EnhancerDB
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  3. vista40893[chr3:50208155-50208394]
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista40893[chr3:50208155-50208394]
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Tissue distribution of vista40893
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Transcription factor that possibly regulate vista40893[chr3:50208155-50208394]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr3 50208244 50208494 FOS UCSC Txn Factor no Conserved 108529165
chr3 50208185 50208189 H4TF2 TRANSFAC yes 2319512
chr3 50208185 50208189 H4TF2 TRANSFAC yes 70980563
chr3 50208190 50208204 PLAG1 JASPAR yes 2319513
chr3 50208190 50208204 PLAG1 JASPAR yes 70980564
chr3 50208192 50208202 SP1 JASPAR yes 2319514
chr3 50208192 50208202 SP1 JASPAR yes 70980565
chr3 50208197 50208203 MZF1 JASPAR yes 2319515
chr3 50208197 50208203 MZF1 JASPAR yes 70980566
chr3 50208211 50208226 ZIC3 JASPAR yes 2319516
chr3 50208211 50208226 ZIC4 JASPAR yes 2319517
chr3 50208211 50208226 ZIC3 JASPAR yes 70980567
chr3 50208211 50208226 ZIC4 JASPAR yes 70980568
chr3 50208212 50208223 EBF1 JASPAR yes 2319518
chr3 50208212 50208223 EBF1 JASPAR yes 70980569
chr3 50208218 50208229 NFKB1 JASPAR yes 2319519
chr3 50208218 50208229 NFKB1 JASPAR yes 70980570
chr3 50208218 50208231 NFKB1 JASPAR yes 2319520
chr3 50208218 50208231 NFKB2 JASPAR yes 2319521
chr3 50208218 50208231 NFKB1 JASPAR yes 70980571
chr3 50208218 50208231 NFKB2 JASPAR yes 70980572
chr3 50208219 50208229 NFKB1 JASPAR yes 2319522
chr3 50208219 50208229 NFKB1 JASPAR yes 70980573
chr3 50208219 50208230 NFKB1 JASPAR yes 2319523
chr3 50208219 50208230 NFKB1 JASPAR yes 70980574
chr3 50208223 50208233 MZF1 JASPAR yes 2319524
chr3 50208223 50208233 MZF1 JASPAR yes 70980575
chr3 50208225 50208235 SP1 JASPAR yes 2319525
chr3 50208225 50208235 SP1 JASPAR yes 70980576
chr3 50208226 50208232 SP1 TRANSFAC yes 2319526
chr3 50208226 50208232 SP1 TRANSFAC yes 70980577
chr3 50208226 50208236 SP1 JASPAR yes 2319527
chr3 50208226 50208236 SP1 JASPAR yes 70980578
chr3 50208226 50208247 ZNF263 JASPAR yes 2319528
chr3 50208226 50208247 ZNF263 JASPAR yes 70980579
chr3 50208227 50208237 SP1 JASPAR yes 2319529
chr3 50208227 50208237 SP1 JASPAR yes 70980580
chr3 50208229 50208239 ZNF740 JASPAR yes 2319530
chr3 50208229 50208239 ZNF740 JASPAR yes 70980581
chr3 50208231 50208241 ZNF740 JASPAR yes 2319531
chr3 50208231 50208241 ZNF740 JASPAR yes 70980582
chr3 50208237 50208256 RFX2 JASPAR yes 2319532
chr3 50208237 50208256 RFX2 JASPAR yes 70980583
chr3 50208241 50208249 FOXO3 JASPAR yes 2319533
chr3 50208241 50208249 FOXO3 JASPAR yes 70980584
chr3 50208241 50208257 RFX2 JASPAR yes 2319534
chr3 50208241 50208257 RFX3 JASPAR yes 2319535
chr3 50208241 50208257 RFX4 JASPAR yes 2319536
chr3 50208241 50208257 RFX5 JASPAR yes 2319537
chr3 50208241 50208257 RFX2 JASPAR yes 70980585
chr3 50208241 50208257 RFX3 JASPAR yes 70980586
chr3 50208241 50208257 RFX4 JASPAR yes 70980587
chr3 50208241 50208257 RFX5 JASPAR yes 70980588
chr3 50208242 50208261 RFX2 JASPAR yes 2319538
chr3 50208242 50208261 RFX2 JASPAR yes 70980589
chr3 50208256 50208274 NR3C1 JASPAR yes 2319539
chr3 50208256 50208274 NR3C1 JASPAR yes 70980590
chr3 50208288 50208296 CREB1 JASPAR yes 2319540
chr3 50208288 50208296 CREB1 JASPAR yes 70980591
chr3 50208296 50208301 GATA2 JASPAR yes 2319541
chr3 50208296 50208301 GATA2 JASPAR yes 70980592
chr3 50208309 50208319 SP1 JASPAR yes 2319542
chr3 50208309 50208319 SP1 JASPAR yes 70980593
chr3 50208311 50208317 MAZ TRANSFAC yes 2319543
chr3 50208311 50208317 MAZ TRANSFAC yes 70980594
chr3 50208317 50208321 H4TF2 TRANSFAC yes 2319544
chr3 50208317 50208321 H4TF2 TRANSFAC yes 70980595
chr3 50208325 50208339 JUN JASPAR yes 2319545
chr3 50208325 50208339 JUN JASPAR yes 70980596
chr3 50208326 50208330 H4TF2 TRANSFAC yes 2319546
chr3 50208326 50208330 H4TF2 TRANSFAC yes 70980597
chr3 50208329 50208340 FOS JASPAR yes 2319547
chr3 50208329 50208340 FOSL1 JASPAR yes 2319548
chr3 50208329 50208340 JUND JASPAR yes 2319549
chr3 50208329 50208340 NFE2 JASPAR yes 2319550
chr3 50208329 50208340 FOS JASPAR yes 70980598
chr3 50208329 50208340 FOSL1 JASPAR yes 70980599
chr3 50208329 50208340 JUND JASPAR yes 70980600
chr3 50208329 50208340 NFE2 JASPAR yes 70980601
chr3 50208330 50208339 JDP2 JASPAR yes 2319551
chr3 50208330 50208339 JDP2 JASPAR yes 70980602
chr3 50208330 50208341 FOSL2 JASPAR yes 2319552
chr3 50208330 50208341 JUNB JASPAR yes 2319553
chr3 50208330 50208341 FOSL2 JASPAR yes 70980603
chr3 50208330 50208341 JUNB JASPAR yes 70980604
chr3 50208330 50208344 JUN JASPAR yes 2319554
chr3 50208330 50208344 JUN JASPAR yes 70980605
chr3 50208333 50208344 USF1 JASPAR yes 2319555
chr3 50208333 50208344 USF1 JASPAR yes 70980606
chr3 50208334 50208344 TFEB JASPAR yes 2319556
chr3 50208334 50208344 TFEC JASPAR yes 2319557
chr3 50208334 50208344 TFEB JASPAR yes 70980607
chr3 50208334 50208344 TFEC JASPAR yes 70980608
chr3 50208334 50208345 USF2 JASPAR yes 2319558
chr3 50208334 50208345 USF2 JASPAR yes 70980609
chr3 50208344 50208348 NFE TRANSFAC yes 2319559
chr3 50208344 50208348 NFE TRANSFAC yes 70980610
chr3 50208350 50208370 PPARG JASPAR yes 2319560
chr3 50208350 50208370 PPARG JASPAR yes 70980611
chr3 50208359 50208377 RARA JASPAR yes 2319561
chr3 50208359 50208377 RARA JASPAR yes 70980612
chr3 50208364 50208374 GABPA JASPAR yes 2319562
chr3 50208364 50208374 GABPA JASPAR yes 70980613
chr3 50208366 50208372 ETS1 JASPAR yes 2319563
chr3 50208366 50208372 SPI1 JASPAR yes 2319564
chr3 50208366 50208372 ETS1 JASPAR yes 70980614
chr3 50208366 50208372 SPI1 JASPAR yes 70980615
chr3 50208366 50208376 ELK1 JASPAR yes 2319565
chr3 50208366 50208376 ELK1 JASPAR yes 70980616
chr3 50208377 50208390 TFAP2A JASPAR yes 2319566
chr3 50208377 50208390 TFAP2A JASPAR yes 70980617
SNP sites on vista40893[chr3:50208155-50208394]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
Genes possibly regulated by vista40893[chr3:50208155-50208394]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr3 50126341 50156454 + RBM5 ENSG00000003756.12 50126341 0.7 1.0 3693 18186
chr3 50192478 50226508 + SEMA3F ENSG00000001617.7 50192478 0.81 1.0 3694 84323
chr3 50229045 50233949 + GNAT1 ENSG00000114349.5 50229045 0.89 1.0 3695 79349
chr3 50263724 50296787 + GNAI2 ENSG00000114353.12 50263724 0.7 1.0 3696 44670
Expression level of Genes
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miRNAs possibly regulated by vista40893[chr3:50208155-50208394]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results