EnhancerDB
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  3. vista40889[chr3:50194710-50194859]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista40889[chr3:50194710-50194859]
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Tissue distribution of vista40889
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Transcription factor that possibly regulate vista40889[chr3:50194710-50194859]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr3 50194196 50194936 POLR2A UCSC Txn Factor no Conserved 108529158
chr3 50194737 50194743 LEF1 TRANSFAC yes 2317688
chr3 50194737 50194743 SOX10 JASPAR yes 2317689
chr3 50194737 50194743 LEF1 TRANSFAC yes 70980390
chr3 50194737 50194743 SOX10 JASPAR yes 70980391
chr3 50194750 50194771 ZNF263 JASPAR yes 2317690
chr3 50194750 50194771 ZNF263 JASPAR yes 70980392
chr3 50194754 50194775 ZNF263 JASPAR yes 2317691
chr3 50194754 50194775 ZNF263 JASPAR yes 70980393
chr3 50194758 50194779 ZNF263 JASPAR yes 2317692
chr3 50194758 50194779 ZNF263 JASPAR yes 70980394
chr3 50194761 50194782 ZNF263 JASPAR yes 2317693
chr3 50194761 50194782 ZNF263 JASPAR yes 70980395
chr3 50194762 50194773 E2F6 JASPAR yes 2317694
chr3 50194762 50194773 E2F6 JASPAR yes 70980396
chr3 50194762 50194783 ZNF263 JASPAR yes 2317695
chr3 50194762 50194783 ZNF263 JASPAR yes 70980397
chr3 50194765 50194786 ZNF263 JASPAR yes 2317696
chr3 50194765 50194786 ZNF263 JASPAR yes 70980398
chr3 50194767 50194788 ZNF263 JASPAR yes 2317697
chr3 50194767 50194788 ZNF263 JASPAR yes 70980399
chr3 50194769 50194790 ZNF263 JASPAR yes 2317698
chr3 50194769 50194790 ZNF263 JASPAR yes 70980400
chr3 50194772 50194793 ZNF263 JASPAR yes 2317699
chr3 50194772 50194793 ZNF263 JASPAR yes 70980401
chr3 50194773 50194784 E2F6 JASPAR yes 2317700
chr3 50194773 50194784 E2F6 JASPAR yes 70980402
chr3 50194775 50194796 ZNF263 JASPAR yes 2317701
chr3 50194775 50194796 ZNF263 JASPAR yes 70980403
chr3 50194776 50194797 ZNF263 JASPAR yes 2317702
chr3 50194776 50194797 ZNF263 JASPAR yes 70980404
chr3 50194783 50194793 SP1 JASPAR yes 2317703
chr3 50194783 50194793 SP1 JASPAR yes 70980405
chr3 50194786 50194807 ZNF263 JASPAR yes 2317704
chr3 50194786 50194807 ZNF263 JASPAR yes 70980406
chr3 50194787 50194798 E2F6 JASPAR yes 2317705
chr3 50194787 50194798 E2F6 JASPAR yes 70980407
chr3 50194787 50194808 ZNF263 JASPAR yes 2317706
chr3 50194787 50194808 ZNF263 JASPAR yes 70980408
chr3 50194790 50194811 ZNF263 JASPAR yes 2317707
chr3 50194790 50194811 ZNF263 JASPAR yes 70980409
chr3 50194791 50194802 E2F4 JASPAR yes 2317708
chr3 50194791 50194802 E2F6 JASPAR yes 2317709
chr3 50194791 50194802 E2F4 JASPAR yes 70980410
chr3 50194791 50194802 E2F6 JASPAR yes 70980411
chr3 50194791 50194812 ZNF263 JASPAR yes 2317710
chr3 50194791 50194812 ZNF263 JASPAR yes 70980412
chr3 50194792 50194803 E2F1 JASPAR yes 2317711
chr3 50194792 50194803 E2F1 JASPAR yes 70980413
chr3 50194802 50194813 E2F6 JASPAR yes 2317712
chr3 50194802 50194813 E2F6 JASPAR yes 70980414
chr3 50194802 50194823 ZNF263 JASPAR yes 2317713
chr3 50194802 50194823 ZNF263 JASPAR yes 70980415
chr3 50194803 50194824 ZNF263 JASPAR yes 2317714
chr3 50194803 50194824 ZNF263 JASPAR yes 70980416
chr3 50194814 50194825 E2F6 JASPAR yes 2317715
chr3 50194814 50194825 E2F6 JASPAR yes 70980417
chr3 50194814 50194835 ZNF263 JASPAR yes 2317716
chr3 50194814 50194835 ZNF263 JASPAR yes 70980418
chr3 50194818 50194839 ZNF263 JASPAR yes 2317717
chr3 50194818 50194839 ZNF263 JASPAR yes 70980419
chr3 50194822 50194843 ZNF263 JASPAR yes 2317718
chr3 50194822 50194843 ZNF263 JASPAR yes 70980420
chr3 50194829 50194850 ZNF263 JASPAR yes 2317719
chr3 50194829 50194850 ZNF263 JASPAR yes 70980421
chr3 50194830 50194838 EHF JASPAR yes 2317720
chr3 50194830 50194838 EHF JASPAR yes 70980422
chr3 50194832 50194837 ETS2 TRANSFAC yes 2317721
chr3 50194832 50194837 ETS2 TRANSFAC yes 70980423
chr3 50194834 50194845 E2F6 JASPAR yes 2317722
chr3 50194834 50194845 E2F6 JASPAR yes 70980424
chr3 50194834 50194855 ZNF263 JASPAR yes 2317723
chr3 50194834 50194855 ZNF263 JASPAR yes 70980425
chr3 50194835 50194856 ZNF263 JASPAR yes 2317724
chr3 50194835 50194856 ZNF263 JASPAR yes 70980426
chr3 50194838 50194859 ZNF263 JASPAR yes 2317725
chr3 50194838 50194859 ZNF263 JASPAR yes 70980427
SNP sites on vista40889[chr3:50194710-50194859]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr3 50194726 rs575956030 GGCTCCTC G
POLR2A
6727823
Genes possibly regulated by vista40889[chr3:50194710-50194859]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr3 50126341 50156454 + RBM5 ENSG00000003756.12 50126341 0.7 1.0 3693 31631
chr3 50192478 50226508 + SEMA3F ENSG00000001617.7 50192478 0.81 1.0 3694 97768
chr3 50229045 50233949 + GNAT1 ENSG00000114349.5 50229045 0.89 1.0 3695 65814
chr3 50263724 50296787 + GNAI2 ENSG00000114353.12 50263724 0.7 1.0 3696 31135
Expression level of Genes
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miRNAs possibly regulated by vista40889[chr3:50194710-50194859]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results