 49938124 49938135 FOS JASPAR yes 2308406
chr3 49938124 49938135 FOSL1 JASPAR yes 2308407
chr3 49938124 49938135 JUND JASPAR yes 2308408
chr3 49938124 49938135 NFE2 JASPAR yes 2308409
chr3 49938124 49938135 FOS JASPAR yes 70980296
chr3 49938124 49938135 FOSL1 JASPAR yes 70980297
chr3 49938124 49938135 JUND JASPAR yes 70980298
chr3 49938124 49938135 NFE2 JASPAR yes 70980299
chr3 49938125 49938134 JDP2 JASPAR yes 2308410
chr3 49938125 49938134 JDP2 JASPAR yes 70980300
chr3 49938135 49938144 SNAI2 JASPAR yes 2308411
chr3 49938135 49938144 SNAI2 JASPAR yes 70980301
chr3 49938135 49938145 FIGLA JASPAR yes 2308412
chr3 49938135 49938145 TCF4 JASPAR yes 2308413
chr3 49938135 49938145 FIGLA JASPAR yes 70980302
chr3 49938135 49938145 TCF4 JASPAR yes 70980303
chr3 49938137 49938146 ZEB1 JASPAR yes 2308414
chr3 49938137 49938146 ZEB1 JASPAR yes 70980304
chr3 49938139 49938144 SP1 TRANSFAC yes 2308415
chr3 49938139 49938144 SP1 TRANSFAC yes 70980305
SNP sites on vista40884[chr3:49938038-49938186]
Back to top
chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr3 49938081 rs116996441 C A,T
ELF1 FLI1 POLR2A
6727159
Genes possibly regulated by vista40884[chr3:49938038-49938186]
Back to top
Details of Genes
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr3 49840687 49842463 + FAM212A ENSG00000185614.4 49840687 0.69 0.99 3685 2649
chr3 49842640 49851379 - UBA7 ENSG00000182179.6 49851379 0.73 0.99 3686 13341
chr3 49866034 49894007 - TRAIP ENSG00000183763.4 49894007 0.9 1.0 3687 55969
chr3 49895421 49907655 - CAMKV ENSG00000164076.12 49907655 0.86 0.88 3688 69617
chr3 49924435 49941299 - MST1R ENSG00000164078.8 49941299 0.93 1.0 3689 96887
chr3 49941278 49954370 + CTD-2330K9.3 ENSG00000228008.1 49941278 0.79 1.0 3690 96908
chr3 49946302 49967606 - MON1A ENSG00000164077.9 49967606 0.54 1.0 3691 70580
chr3 49977440 50137478 + RBM6 ENSG00000004534.10 49977440 0.57 0.99 3692 60746
Expression level of Genes
Back to top
miRNAs possibly regulated by vista40884[chr3:49938038-49938186]
Back to top
Details of miRNAs
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
Back to top
No results