EnhancerDB
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  3. vista40892[chr3:50204844-50205012]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista40892[chr3:50204844-50205012]
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Tissue distribution of vista40892
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Transcription factor that possibly regulate vista40892[chr3:50204844-50205012]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr3 50204784 50205028 ESR1 UCSC Txn Factor no Conserved 108529162
chr3 50204988 50205192 FOXA2 UCSC Txn Factor no Conserved 108529163
chr3 50204989 50205214 FOXA1 UCSC Txn Factor no Conserved 108529164
chr3 50204853 50204864 NFE2L2 JASPAR yes 2318930
chr3 50204853 50204864 NFE2L2 JASPAR yes 70980524
chr3 50204860 50204873 ELF3 JASPAR yes 2318931
chr3 50204860 50204873 ELF3 JASPAR yes 70980525
chr3 50204861 50204875 SPI1 JASPAR yes 2318932
chr3 50204861 50204875 SPI1 JASPAR yes 70980526
chr3 50204867 50204878 NFKB1 JASPAR yes 2318933
chr3 50204867 50204878 NFKB1 JASPAR yes 70980527
chr3 50204870 50204883 ELF1 JASPAR yes 2318934
chr3 50204870 50204883 ELF1 JASPAR yes 70980528
chr3 50204895 50204907 TFAP2A JASPAR yes 2318935
chr3 50204895 50204907 TFAP2A JASPAR yes 70980529
chr3 50204905 50204909 NFE TRANSFAC yes 2318936
chr3 50204905 50204909 NFE TRANSFAC yes 70980530
chr3 50204906 50204911 GATA2 JASPAR yes 2318937
chr3 50204906 50204911 GATA2 JASPAR yes 70980531
chr3 50204910 50204914 NFE TRANSFAC yes 2318938
chr3 50204910 50204914 NFE TRANSFAC yes 70980532
chr3 50204917 50204922 SP1 TRANSFAC yes 2318939
chr3 50204917 50204922 SP1 TRANSFAC yes 70980533
chr3 50204928 50204947 PAX5 JASPAR yes 2318940
chr3 50204928 50204947 PAX5 JASPAR yes 70980534
chr3 50204931 50204948 PAX1 JASPAR yes 2318941
chr3 50204931 50204948 PAX9 JASPAR yes 2318942
chr3 50204931 50204948 PAX1 JASPAR yes 70980535
chr3 50204931 50204948 PAX9 JASPAR yes 70980536
chr3 50204938 50204943 SP1 TRANSFAC yes 2318943
chr3 50204938 50204943 SP1 TRANSFAC yes 70980537
chr3 50204953 50204968 AR JASPAR yes 2318944
chr3 50204953 50204968 AR JASPAR yes 70980538
chr3 50204956 50204976 TP53 JASPAR yes 2318945
chr3 50204956 50204976 TP53 JASPAR yes 70980539
chr3 50204958 50204978 TP63 JASPAR yes 2318946
chr3 50204958 50204978 TP63 JASPAR yes 70980540
chr3 50204959 50204977 TP53 JASPAR yes 2318947
chr3 50204959 50204977 TP73 JASPAR yes 2318948
chr3 50204959 50204977 TP53 JASPAR yes 70980541
chr3 50204959 50204977 TP73 JASPAR yes 70980542
chr3 50204960 50204975 TP53 JASPAR yes 2318949
chr3 50204960 50204975 TP53 JASPAR yes 70980543
chr3 50204960 50204980 TP53 JASPAR yes 2318950
chr3 50204960 50204980 TP53 JASPAR yes 70980544
chr3 50204961 50204976 TP53 JASPAR yes 2318951
chr3 50204961 50204976 TP53 JASPAR yes 70980545
chr3 50204976 50204988 INSM1 JASPAR yes 2318952
chr3 50204976 50204988 INSM1 JASPAR yes 70980546
chr3 50204980 50204988 SP1 TRANSFAC yes 2318953
chr3 50204980 50204988 SP1 TRANSFAC yes 70980547
chr3 50204980 50204990 SP1 JASPAR yes 2318954
chr3 50204980 50204990 SP1 JASPAR yes 70980548
chr3 50204983 50204995 INSM1 JASPAR yes 2318955
chr3 50204983 50204995 INSM1 JASPAR yes 70980549
chr3 50204983 50204998 NR2C2 JASPAR yes 2318956
chr3 50204983 50204998 NR2C2 JASPAR yes 70980550
chr3 50204986 50204996 SP1 JASPAR yes 2318957
chr3 50204986 50204996 SP1 JASPAR yes 70980551
chr3 50204987 50204997 SP1 JASPAR yes 2318958
chr3 50204987 50204997 SP1 JASPAR yes 70980552
chr3 50204989 50204995 NFE2 TRANSFAC yes 2318959
chr3 50204989 50204995 NFE2 TRANSFAC yes 70980553
chr3 50204989 50205004 HNF4A JASPAR yes 2318960
chr3 50204989 50205004 HNF4A JASPAR yes 70980554
chr3 50204990 50205002 INSM1 JASPAR yes 2318961
chr3 50204990 50205002 INSM1 JASPAR yes 70980555
chr3 50204990 50205004 RXRB JASPAR yes 2318962
chr3 50204990 50205004 RXRB JASPAR yes 70980556
chr3 50204990 50205005 NR2C2 JASPAR yes 2318963
chr3 50204990 50205005 NR2C2 JASPAR yes 70980557
chr3 50204993 50205003 SP1 JASPAR yes 2318964
chr3 50204993 50205003 SP1 JASPAR yes 70980558
chr3 50204994 50205004 SP1 JASPAR yes 2318965
chr3 50204994 50205004 SP1 JASPAR yes 70980559
chr3 50204996 50205002 NFE2 TRANSFAC yes 2318966
chr3 50204996 50205002 NFE2 TRANSFAC yes 70980560
chr3 50204997 50205009 INSM1 JASPAR yes 2318967
chr3 50204997 50205009 TFAP2A JASPAR yes 2318968
chr3 50204997 50205009 INSM1 JASPAR yes 70980561
chr3 50204997 50205009 TFAP2A JASPAR yes 70980562
SNP sites on vista40892[chr3:50204844-50205012]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr3 50204984 rs552462406 AGCCCCCT A
ESR1 INSM1 NR2C2 SP1
6727905
Genes possibly regulated by vista40892[chr3:50204844-50205012]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr3 50126341 50156454 + RBM5 ENSG00000003756.12 50126341 0.7 1.0 3693 21497
chr3 50192478 50226508 + SEMA3F ENSG00000001617.7 50192478 0.81 1.0 3694 87634
chr3 50229045 50233949 + GNAT1 ENSG00000114349.5 50229045 0.89 1.0 3695 75967
chr3 50263724 50296787 + GNAI2 ENSG00000114353.12 50263724 0.7 1.0 3696 41288
Expression level of Genes
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miRNAs possibly regulated by vista40892[chr3:50204844-50205012]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results