EnhancerDB
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  3. vista40895[chr3:50243484-50243685]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista40895[chr3:50243484-50243685]
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Tissue distribution of vista40895
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Transcription factor that possibly regulate vista40895[chr3:50243484-50243685]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr3 50243214 50243678 POLR2A UCSC Txn Factor no Conserved 108529168
chr3 50243462 50243718 FOXA1 UCSC Txn Factor no Conserved 108529169
chr3 50243486 50243497 NRF1 JASPAR yes 70980646
chr3 50243512 50243517 ETS2 TRANSFAC yes 70980647
chr3 50243537 50243547 SP1 JASPAR yes 70980648
chr3 50243538 50243545 SP1 TRANSFAC yes 70980649
chr3 50243538 50243548 SP1 JASPAR yes 70980650
chr3 50243539 50243546 SP1 TRANSFAC yes 70980651
chr3 50243540 50243545 SP1 TRANSFAC yes 70980652
chr3 50243540 50243546 SP1 TRANSFAC yes 70980653
chr3 50243540 50243547 SP1 TRANSFAC yes 70980654
chr3 50243541 50243549 WT1 TRANSFAC yes 70980655
chr3 50243544 50243550 SP1 TRANSFAC yes 70980656
chr3 50243546 50243551 SP1 TRANSFAC yes 70980657
chr3 50243560 50243576 NFYA JASPAR yes 70980658
chr3 50243563 50243578 NFYB JASPAR yes 70980659
chr3 50243565 50243570 NFY TRANSFAC yes 70980660
chr3 50243588 50243603 FOXP1 JASPAR yes 70980661
chr3 50243589 50243598 SRY JASPAR yes 70980662
chr3 50243589 50243600 FOXP2 JASPAR yes 70980663
chr3 50243590 50243598 FOXD1 JASPAR yes 70980664
chr3 50243590 50243598 FOXG1 JASPAR yes 70980665
chr3 50243590 50243598 FOXO3 JASPAR yes 70980666
chr3 50243591 50243598 FOXD2 JASPAR yes 70980667
chr3 50243591 50243598 FOXI1 JASPAR yes 70980668
chr3 50243591 50243598 FOXL1 JASPAR yes 70980669
chr3 50243591 50243598 FOXO4 JASPAR yes 70980670
chr3 50243591 50243598 FOXO6 JASPAR yes 70980671
chr3 50243591 50243598 FOXP3 JASPAR yes 70980672
chr3 50243591 50243599 FOXO3 JASPAR yes 70980673
chr3 50243602 50243614 INSM1 JASPAR yes 70980674
chr3 50243607 50243628 ZNF263 JASPAR yes 70980675
chr3 50243619 50243625 MAZ TRANSFAC yes 70980676
chr3 50243638 50243643 SP1 TRANSFAC yes 70980677
chr3 50243639 50243654 NR2C2 JASPAR yes 70980678
chr3 50243646 50243656 ZNF740 JASPAR yes 70980679
chr3 50243648 50243661 TFAP2A JASPAR yes 70980680
chr3 50243648 50243661 TFAP2B JASPAR yes 70980681
chr3 50243648 50243661 TFAP2C JASPAR yes 70980682
chr3 50243676 50243685 ZEB1 JASPAR yes 70980683
SNP sites on vista40895[chr3:50243484-50243685]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr3 50243510 rs2236939 G T
FOXA1 POLR2A
6728096
Genes possibly regulated by vista40895[chr3:50243484-50243685]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr3 50192478 50226508 + SEMA3F ENSG00000001617.7 50192478 0.81 1.0 3694 48994
chr3 50229045 50233949 + GNAT1 ENSG00000114349.5 50229045 0.89 1.0 3695 85561
chr3 50263724 50296787 + GNAI2 ENSG00000114353.12 50263724 0.7 1.0 3696 79961
chr3 50316458 50325545 + LSMEM2 ENSG00000179564.3 50316458 0.97 1.0 3697 27227
chr3 50325163 50330349 - IFRD2 ENSG00000214706.6 50330349 0.69 1.0 3698 13336
chr3 50330262 50336899 - HYAL3 ENSG00000186792.11 50336899 0.77 0.99 3699 6786
chr3 50333833 50336852 - NAT6 ENSG00000243477.1 50336852 0.59 1.0 3700 6833
Expression level of Genes
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miRNAs possibly regulated by vista40895[chr3:50243484-50243685]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results