EnhancerDB
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  3. vista4090[chr1:181046810-181047186]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista4090[chr1:181046810-181047186]
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Tissue distribution of vista4090
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Transcription factor that possibly regulate vista4090[chr1:181046810-181047186]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 181046819 181046822 MYB TRANSFAC yes 33550762
chr1 181046819 181046822 MYB TRANSFAC yes 118407522
chr1 181046859 181046877 SRF JASPAR yes 33550763
chr1 181046859 181046877 SRF JASPAR yes 118407523
chr1 181046861 181046877 SRF JASPAR yes 33550764
chr1 181046861 181046877 SRF JASPAR yes 118407524
chr1 181046861 181046879 SRF JASPAR yes 33550765
chr1 181046861 181046879 SRF JASPAR yes 118407525
chr1 181046862 181046874 SRF JASPAR yes 33550766
chr1 181046862 181046874 SRF JASPAR yes 118407526
chr1 181046864 181046876 SRF JASPAR yes 33550767
chr1 181046864 181046876 SRF JASPAR yes 118407527
chr1 181046869 181046879 GCM2 JASPAR yes 33550768
chr1 181046869 181046879 GCM2 JASPAR yes 118407528
chr1 181046870 181046890 PPARG JASPAR yes 33550769
chr1 181046870 181046890 PPARG JASPAR yes 118407529
chr1 181046874 181046878 LFA1 TRANSFAC yes 33550770
chr1 181046874 181046878 LFA1 TRANSFAC yes 118407530
chr1 181046906 181046920 JUN JASPAR yes 33550771
chr1 181046906 181046920 JUN JASPAR yes 118407531
chr1 181046908 181046919 BATF JASPAR yes 33550772
chr1 181046908 181046919 BATF JASPAR yes 118407532
chr1 181046910 181046921 FOS JASPAR yes 33550773
chr1 181046910 181046921 FOSL1 JASPAR yes 33550774
chr1 181046910 181046921 JUND JASPAR yes 33550775
chr1 181046910 181046921 FOS JASPAR yes 118407533
chr1 181046910 181046921 FOSL1 JASPAR yes 118407534
chr1 181046910 181046921 JUND JASPAR yes 118407535
chr1 181046911 181046922 FOSL2 JASPAR yes 33550776
chr1 181046911 181046922 JUNB JASPAR yes 33550777
chr1 181046911 181046922 FOSL2 JASPAR yes 118407536
chr1 181046911 181046922 JUNB JASPAR yes 118407537
chr1 181046911 181046925 JUN JASPAR yes 33550778
chr1 181046911 181046925 JUN JASPAR yes 118407538
chr1 181046944 181046949 H4TF1 TRANSFAC yes 33550779
chr1 181046944 181046949 H4TF1 TRANSFAC yes 118407539
chr1 181046959 181046973 BATF3 JASPAR yes 33550780
chr1 181046959 181046973 BATF3 JASPAR yes 118407540
chr1 181046971 181046985 STAT1 JASPAR yes 33550781
chr1 181046971 181046985 STAT1 JASPAR yes 118407541
chr1 181046971 181046986 STAT2 JASPAR yes 33550782
chr1 181046971 181046986 STAT2 JASPAR yes 118407542
chr1 181046996 181047006 TFEB JASPAR yes 33550783
chr1 181046996 181047006 TFEC JASPAR yes 33550784
chr1 181046996 181047006 TFEB JASPAR yes 118407543
chr1 181046996 181047006 TFEC JASPAR yes 118407544
chr1 181047009 181047027 NR3C1 JASPAR yes 33550785
chr1 181047009 181047027 NR3C1 JASPAR yes 118407545
chr1 181047021 181047025 YY1 TRANSFAC yes 33550786
chr1 181047021 181047025 YY1 TRANSFAC yes 118407546
chr1 181047028 181047043 AR JASPAR yes 33550787
chr1 181047028 181047043 AR JASPAR yes 118407547
chr1 181047028 181047045 NR3C1 JASPAR yes 33550788
chr1 181047028 181047045 NR3C2 JASPAR yes 33550789
chr1 181047028 181047045 NR3C1 JASPAR yes 118407548
chr1 181047028 181047045 NR3C2 JASPAR yes 118407549
chr1 181047030 181047050 TP63 JASPAR yes 33550790
chr1 181047030 181047050 TP63 JASPAR yes 118407550
chr1 181047032 181047042 MSC JASPAR yes 33550791
chr1 181047032 181047042 MSC JASPAR yes 118407551
chr1 181047037 181047048 FLI1 JASPAR yes 33550792
chr1 181047037 181047048 FLI1 JASPAR yes 118407552
chr1 181047037 181047051 STAT1 JASPAR yes 33550793
chr1 181047037 181047051 STAT1 JASPAR yes 118407553
chr1 181047038 181047048 ETS1 JASPAR yes 33550794
chr1 181047038 181047048 ETS1 JASPAR yes 118407554
chr1 181047038 181047049 ETV2 JASPAR yes 33550795
chr1 181047038 181047049 ETV2 JASPAR yes 118407555
chr1 181047044 181047048 NFE TRANSFAC yes 33550796
chr1 181047044 181047048 NFE TRANSFAC yes 118407556
chr1 181047065 181047069 YY1 TRANSFAC yes 33550797
chr1 181047065 181047069 YY1 TRANSFAC yes 118407557
chr1 181047074 181047084 FIGLA JASPAR yes 33550798
chr1 181047074 181047084 FIGLA JASPAR yes 118407558
chr1 181047096 181047111 MEF2C JASPAR yes 33550799
chr1 181047096 181047111 MEF2C JASPAR yes 118407559
chr1 181047098 181047111 DUXA JASPAR yes 33550800
chr1 181047098 181047111 DUXA JASPAR yes 118407560
chr1 181047102 181047111 PITX3 JASPAR yes 33550801
chr1 181047102 181047111 PITX3 JASPAR yes 118407561
chr1 181047102 181047112 GSC2 JASPAR yes 33550802
chr1 181047102 181047112 GSC JASPAR yes 33550803
chr1 181047102 181047112 GSC2 JASPAR yes 118407562
chr1 181047102 181047112 GSC JASPAR yes 118407563
chr1 181047103 181047111 OTX1 JASPAR yes 33550804
chr1 181047103 181047111 OTX2 JASPAR yes 33550805
chr1 181047103 181047111 RHOXF1 JASPAR yes 33550806
chr1 181047103 181047111 OTX1 JASPAR yes 118407564
chr1 181047103 181047111 OTX2 JASPAR yes 118407565
chr1 181047103 181047111 RHOXF1 JASPAR yes 118407566
chr1 181047105 181047119 EBF1 JASPAR yes 33550807
chr1 181047105 181047119 EBF1 JASPAR yes 118407567
chr1 181047106 181047117 EBF1 JASPAR yes 33550808
chr1 181047106 181047117 EBF1 JASPAR yes 118407568
chr1 181047112 181047122 RELA JASPAR yes 33550809
chr1 181047112 181047122 RELA JASPAR yes 118407569
chr1 181047112 181047123 NFKB1 JASPAR yes 33550810
chr1 181047112 181047123 NFKB1 JASPAR yes 118407570
chr1 181047117 181047127 MZF1 JASPAR yes 33550811
chr1 181047117 181047127 MZF1 JASPAR yes 118407571
chr1 181047155 181047162 TBP TRANSFAC yes 33550812
chr1 181047155 181047162 TFIID TRANSFAC yes 33550813
chr1 181047155 181047162 TBP TRANSFAC yes 118407572
chr1 181047155 181047162 TFIID TRANSFAC yes 118407573
chr1 181047165 181047169 LFA1 TRANSFAC yes 33550814
chr1 181047165 181047169 LFA1 TRANSFAC yes 118407574
chr1 181047184 181047197 TFAP2A JASPAR yes 33550815
chr1 181047184 181047197 TFAP2B JASPAR yes 33550816
chr1 181047184 181047197 TFAP2C JASPAR yes 33550817
chr1 181047184 181047197 TFAP2A JASPAR yes 118407575
chr1 181047184 181047197 TFAP2B JASPAR yes 118407576
chr1 181047184 181047197 TFAP2C JASPAR yes 118407577
chr1 181047185 181047199 PLAG1 JASPAR yes 33550818
chr1 181047185 181047199 PLAG1 JASPAR yes 118407578
SNP sites on vista4090[chr1:181046810-181047186]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 181046911 rs2332058 T C
BATF FOS FOSL1 FOSL2 JUN JUNB JUND
767308
chr1 181047076 rs116446853 C T
FIGLA
767309
chr1 181047166 rs528896811 G A
LFA1
767310
Genes possibly regulated by vista4090[chr1:181046810-181047186]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 180941861 180992047 - STX6 ENSG00000135823.9 180992047 0.72 0.99 1623 45237
chr1 181003067 181031074 + MR1 ENSG00000153029.10 181003067 0.72 0.99 1624 56257
chr1 181057638 181059977 + IER5 ENSG00000162783.8 181057638 0.82 1.0 1625 89548
Expression level of Genes
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miRNAs possibly regulated by vista4090[chr1:181046810-181047186]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results