EnhancerDB
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  3. vista40891[chr3:50204265-50204566]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista40891[chr3:50204265-50204566]
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Tissue distribution of vista40891
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Transcription factor that possibly regulate vista40891[chr3:50204265-50204566]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr3 50204272 50204277 TFAP2A TRANSFAC yes 2318847
chr3 50204272 50204277 TFAP2A TRANSFAC yes 70980461
chr3 50204272 50204278 MZF1 JASPAR yes 2318848
chr3 50204272 50204278 MZF1 JASPAR yes 70980462
chr3 50204272 50204293 ZNF263 JASPAR yes 2318849
chr3 50204272 50204293 ZNF263 JASPAR yes 70980463
chr3 50204275 50204285 SP1 JASPAR yes 2318850
chr3 50204275 50204285 SP1 JASPAR yes 70980464
chr3 50204275 50204296 ZNF263 JASPAR yes 2318851
chr3 50204275 50204296 ZNF263 JASPAR yes 70980465
chr3 50204278 50204299 ZNF263 JASPAR yes 2318852
chr3 50204278 50204299 ZNF263 JASPAR yes 70980466
chr3 50204281 50204302 ZNF263 JASPAR yes 2318853
chr3 50204281 50204302 ZNF263 JASPAR yes 70980467
chr3 50204284 50204305 ZNF263 JASPAR yes 2318854
chr3 50204284 50204305 ZNF263 JASPAR yes 70980468
chr3 50204287 50204308 ZNF263 JASPAR yes 2318855
chr3 50204287 50204308 ZNF263 JASPAR yes 70980469
chr3 50204290 50204296 PEA3 TRANSFAC yes 2318856
chr3 50204290 50204296 PEA3 TRANSFAC yes 70980470
chr3 50204290 50204311 ZNF263 JASPAR yes 2318857
chr3 50204290 50204311 ZNF263 JASPAR yes 70980471
chr3 50204291 50204299 EHF JASPAR yes 2318858
chr3 50204291 50204299 EHF JASPAR yes 70980472
chr3 50204308 50204314 ETS1 JASPAR yes 2318859
chr3 50204308 50204314 ETS1 JASPAR yes 70980473
chr3 50204308 50204318 ELK1 JASPAR yes 2318860
chr3 50204308 50204318 ELK1 JASPAR yes 70980474
chr3 50204320 50204332 TEAD1 JASPAR yes 2318861
chr3 50204320 50204332 TEAD1 JASPAR yes 70980475
chr3 50204322 50204332 TEAD1 JASPAR yes 2318862
chr3 50204322 50204332 TEAD4 JASPAR yes 2318863
chr3 50204322 50204332 TEAD1 JASPAR yes 70980476
chr3 50204322 50204332 TEAD4 JASPAR yes 70980477
chr3 50204323 50204331 TEAD3 JASPAR yes 2318864
chr3 50204323 50204331 TEF-1 TRANSFAC yes 2318865
chr3 50204323 50204331 TEAD3 JASPAR yes 70980478
chr3 50204323 50204331 TEF-1 TRANSFAC yes 70980479
chr3 50204325 50204346 ZNF263 JASPAR yes 2318866
chr3 50204325 50204346 ZNF263 JASPAR yes 70980480
chr3 50204329 50204339 SP1 JASPAR yes 2318867
chr3 50204329 50204339 SP1 JASPAR yes 70980481
chr3 50204332 50204342 SP1 JASPAR yes 2318868
chr3 50204332 50204342 SP1 JASPAR yes 70980482
chr3 50204340 50204353 NFKB1 JASPAR yes 2318869
chr3 50204340 50204353 NFKB1 JASPAR yes 70980483
chr3 50204341 50204346 SP1 TRANSFAC yes 2318870
chr3 50204341 50204346 SP1 TRANSFAC yes 70980484
chr3 50204344 50204358 PLAG1 JASPAR yes 2318871
chr3 50204344 50204358 PLAG1 JASPAR yes 70980485
chr3 50204345 50204349 H4TF2 TRANSFAC yes 2318872
chr3 50204345 50204349 H4TF2 TRANSFAC yes 70980486
chr3 50204347 50204360 TFAP2A JASPAR yes 2318873
chr3 50204347 50204360 TFAP2B JASPAR yes 2318874
chr3 50204347 50204360 TFAP2C JASPAR yes 2318875
chr3 50204347 50204360 TFAP2A JASPAR yes 70980487
chr3 50204347 50204360 TFAP2B JASPAR yes 70980488
chr3 50204347 50204360 TFAP2C JASPAR yes 70980489
chr3 50204348 50204362 PLAG1 JASPAR yes 2318876
chr3 50204348 50204362 PLAG1 JASPAR yes 70980490
chr3 50204350 50204359 TFAP2A JASPAR yes 2318877
chr3 50204350 50204359 TFAP2A JASPAR yes 70980491
chr3 50204354 50204359 SP1 TRANSFAC yes 2318878
chr3 50204354 50204359 SP1 TRANSFAC yes 70980492
chr3 50204355 50204369 NR2F1 JASPAR yes 2318879
chr3 50204355 50204369 NR2F1 JASPAR yes 70980493
chr3 50204384 50204399 HNF4A JASPAR yes 2318880
chr3 50204384 50204399 HNF4A JASPAR yes 70980494
chr3 50204387 50204402 PRDM1 JASPAR yes 2318881
chr3 50204387 50204402 PRDM1 JASPAR yes 70980495
chr3 50204399 50204405 MZF1 JASPAR yes 2318882
chr3 50204399 50204405 MZF1 JASPAR yes 70980496
chr3 50204400 50204409 ZEB1 JASPAR yes 2318883
chr3 50204400 50204409 ZEB1 JASPAR yes 70980497
chr3 50204403 50204408 USF2 TRANSFAC yes 2318884
chr3 50204403 50204408 USF2 TRANSFAC yes 70980498
chr3 50204408 50204422 JUN JASPAR yes 2318885
chr3 50204408 50204422 JUN JASPAR yes 70980499
chr3 50204409 50204415 HiNF-A TRANSFAC yes 2318886
chr3 50204409 50204415 HiNF-A TRANSFAC yes 70980500
chr3 50204410 50204421 BATF JASPAR yes 2318887
chr3 50204410 50204421 DUX4 JASPAR yes 2318888
chr3 50204410 50204421 BATF JASPAR yes 70980501
chr3 50204410 50204421 DUX4 JASPAR yes 70980502
chr3 50204412 50204423 FOS JASPAR yes 2318889
chr3 50204412 50204423 JUND JASPAR yes 2318890
chr3 50204412 50204423 FOS JASPAR yes 70980503
chr3 50204412 50204423 JUND JASPAR yes 70980504
chr3 50204414 50204420 JUN TRANSFAC yes 2318891
chr3 50204414 50204420 JUN TRANSFAC yes 70980505
chr3 50204436 50204454 NR3C1 JASPAR yes 2318892
chr3 50204436 50204454 NR3C1 JASPAR yes 70980506
chr3 50204450 50204460 NFATC3 JASPAR yes 2318893
chr3 50204450 50204460 NFATC3 JASPAR yes 70980507
chr3 50204452 50204473 ZNF263 JASPAR yes 2318894
chr3 50204452 50204473 ZNF263 JASPAR yes 70980508
chr3 50204476 50204480 LFA1 TRANSFAC yes 2318895
chr3 50204476 50204480 LFA1 TRANSFAC yes 70980509
chr3 50204479 50204489 TEAD1 JASPAR yes 2318896
chr3 50204479 50204489 TEAD4 JASPAR yes 2318897
chr3 50204479 50204489 TEAD1 JASPAR yes 70980510
chr3 50204479 50204489 TEAD4 JASPAR yes 70980511
chr3 50204479 50204491 TEAD1 JASPAR yes 2318898
chr3 50204479 50204491 TEAD1 JASPAR yes 70980512
chr3 50204480 50204488 TEAD3 JASPAR yes 2318899
chr3 50204480 50204488 TEAD3 JASPAR yes 70980513
chr3 50204497 50204517 TP53 JASPAR yes 2318900
chr3 50204497 50204517 TP53 JASPAR yes 70980514
chr3 50204498 50204513 TP53 JASPAR yes 2318901
chr3 50204498 50204513 TP53 JASPAR yes 70980515
chr3 50204505 50204509 ESR1 TRANSFAC yes 2318902
chr3 50204505 50204509 ESR1 TRANSFAC yes 70980516
chr3 50204510 50204531 ZNF263 JASPAR yes 2318903
chr3 50204510 50204531 ZNF263 JASPAR yes 70980517
chr3 50204512 50204523 E2F6 JASPAR yes 2318904
chr3 50204512 50204523 E2F6 JASPAR yes 70980518
chr3 50204515 50204530 ZIC3 JASPAR yes 2318905
chr3 50204515 50204530 ZIC3 JASPAR yes 70980519
chr3 50204518 50204532 GLIS3 JASPAR yes 2318906
chr3 50204518 50204532 ZIC1 JASPAR yes 2318907
chr3 50204518 50204532 GLIS3 JASPAR yes 70980520
chr3 50204518 50204532 ZIC1 JASPAR yes 70980521
chr3 50204543 50204560 NR3C1 JASPAR yes 2318908
chr3 50204543 50204560 NR3C1 JASPAR yes 70980522
chr3 50204545 50204560 AR JASPAR yes 2318909
chr3 50204545 50204560 AR JASPAR yes 70980523
SNP sites on vista40891[chr3:50204265-50204566]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr3 50204275 rs370044682 GGGA G
MZF1 SP1 TFAP2A ZNF263
6727899
chr3 50204275 rs541239922 G A
MZF1 SP1 TFAP2A ZNF263
6727900
chr3 50204309 rs559879635 T C
ELK1 ETS1 ZNF263
6727901
chr3 50204314 rs531269513 G A
ELK1 ETS1
6727902
chr3 50204354 rs548261180 G A
PLAG1 SP1 TFAP2A TFAP2B TFAP2C
6727903
Genes possibly regulated by vista40891[chr3:50204265-50204566]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr3 50126341 50156454 + RBM5 ENSG00000003756.12 50126341 0.7 1.0 3693 22076
chr3 50192478 50226508 + SEMA3F ENSG00000001617.7 50192478 0.81 1.0 3694 88213
chr3 50229045 50233949 + GNAT1 ENSG00000114349.5 50229045 0.89 1.0 3695 75521
chr3 50263724 50296787 + GNAI2 ENSG00000114353.12 50263724 0.7 1.0 3696 40842
Expression level of Genes
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miRNAs possibly regulated by vista40891[chr3:50204265-50204566]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results