EnhancerDB
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  3. vista40924[chr3:50643029-50643593]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista40924[chr3:50643029-50643593]
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Tissue distribution of vista40924
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Transcription factor that possibly regulate vista40924[chr3:50643029-50643593]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr3 50642399 50643037 E2F1 UCSC Txn Factor no Conserved 108529205
chr3 50642399 50643037 E2F1 UCSC Txn Factor no Conserved 108529206
chr3 50643033 50643043 GBX2 JASPAR yes 70982142
chr3 50643033 50643043 HOXB3 JASPAR yes 70982143
chr3 50643033 50643043 MNX1 JASPAR yes 70982144
chr3 50643034 50643042 BARX1 JASPAR yes 70982145
chr3 50643034 50643042 EN1 JASPAR yes 70982146
chr3 50643034 50643042 ISL2 JASPAR yes 70982147
chr3 50643034 50643042 MSX1 JASPAR yes 70982148
chr3 50643034 50643042 MSX2 JASPAR yes 70982149
chr3 50643034 50643042 PDX1 JASPAR yes 70982150
chr3 50643034 50643043 VENTX JASPAR yes 70982151
chr3 50643036 50643051 TFAP2A JASPAR yes 70982152
chr3 50643036 50643051 TFAP2C JASPAR yes 70982153
chr3 50643037 50643049 PBX1 JASPAR yes 70982154
chr3 50643057 50643067 GABPA JASPAR yes 70982155
chr3 50643058 50643066 EHF JASPAR yes 70982156
chr3 50643071 50643080 SRY JASPAR yes 70982157
chr3 50643073 50643081 FOXO3 JASPAR yes 70982158
chr3 50643118 50643123 SP1 TRANSFAC yes 70982159
chr3 50643120 50643135 TFAP2A JASPAR yes 70982160
chr3 50643120 50643135 TFAP2C JASPAR yes 70982161
chr3 50643122 50643134 PBX1 JASPAR yes 70982162
chr3 50643138 50643144 ETS1 JASPAR yes 70982163
chr3 50643151 50643164 ELF1 JASPAR yes 70982164
chr3 50643154 50643164 GABPA JASPAR yes 70982165
chr3 50643170 50643176 GATA3 JASPAR yes 70982166
chr3 50643178 50643198 ESR1 JASPAR yes 70982167
chr3 50643182 50643200 NR3C1 JASPAR yes 70982168
chr3 50643183 50643198 ESR2 JASPAR yes 70982169
chr3 50643183 50643203 ESR1 JASPAR yes 70982170
chr3 50643191 50643195 NFE TRANSFAC yes 70982171
chr3 50643207 50643218 FOXP2 JASPAR yes 70982172
chr3 50643209 50643217 FOXO3 JASPAR yes 70982173
chr3 50643209 50643220 FOXA1 JASPAR yes 70982174
chr3 50643213 50643228 SOX21 JASPAR yes 70982175
chr3 50643216 50643221 MYB TRANSFAC yes 70982176
chr3 50643261 50643276 LEF1 JASPAR yes 70982177
chr3 50643275 50643295 RREB1 JASPAR yes 70982178
chr3 50643278 50643282 H1TF2 TRANSFAC yes 70982179
chr3 50643278 50643282 NFE TRANSFAC yes 70982180
chr3 50643278 50643282 SRF TRANSFAC yes 70982181
chr3 50643285 50643305 TP63 JASPAR yes 70982182
chr3 50643313 50643328 TFAP2A JASPAR yes 70982183
chr3 50643315 50643320 SP1 TRANSFAC yes 70982184
chr3 50643315 50643321 SP1 TRANSFAC yes 70982185
chr3 50643319 50643330 ESRRA JASPAR yes 70982186
chr3 50643323 50643327 ESR1 TRANSFAC yes 70982187
chr3 50643344 50643358 NR2F1 JASPAR yes 70982188
chr3 50643366 50643375 SP1 TRANSFAC yes 70982189
chr3 50643366 50643385 PAX5 JASPAR yes 70982190
chr3 50643369 50643375 NFE2 TRANSFAC yes 70982191
chr3 50643414 50643424 MAX JASPAR yes 70982192
chr3 50643414 50643426 HES5 JASPAR yes 70982193
chr3 50643414 50643426 HES7 JASPAR yes 70982194
chr3 50643415 50643425 BHLHE40 JASPAR yes 70982195
chr3 50643415 50643425 BHLHE41 JASPAR yes 70982196
chr3 50643415 50643425 CLOCK JASPAR yes 70982197
chr3 50643415 50643425 HEY1 JASPAR yes 70982198
chr3 50643415 50643425 HEY2 JASPAR yes 70982199
chr3 50643415 50643425 MAX JASPAR yes 70982200
chr3 50643415 50643425 MLXIPL JASPAR yes 70982201
chr3 50643415 50643425 MLX JASPAR yes 70982202
chr3 50643415 50643425 MNT JASPAR yes 70982203
chr3 50643415 50643425 TFE3 JASPAR yes 70982204
chr3 50643415 50643425 TFEB JASPAR yes 70982205
chr3 50643415 50643425 TFEC JASPAR yes 70982206
chr3 50643416 50643426 MAX JASPAR yes 70982207
chr3 50643417 50643422 MYC TRANSFAC yes 70982208
chr3 50643417 50643422 USF1 TRANSFAC yes 70982209
chr3 50643417 50643422 USF2 TRANSFAC yes 70982210
chr3 50643429 50643446 PAX1 JASPAR yes 70982211
chr3 50643429 50643446 PAX9 JASPAR yes 70982212
chr3 50643430 50643449 PAX5 JASPAR yes 70982213
chr3 50643449 50643464 AR JASPAR yes 70982214
chr3 50643503 50643516 JUN JASPAR yes 70982215
chr3 50643581 50643590 HIC2 JASPAR yes 70982216
chr3 50643581 50643591 NFIA JASPAR yes 70982217
chr3 50643583 50643589 NFIC JASPAR yes 70982218
chr3 50643587 50643591 YY1 TRANSFAC yes 70982219
SNP sites on vista40924[chr3:50643029-50643593]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr3 50643136 rs563611003 G A no 6729871
chr3 50643140 rs13318236 G A
ETS1
6729872
chr3 50643198 rs9832171 G A
ESR1 ESR2 NR3C1
6729873
chr3 50643305 rs201193 C T
TP63
6729874
chr3 50643313 rs181289206 C T
TFAP2A
6729875
chr3 50643381 rs557895913 C T
PAX5
6729876
Genes possibly regulated by vista40924[chr3:50643029-50643593]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr3 50595462 50608458 - C3orf18 ENSG00000088543.10 50608458 0.65 1.0 3711 65429
chr3 50606583 50622366 + HEMK1 ENSG00000114735.5 50606583 0.7 1.0 3712 63554
chr3 50643921 50649262 - CISH ENSG00000114737.11 50649262 0.76 0.99 3713 94331
chr3 50648951 50686720 + MAPKAPK3 ENSG00000114738.6 50648951 0.81 1.0 3714 94642
chr3 50712672 51421629 + DOCK3 ENSG00000088538.12 50712672 0.96 1.0 3715 30921
Expression level of Genes
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miRNAs possibly regulated by vista40924[chr3:50643029-50643593]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results