EnhancerDB
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  3. vista40909[chr3:50484818-50485110]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista40909[chr3:50484818-50485110]
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Tissue distribution of vista40909
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Transcription factor that possibly regulate vista40909[chr3:50484818-50485110]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr3 50484815 50484826 FLI1 JASPAR yes 2332059
chr3 50484815 50484826 FLI1 JASPAR yes 70981448
chr3 50484816 50484824 EHF JASPAR yes 2332060
chr3 50484816 50484824 EHF JASPAR yes 70981449
chr3 50484821 50484832 E2F6 JASPAR yes 2332061
chr3 50484821 50484832 E2F6 JASPAR yes 70981450
chr3 50484845 50484853 MEIS2 JASPAR yes 2332062
chr3 50484845 50484853 MEIS2 JASPAR yes 70981451
chr3 50484846 50484850 NFE TRANSFAC yes 2332063
chr3 50484846 50484850 NFE TRANSFAC yes 70981452
chr3 50484846 50484853 MEIS1 JASPAR yes 2332064
chr3 50484846 50484853 MEIS1 JASPAR yes 70981453
chr3 50484861 50484882 ZNF263 JASPAR yes 2332065
chr3 50484861 50484882 ZNF263 JASPAR yes 70981454
chr3 50484869 50484887 RARA JASPAR yes 2332066
chr3 50484869 50484887 RARA JASPAR yes 70981455
chr3 50484870 50484875 SP1 TRANSFAC yes 2332067
chr3 50484870 50484875 SP1 TRANSFAC yes 70981456
chr3 50484876 50484885 THAP1 JASPAR yes 2332068
chr3 50484876 50484885 THAP1 JASPAR yes 70981457
chr3 50484879 50484883 LFA1 TRANSFAC yes 2332069
chr3 50484879 50484883 LFA1 TRANSFAC yes 70981458
chr3 50484880 50484895 JUND JASPAR yes 2332070
chr3 50484880 50484895 JUND JASPAR yes 70981459
chr3 50484885 50484893 CREB1 JASPAR yes 2332071
chr3 50484885 50484893 CREB1 JASPAR yes 70981460
chr3 50484905 50484920 AR JASPAR yes 2332072
chr3 50484905 50484920 AR JASPAR yes 70981461
chr3 50484905 50484922 NR3C2 JASPAR yes 2332073
chr3 50484905 50484922 NR3C2 JASPAR yes 70981462
chr3 50484920 50484931 NFIL3 JASPAR yes 2332074
chr3 50484920 50484931 NFIL3 JASPAR yes 70981463
chr3 50484921 50484933 DBP JASPAR yes 2332075
chr3 50484921 50484933 HLF JASPAR yes 2332076
chr3 50484921 50484933 TEF JASPAR yes 2332077
chr3 50484921 50484933 DBP JASPAR yes 70981464
chr3 50484921 50484933 HLF JASPAR yes 70981465
chr3 50484921 50484933 TEF JASPAR yes 70981466
chr3 50484923 50484934 NFIL3 JASPAR yes 2332078
chr3 50484923 50484934 NFIL3 JASPAR yes 70981467
chr3 50484938 50484949 FLI1 JASPAR yes 2332079
chr3 50484938 50484949 FLI1 JASPAR yes 70981468
chr3 50484938 50484951 ELF3 JASPAR yes 2332080
chr3 50484938 50484951 ELF3 JASPAR yes 70981469
chr3 50484939 50484949 ETV6 JASPAR yes 2332081
chr3 50484939 50484949 ETV6 JASPAR yes 70981470
chr3 50484939 50484950 ELF5 JASPAR yes 2332082
chr3 50484939 50484950 ELF5 JASPAR yes 70981471
chr3 50484939 50484951 EHF JASPAR yes 2332083
chr3 50484939 50484951 ELF4 JASPAR yes 2332084
chr3 50484939 50484951 EHF JASPAR yes 70981472
chr3 50484939 50484951 ELF4 JASPAR yes 70981473
chr3 50484939 50484952 ELF1 JASPAR yes 2332085
chr3 50484939 50484952 ELF1 JASPAR yes 70981474
chr3 50484939 50484953 SPI1 JASPAR yes 2332086
chr3 50484939 50484953 SPI1 JASPAR yes 70981475
chr3 50484940 50484947 SPI1 JASPAR yes 2332087
chr3 50484940 50484947 SPI1 JASPAR yes 70981476
chr3 50484940 50484948 EHF JASPAR yes 2332088
chr3 50484940 50484948 EHF JASPAR yes 70981477
chr3 50484951 50484962 E2F6 JASPAR yes 2332089
chr3 50484951 50484962 E2F6 JASPAR yes 70981478
chr3 50484966 50484980 NR2F1 JASPAR yes 2332090
chr3 50484966 50484980 NR2F1 JASPAR yes 70981479
chr3 50484977 50484992 NR2C2 JASPAR yes 2332091
chr3 50484977 50484992 NR2C2 JASPAR yes 70981480
chr3 50484978 50484999 ZNF263 JASPAR yes 2332092
chr3 50484978 50484999 ZNF263 JASPAR yes 70981481
chr3 50484980 50484990 SP1 JASPAR yes 2332093
chr3 50484980 50484990 SP1 JASPAR yes 70981482
chr3 50484983 50484989 NFE2 TRANSFAC yes 2332094
chr3 50484983 50484989 NFE2 TRANSFAC yes 70981483
chr3 50485048 50485053 SP1 TRANSFAC yes 2332095
chr3 50485048 50485053 SP1 TRANSFAC yes 70981484
chr3 50485048 50485054 SP1 TRANSFAC yes 2332096
chr3 50485048 50485054 SP1 TRANSFAC yes 70981485
chr3 50485049 50485060 EBF1 JASPAR yes 2332097
chr3 50485049 50485060 EBF1 JASPAR yes 70981486
chr3 50485049 50485062 TFAP2A JASPAR yes 2332098
chr3 50485049 50485062 TFAP2B JASPAR yes 2332099
chr3 50485049 50485062 TFAP2C JASPAR yes 2332100
chr3 50485049 50485062 TFAP2A JASPAR yes 70981487
chr3 50485049 50485062 TFAP2B JASPAR yes 70981488
chr3 50485049 50485062 TFAP2C JASPAR yes 70981489
chr3 50485050 50485065 TFAP2C JASPAR yes 2332101
chr3 50485050 50485065 TFAP2C JASPAR yes 70981490
chr3 50485051 50485062 EBF1 JASPAR yes 2332102
chr3 50485051 50485062 EBF1 JASPAR yes 70981491
chr3 50485052 50485061 TFAP2A JASPAR yes 2332103
chr3 50485052 50485061 TFAP2A JASPAR yes 70981492
chr3 50485056 50485061 SP1 TRANSFAC yes 2332104
chr3 50485056 50485061 SP1 TRANSFAC yes 70981493
chr3 50485056 50485075 PAX5 JASPAR yes 2332105
chr3 50485056 50485075 PAX5 JASPAR yes 70981494
chr3 50485058 50485071 TFAP2B JASPAR yes 2332106
chr3 50485058 50485071 TFAP2C JASPAR yes 2332107
chr3 50485058 50485071 TFAP2B JASPAR yes 70981495
chr3 50485058 50485071 TFAP2C JASPAR yes 70981496
chr3 50485077 50485081 LFA1 TRANSFAC yes 2332108
chr3 50485077 50485081 LFA1 TRANSFAC yes 70981497
chr3 50485083 50485093 SREBF1 JASPAR yes 2332109
chr3 50485083 50485093 SREBF1 JASPAR yes 70981498
chr3 50485095 50485099 H4TF2 TRANSFAC yes 2332110
chr3 50485095 50485099 H4TF2 TRANSFAC yes 70981499
chr3 50485100 50485111 NFE2L2 JASPAR yes 2332111
chr3 50485100 50485111 NFE2L2 JASPAR yes 70981500
SNP sites on vista40909[chr3:50484818-50485110]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr3 50484907 rs77680767 G A,C
AR NR3C2
6729107
chr3 50484958 rs147312416 G T
E2F6
6729108
chr3 50485003 rs372673019 T C no 6729109
chr3 50485005 rs71326932 C T no 6729110
chr3 50485051 rs530069760 G A
EBF1 SP1 TFAP2A TFAP2B TFAP2C
6729111
chr3 50485065 rs73833385 C A
PAX5 TFAP2B TFAP2C
6729112
chr3 50485071 rs191916052 G A
PAX5 TFAP2B TFAP2C
6729113
Genes possibly regulated by vista40909[chr3:50484818-50485110]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr3 50384761 50388522 - NPRL2 ENSG00000114388.8 50388522 0.63 1.0 3706 3704
chr3 50388126 50395891 + CYB561D2 ENSG00000114395.6 50388126 0.63 1.0 3707 3308
chr3 50388323 50405354 + XXcos-LUCA11.5 ENSG00000272104.1 50388323 0.93 0.9 3708 3505
chr3 50392180 50397041 - TMEM115 ENSG00000126062.3 50397041 0.63 1.0 3709 12223
chr3 50400233 50541675 - CACNA2D2 ENSG00000007402.7 50541675 0.95 1.0 3710 43435
Expression level of Genes
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miRNAs possibly regulated by vista40909[chr3:50484818-50485110]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results