EnhancerDB
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  3. vista40911[chr3:50488140-50488331]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista40911[chr3:50488140-50488331]
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Tissue distribution of vista40911
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Transcription factor that possibly regulate vista40911[chr3:50488140-50488331]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr3 50488169 50488180 FOS JASPAR yes 2332431
chr3 50488169 50488180 FOSL1 JASPAR yes 2332432
chr3 50488169 50488180 JUND JASPAR yes 2332433
chr3 50488169 50488180 FOS JASPAR yes 70981555
chr3 50488169 50488180 FOSL1 JASPAR yes 70981556
chr3 50488169 50488180 JUND JASPAR yes 70981557
chr3 50488170 50488184 JUN JASPAR yes 2332434
chr3 50488170 50488184 JUN JASPAR yes 70981558
chr3 50488171 50488182 BATF JASPAR yes 2332435
chr3 50488171 50488182 BATF JASPAR yes 70981559
chr3 50488205 50488211 SP1 TRANSFAC yes 2332436
chr3 50488205 50488211 SP1 TRANSFAC yes 70981560
chr3 50488210 50488220 SP1 JASPAR yes 2332437
chr3 50488210 50488220 SP1 JASPAR yes 70981561
chr3 50488212 50488221 THAP1 JASPAR yes 2332438
chr3 50488212 50488221 THAP1 JASPAR yes 70981562
chr3 50488212 50488227 RUNX2 JASPAR yes 2332439
chr3 50488212 50488227 RUNX2 JASPAR yes 70981563
chr3 50488233 50488249 GLIS1 JASPAR yes 2332440
chr3 50488233 50488249 GLIS1 JASPAR yes 70981564
chr3 50488235 50488240 SP1 TRANSFAC yes 2332441
chr3 50488235 50488240 SP1 TRANSFAC yes 70981565
chr3 50488245 50488250 ATF1 TRANSFAC yes 2332442
chr3 50488245 50488250 ATF1 TRANSFAC yes 70981566
chr3 50488247 50488266 PAX5 JASPAR yes 2332443
chr3 50488247 50488266 PAX5 JASPAR yes 70981567
chr3 50488248 50488256 MGA JASPAR yes 2332444
chr3 50488248 50488256 TBX15 JASPAR yes 2332445
chr3 50488248 50488256 TBX1 JASPAR yes 2332446
chr3 50488248 50488256 TBX4 JASPAR yes 2332447
chr3 50488248 50488256 TBX5 JASPAR yes 2332448
chr3 50488248 50488256 MGA JASPAR yes 70981568
chr3 50488248 50488256 TBX15 JASPAR yes 70981569
chr3 50488248 50488256 TBX1 JASPAR yes 70981570
chr3 50488248 50488256 TBX4 JASPAR yes 70981571
chr3 50488248 50488256 TBX5 JASPAR yes 70981572
chr3 50488253 50488273 RREB1 JASPAR yes 2332449
chr3 50488253 50488273 RREB1 JASPAR yes 70981573
chr3 50488273 50488285 TGIF1 JASPAR yes 2332450
chr3 50488273 50488285 TGIF2 JASPAR yes 2332451
chr3 50488273 50488285 TGIF1 JASPAR yes 70981574
chr3 50488273 50488285 TGIF2 JASPAR yes 70981575
chr3 50488317 50488331 TLX1 JASPAR yes 2332452
chr3 50488317 50488331 TLX1 JASPAR yes 70981576
SNP sites on vista40911[chr3:50488140-50488331]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr3 50488272 rs371415616 A G
RREB1
6729141
chr3 50488278 rs79183523 C T
TGIF1 TGIF2
6729142
Genes possibly regulated by vista40911[chr3:50488140-50488331]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr3 50384761 50388522 - NPRL2 ENSG00000114388.8 50388522 0.63 1.0 3706 382
chr3 50388323 50405354 + XXcos-LUCA11.5 ENSG00000272104.1 50388323 0.93 0.9 3708 183
chr3 50392180 50397041 - TMEM115 ENSG00000126062.3 50397041 0.63 1.0 3709 8901
chr3 50400233 50541675 - CACNA2D2 ENSG00000007402.7 50541675 0.95 1.0 3710 46656
Expression level of Genes
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miRNAs possibly regulated by vista40911[chr3:50488140-50488331]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results