EnhancerDB
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  3. vista40926[chr3:50657930-50658131]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista40926[chr3:50657930-50658131]
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Tissue distribution of vista40926
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Transcription factor that possibly regulate vista40926[chr3:50657930-50658131]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr3 50657929 50657941 YY1 JASPAR yes 2341611
chr3 50657929 50657941 YY1 JASPAR yes 70982250
chr3 50657938 50657944 GATA3 JASPAR yes 2341612
chr3 50657938 50657944 GATA3 JASPAR yes 70982251
chr3 50657947 50657960 ELF1 JASPAR yes 2341613
chr3 50657947 50657960 ELF1 JASPAR yes 70982252
chr3 50657948 50657951 MYB TRANSFAC yes 2341614
chr3 50657948 50657951 MYB TRANSFAC yes 70982253
chr3 50657949 50657960 ETV2 JASPAR yes 2341615
chr3 50657949 50657960 ETV2 JASPAR yes 70982254
chr3 50657950 50657960 GABPA JASPAR yes 2341616
chr3 50657950 50657960 GABPA JASPAR yes 70982255
chr3 50657950 50657961 FLI1 JASPAR yes 2341617
chr3 50657950 50657961 FLI1 JASPAR yes 70982256
chr3 50657961 50657976 MAFK JASPAR yes 2341618
chr3 50657961 50657976 MAFK JASPAR yes 70982257
chr3 50657965 50657976 FOXA1 JASPAR yes 2341619
chr3 50657965 50657976 FOXA1 JASPAR yes 70982258
chr3 50657965 50657980 FOXA1 JASPAR yes 2341620
chr3 50657965 50657980 FOXA1 JASPAR yes 70982259
chr3 50657974 50657985 CDX2 JASPAR yes 2341621
chr3 50657974 50657985 CDX2 JASPAR yes 70982260
chr3 50657975 50657986 HOXA10 JASPAR yes 2341622
chr3 50657975 50657986 HOXC11 JASPAR yes 2341623
chr3 50657975 50657986 HOXC12 JASPAR yes 2341624
chr3 50657975 50657986 HOXC13 JASPAR yes 2341625
chr3 50657975 50657986 HOXD12 JASPAR yes 2341626
chr3 50657975 50657986 HOXA10 JASPAR yes 70982261
chr3 50657975 50657986 HOXC11 JASPAR yes 70982262
chr3 50657975 50657986 HOXC12 JASPAR yes 70982263
chr3 50657975 50657986 HOXC13 JASPAR yes 70982264
chr3 50657975 50657986 HOXD12 JASPAR yes 70982265
chr3 50657976 50657985 CDX1 JASPAR yes 2341627
chr3 50657976 50657985 CDX1 JASPAR yes 70982266
chr3 50657976 50657986 HOXA13 JASPAR yes 2341628
chr3 50657976 50657986 HOXB13 JASPAR yes 2341629
chr3 50657976 50657986 HOXC10 JASPAR yes 2341630
chr3 50657976 50657986 HOXD11 JASPAR yes 2341631
chr3 50657976 50657986 HOXD13 JASPAR yes 2341632
chr3 50657976 50657986 HOXA13 JASPAR yes 70982267
chr3 50657976 50657986 HOXB13 JASPAR yes 70982268
chr3 50657976 50657986 HOXC10 JASPAR yes 70982269
chr3 50657976 50657986 HOXD11 JASPAR yes 70982270
chr3 50657976 50657986 HOXD13 JASPAR yes 70982271
chr3 50657980 50657994 SPI1 JASPAR yes 2341633
chr3 50657980 50657994 SPIC JASPAR yes 2341634
chr3 50657980 50657994 SPI1 JASPAR yes 70982272
chr3 50657980 50657994 SPIC JASPAR yes 70982273
chr3 50657981 50657994 ELF1 JASPAR yes 2341635
chr3 50657981 50657994 ELF1 JASPAR yes 70982274
chr3 50657983 50657994 ELF5 JASPAR yes 2341636
chr3 50657983 50657994 ELF5 JASPAR yes 70982275
chr3 50657984 50657994 GABPA JASPAR yes 2341637
chr3 50657984 50657994 GABPA JASPAR yes 70982276
chr3 50657984 50657995 FLI1 JASPAR yes 2341638
chr3 50657984 50657995 FLI1 JASPAR yes 70982277
chr3 50657989 50657999 MSC JASPAR yes 2341639
chr3 50657989 50657999 MSC JASPAR yes 70982278
chr3 50658003 50658007 NFE TRANSFAC yes 2341640
chr3 50658003 50658007 NFE TRANSFAC yes 70982279
chr3 50658012 50658015 MYB TRANSFAC yes 2341641
chr3 50658012 50658015 MYB TRANSFAC yes 70982280
chr3 50658014 50658029 RFX5 JASPAR yes 2341642
chr3 50658014 50658029 RFX5 JASPAR yes 70982281
chr3 50658031 50658045 PLAG1 JASPAR yes 2341643
chr3 50658031 50658045 PLAG1 JASPAR yes 70982282
chr3 50658048 50658052 H4TF2 TRANSFAC yes 2341644
chr3 50658048 50658052 H4TF2 TRANSFAC yes 70982283
chr3 50658051 50658062 E2F6 JASPAR yes 2341645
chr3 50658051 50658062 E2F6 JASPAR yes 70982284
chr3 50658071 50658092 IRF1 JASPAR yes 2341646
chr3 50658071 50658092 IRF1 JASPAR yes 70982285
chr3 50658073 50658084 ELK4 JASPAR yes 2341647
chr3 50658073 50658084 ELK4 JASPAR yes 70982286
chr3 50658074 50658084 ETV6 JASPAR yes 2341648
chr3 50658074 50658084 GABPA JASPAR yes 2341649
chr3 50658074 50658084 ETV6 JASPAR yes 70982287
chr3 50658074 50658084 GABPA JASPAR yes 70982288
chr3 50658074 50658085 ELF5 JASPAR yes 2341650
chr3 50658074 50658085 ELF5 JASPAR yes 70982289
chr3 50658074 50658087 ELF1 JASPAR yes 2341651
chr3 50658074 50658087 ELF1 JASPAR yes 70982290
chr3 50658074 50658088 SPI1 JASPAR yes 2341652
chr3 50658074 50658088 SPIC JASPAR yes 2341653
chr3 50658074 50658088 SPI1 JASPAR yes 70982291
chr3 50658074 50658088 SPIC JASPAR yes 70982292
chr3 50658075 50658089 IRF8 JASPAR yes 2341654
chr3 50658075 50658089 IRF8 JASPAR yes 70982293
chr3 50658076 50658082 ETS1 JASPAR yes 2341655
chr3 50658076 50658082 SPI1 JASPAR yes 2341656
chr3 50658076 50658082 ETS1 JASPAR yes 70982294
chr3 50658076 50658082 SPI1 JASPAR yes 70982295
chr3 50658079 50658094 PRDM1 JASPAR yes 2341657
chr3 50658079 50658094 PRDM1 JASPAR yes 70982296
chr3 50658090 50658102 INSM1 JASPAR yes 2341658
chr3 50658090 50658102 INSM1 JASPAR yes 70982297
chr3 50658098 50658113 ZIC3 JASPAR yes 2341659
chr3 50658098 50658113 ZIC4 JASPAR yes 2341660
chr3 50658098 50658113 ZIC3 JASPAR yes 70982298
chr3 50658098 50658113 ZIC4 JASPAR yes 70982299
chr3 50658099 50658109 FIGLA JASPAR yes 2341661
chr3 50658099 50658109 MSC JASPAR yes 2341662
chr3 50658099 50658109 TCF3 JASPAR yes 2341663
chr3 50658099 50658109 FIGLA JASPAR yes 70982300
chr3 50658099 50658109 MSC JASPAR yes 70982301
chr3 50658099 50658109 TCF3 JASPAR yes 70982302
chr3 50658100 50658109 SNAI2 JASPAR yes 2341664
chr3 50658100 50658109 SNAI2 JASPAR yes 70982303
chr3 50658101 50658106 USF2 TRANSFAC yes 2341665
chr3 50658101 50658106 USF2 TRANSFAC yes 70982304
chr3 50658117 50658124 E2F1 TRANSFAC yes 2341666
chr3 50658117 50658124 E2F1 TRANSFAC yes 70982305
chr3 50658124 50658135 BATF JASPAR yes 2341667
chr3 50658124 50658135 BATF JASPAR yes 70982306
SNP sites on vista40926[chr3:50657930-50658131]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
Genes possibly regulated by vista40926[chr3:50657930-50658131]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr3 50595462 50608458 - C3orf18 ENSG00000088543.10 50608458 0.65 1.0 3711 50528
chr3 50606583 50622366 + HEMK1 ENSG00000114735.5 50606583 0.7 1.0 3712 48653
chr3 50643921 50649262 - CISH ENSG00000114737.11 50649262 0.76 0.99 3713 91332
chr3 50648951 50686720 + MAPKAPK3 ENSG00000114738.6 50648951 0.81 1.0 3714 91021
chr3 50712672 51421629 + DOCK3 ENSG00000088538.12 50712672 0.96 1.0 3715 45459
Expression level of Genes
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miRNAs possibly regulated by vista40926[chr3:50657930-50658131]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
chr3 50712561 50712584 + hsa-miR-4787-3p MIMAT0019957 50712366 0.0013233348037053375 0.0 0.0 1174
Expression level of miRNAs
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