EnhancerDB
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  3. vista40886[chr3:50040739-50040850]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista40886[chr3:50040739-50040850]
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Tissue distribution of vista40886
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Transcription factor that possibly regulate vista40886[chr3:50040739-50040850]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr3 50040739 50040754 FOXP1 JASPAR yes 70980312
chr3 50040740 50040746 TBP TRANSFAC yes 70980313
chr3 50040740 50040755 FOXP1 JASPAR yes 70980314
chr3 50040740 50040761 IRF1 JASPAR yes 70980315
chr3 50040741 50040756 FOXP1 JASPAR yes 70980316
chr3 50040741 50040762 IRF1 JASPAR yes 70980317
chr3 50040742 50040757 FOXP1 JASPAR yes 70980318
chr3 50040742 50040763 IRF1 JASPAR yes 70980319
chr3 50040743 50040758 FOXP1 JASPAR yes 70980320
chr3 50040743 50040764 IRF1 JASPAR yes 70980321
chr3 50040744 50040759 FOXP1 JASPAR yes 70980322
chr3 50040744 50040765 IRF1 JASPAR yes 70980323
chr3 50040745 50040760 FOXP1 JASPAR yes 70980324
chr3 50040745 50040766 IRF1 JASPAR yes 70980325
chr3 50040746 50040761 FOXP1 JASPAR yes 70980326
chr3 50040746 50040767 IRF1 JASPAR yes 70980327
chr3 50040747 50040762 FOXP1 JASPAR yes 70980328
chr3 50040747 50040768 IRF1 JASPAR yes 70980329
chr3 50040748 50040763 FOXP1 JASPAR yes 70980330
chr3 50040749 50040764 FOXP1 JASPAR yes 70980331
chr3 50040750 50040765 FOXP1 JASPAR yes 70980332
chr3 50040750 50040771 IRF1 JASPAR yes 70980333
chr3 50040751 50040766 FOXP1 JASPAR yes 70980334
chr3 50040754 50040769 STAT2 JASPAR yes 70980335
chr3 50040767 50040773 SOX10 JASPAR yes 70980336
chr3 50040773 50040777 NFE TRANSFAC yes 70980337
chr3 50040774 50040779 GATA2 JASPAR yes 70980338
chr3 50040791 50040798 NKX3-1 JASPAR yes 70980339
chr3 50040814 50040828 JUN JASPAR yes 70980340
chr3 50040816 50040827 BATF JASPAR yes 70980341
chr3 50040818 50040829 FOS JASPAR yes 70980342
chr3 50040818 50040829 FOSL1 JASPAR yes 70980343
chr3 50040818 50040829 JUND JASPAR yes 70980344
chr3 50040819 50040830 FOSL2 JASPAR yes 70980345
chr3 50040819 50040830 JUNB JASPAR yes 70980346
chr3 50040819 50040833 JUN JASPAR yes 70980347
chr3 50040819 50040837 ESR1 JASPAR yes 70980348
chr3 50040819 50040837 ESR2 JASPAR yes 70980349
chr3 50040834 50040849 RFX5 JASPAR yes 70980350
chr3 50040837 50040846 NFIX JASPAR yes 70980351
chr3 50040838 50040844 NFIC JASPAR yes 70980352
SNP sites on vista40886[chr3:50040739-50040850]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr3 50040741 rs369715959 TAA T
FOXP1 IRF1 TBP
6727446
chr3 50040741 rs577352550 TAA T
FOXP1 IRF1 TBP
6727447
chr3 50040741 rs757908932 TAA T
FOXP1 IRF1 TBP
6727448
Genes possibly regulated by vista40886[chr3:50040739-50040850]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr3 49924435 49941299 - MST1R ENSG00000164078.8 49941299 0.93 1.0 3689 560
chr3 49941278 49954370 + CTD-2330K9.3 ENSG00000228008.1 49941278 0.79 1.0 3690 539
chr3 49946302 49967606 - MON1A ENSG00000164077.9 49967606 0.54 1.0 3691 26867
chr3 49977440 50137478 + RBM6 ENSG00000004534.10 49977440 0.57 0.99 3692 36701
chr3 50126341 50156454 + RBM5 ENSG00000003756.12 50126341 0.7 1.0 3693 14509
Expression level of Genes
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miRNAs possibly regulated by vista40886[chr3:50040739-50040850]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results