EnhancerDB
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  3. vista40927[chr3:50664800-50665228]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista40927[chr3:50664800-50665228]
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Tissue distribution of vista40927
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Transcription factor that possibly regulate vista40927[chr3:50664800-50665228]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr3 50664951 50665575 CTCF UCSC Txn Factor no Conserved 108529209
chr3 50665062 50665665 ZNF263 UCSC Txn Factor no Conserved 108529210
chr3 50664801 50664805 ESR1 TRANSFAC yes 2342542
chr3 50664801 50664805 ESR1 TRANSFAC yes 70982307
chr3 50664832 50664850 MAFF JASPAR yes 2342543
chr3 50664832 50664850 MAFF JASPAR yes 70982308
chr3 50664833 50664848 MAFK JASPAR yes 2342544
chr3 50664833 50664848 MAFK JASPAR yes 70982309
chr3 50664837 50664848 NRL JASPAR yes 2342545
chr3 50664837 50664848 NRL JASPAR yes 70982310
chr3 50664845 50664864 RFX2 JASPAR yes 2342546
chr3 50664845 50664864 RFX2 JASPAR yes 70982311
chr3 50664847 50664862 RFX5 JASPAR yes 2342547
chr3 50664847 50664862 RFX5 JASPAR yes 70982312
chr3 50664849 50664865 RFX2 JASPAR yes 2342548
chr3 50664849 50664865 RFX3 JASPAR yes 2342549
chr3 50664849 50664865 RFX4 JASPAR yes 2342550
chr3 50664849 50664865 RFX5 JASPAR yes 2342551
chr3 50664849 50664865 RFX2 JASPAR yes 70982313
chr3 50664849 50664865 RFX3 JASPAR yes 70982314
chr3 50664849 50664865 RFX4 JASPAR yes 70982315
chr3 50664849 50664865 RFX5 JASPAR yes 70982316
chr3 50664863 50664867 YY1 TRANSFAC yes 2342552
chr3 50664863 50664867 YY1 TRANSFAC yes 70982317
chr3 50664871 50664886 JUND JASPAR yes 2342553
chr3 50664871 50664886 JUND JASPAR yes 70982318
chr3 50664872 50664885 JUN JASPAR yes 2342554
chr3 50664872 50664885 JUN JASPAR yes 70982319
chr3 50664873 50664886 ATF4 JASPAR yes 2342555
chr3 50664873 50664886 ATF4 JASPAR yes 70982320
chr3 50664904 50664915 ESRRA JASPAR yes 2342556
chr3 50664904 50664915 ESRRA JASPAR yes 70982321
chr3 50664904 50664917 NR2F1 JASPAR yes 2342557
chr3 50664904 50664917 NR2F1 JASPAR yes 70982322
chr3 50664908 50664912 ESR1 TRANSFAC yes 2342558
chr3 50664908 50664912 ESR1 TRANSFAC yes 70982323
chr3 50664923 50664937 JUN JASPAR yes 2342559
chr3 50664923 50664937 JUN JASPAR yes 70982324
chr3 50664925 50664936 BATF JASPAR yes 2342560
chr3 50664925 50664936 BATF JASPAR yes 70982325
chr3 50664926 50664937 FOSL2 JASPAR yes 2342561
chr3 50664926 50664937 JUNB JASPAR yes 2342562
chr3 50664926 50664937 FOSL2 JASPAR yes 70982326
chr3 50664926 50664937 JUNB JASPAR yes 70982327
chr3 50664927 50664938 FOS JASPAR yes 2342563
chr3 50664927 50664938 FOSL1 JASPAR yes 2342564
chr3 50664927 50664938 JUND JASPAR yes 2342565
chr3 50664927 50664938 FOS JASPAR yes 70982328
chr3 50664927 50664938 FOSL1 JASPAR yes 70982329
chr3 50664927 50664938 JUND JASPAR yes 70982330
chr3 50664928 50664937 JDP2 JASPAR yes 2342566
chr3 50664928 50664937 JDP2 JASPAR yes 70982331
chr3 50664928 50664942 JUN JASPAR yes 2342567
chr3 50664928 50664942 JUN JASPAR yes 70982332
chr3 50664946 50664957 FLI1 JASPAR yes 2342568
chr3 50664946 50664957 FLI1 JASPAR yes 70982333
chr3 50664947 50664957 ETV6 JASPAR yes 2342569
chr3 50664947 50664957 GABPA JASPAR yes 2342570
chr3 50664947 50664957 ETV6 JASPAR yes 70982334
chr3 50664947 50664957 GABPA JASPAR yes 70982335
chr3 50664949 50664955 ETS1 JASPAR yes 2342571
chr3 50664949 50664955 SPI1 JASPAR yes 2342572
chr3 50664949 50664955 ETS1 JASPAR yes 70982336
chr3 50664949 50664955 SPI1 JASPAR yes 70982337
chr3 50664967 50664977 POU6F2 JASPAR yes 2342573
chr3 50664967 50664977 POU6F2 JASPAR yes 70982338
chr3 50664968 50664978 EMX1 JASPAR yes 2342574
chr3 50664968 50664978 EMX2 JASPAR yes 2342575
chr3 50664968 50664978 ESX1 JASPAR yes 2342576
chr3 50664968 50664978 GBX1 JASPAR yes 2342577
chr3 50664968 50664978 GBX2 JASPAR yes 2342578
chr3 50664968 50664978 GSX1 JASPAR yes 2342579
chr3 50664968 50664978 GSX2 JASPAR yes 2342580
chr3 50664968 50664978 HESX1 JASPAR yes 2342581
chr3 50664968 50664978 HOXA2 JASPAR yes 2342582
chr3 50664968 50664978 HOXB2 JASPAR yes 2342583
chr3 50664968 50664978 HOXB3 JASPAR yes 2342584
chr3 50664968 50664978 LBX2 JASPAR yes 2342585
chr3 50664968 50664978 LHX2 JASPAR yes 2342586
chr3 50664968 50664978 LHX6 JASPAR yes 2342587
chr3 50664968 50664978 MEOX1 JASPAR yes 2342588
chr3 50664968 50664978 MEOX2 JASPAR yes 2342589
chr3 50664968 50664978 MIXL1 JASPAR yes 2342590
chr3 50664968 50664978 MNX1 JASPAR yes 2342591
chr3 50664968 50664978 NOTO JASPAR yes 2342592
chr3 50664968 50664978 POU6F1 JASPAR yes 2342593
chr3 50664968 50664978 RAX JASPAR yes 2342594
chr3 50664968 50664978 EMX1 JASPAR yes 70982339
chr3 50664968 50664978 EMX2 JASPAR yes 70982340
chr3 50664968 50664978 ESX1 JASPAR yes 70982341
chr3 50664968 50664978 GBX1 JASPAR yes 70982342
chr3 50664968 50664978 GBX2 JASPAR yes 70982343
chr3 50664968 50664978 GSX1 JASPAR yes 70982344
chr3 50664968 50664978 GSX2 JASPAR yes 70982345
chr3 50664968 50664978 HESX1 JASPAR yes 70982346
chr3 50664968 50664978 HOXA2 JASPAR yes 70982347
chr3 50664968 50664978 HOXB2 JASPAR yes 70982348
chr3 50664968 50664978 HOXB3 JASPAR yes 70982349
chr3 50664968 50664978 LBX2 JASPAR yes 70982350
chr3 50664968 50664978 LHX2 JASPAR yes 70982351
chr3 50664968 50664978 LHX6 JASPAR yes 70982352
chr3 50664968 50664978 MEOX1 JASPAR yes 70982353
chr3 50664968 50664978 MEOX2 JASPAR yes 70982354
chr3 50664968 50664978 MIXL1 JASPAR yes 70982355
chr3 50664968 50664978 MNX1 JASPAR yes 70982356
chr3 50664968 50664978 NOTO JASPAR yes 70982357
chr3 50664968 50664978 POU6F1 JASPAR yes 70982358
chr3 50664968 50664978 RAX JASPAR yes 70982359
chr3 50664969 50664977 BSX JASPAR yes 2342595
chr3 50664969 50664977 DLX6 JASPAR yes 2342596
chr3 50664969 50664977 EN1 JASPAR yes 2342597
chr3 50664969 50664977 ISX JASPAR yes 2342598
chr3 50664969 50664977 LBX1 JASPAR yes 2342599
chr3 50664969 50664977 LHX9 JASPAR yes 2342600
chr3 50664969 50664977 LMX1A JASPAR yes 2342601
chr3 50664969 50664977 LMX1B JASPAR yes 2342602
chr3 50664969 50664977 NKX6-1 JASPAR yes 2342603
chr3 50664969 50664977 NKX6-2 JASPAR yes 2342604
chr3 50664969 50664977 PAX4 JASPAR yes 2342605
chr3 50664969 50664977 PDX1 JASPAR yes 2342606
chr3 50664969 50664977 PRRX1 JASPAR yes 2342607
chr3 50664969 50664977 RAX2 JASPAR yes 2342608
chr3 50664969 50664977 SHOX JASPAR yes 2342609
chr3 50664969 50664977 UNCX JASPAR yes 2342610
chr3 50664969 50664977 VAX1 JASPAR yes 2342611
chr3 50664969 50664977 VAX2 JASPAR yes 2342612
chr3 50664969 50664977 VSX1 JASPAR yes 2342613
chr3 50664969 50664977 VSX2 JASPAR yes 2342614
chr3 50664969 50664977 BSX JASPAR yes 70982360
chr3 50664969 50664977 DLX6 JASPAR yes 70982361
chr3 50664969 50664977 EN1 JASPAR yes 70982362
chr3 50664969 50664977 ISX JASPAR yes 70982363
chr3 50664969 50664977 LBX1 JASPAR yes 70982364
chr3 50664969 50664977 LHX9 JASPAR yes 70982365
chr3 50664969 50664977 LMX1A JASPAR yes 70982366
chr3 50664969 50664977 LMX1B JASPAR yes 70982367
chr3 50664969 50664977 NKX6-1 JASPAR yes 70982368
chr3 50664969 50664977 NKX6-2 JASPAR yes 70982369
chr3 50664969 50664977 PAX4 JASPAR yes 70982370
chr3 50664969 50664977 PDX1 JASPAR yes 70982371
chr3 50664969 50664977 PRRX1 JASPAR yes 70982372
chr3 50664969 50664977 RAX2 JASPAR yes 70982373
chr3 50664969 50664977 SHOX JASPAR yes 70982374
chr3 50664969 50664977 UNCX JASPAR yes 70982375
chr3 50664969 50664977 VAX1 JASPAR yes 70982376
chr3 50664969 50664977 VAX2 JASPAR yes 70982377
chr3 50664969 50664977 VSX1 JASPAR yes 70982378
chr3 50664969 50664977 VSX2 JASPAR yes 70982379
chr3 50664973 50664981 ISL2 JASPAR yes 2342615
chr3 50664973 50664981 ISL2 JASPAR yes 70982380
chr3 50664973 50664982 NKX3-2 JASPAR yes 2342616
chr3 50664973 50664982 NKX3-2 JASPAR yes 70982381
chr3 50664982 50664989 JUN TRANSFAC yes 2342617
chr3 50664982 50664989 JUN TRANSFAC yes 70982382
chr3 50664983 50665003 ESR1 JASPAR yes 2342618
chr3 50664983 50665003 ESR1 JASPAR yes 70982383
chr3 50665028 50665039 EBF1 JASPAR yes 2342619
chr3 50665028 50665039 EBF1 JASPAR yes 70982384
chr3 50665033 50665043 SP1 JASPAR yes 2342620
chr3 50665033 50665043 SP1 JASPAR yes 70982385
chr3 50665039 50665053 JUN JASPAR yes 2342621
chr3 50665039 50665053 JUN JASPAR yes 70982386
chr3 50665042 50665053 FOSL2 JASPAR yes 2342622
chr3 50665042 50665053 JUNB JASPAR yes 2342623
chr3 50665042 50665053 FOSL2 JASPAR yes 70982387
chr3 50665042 50665053 JUNB JASPAR yes 70982388
chr3 50665043 50665054 FOS JASPAR yes 2342624
chr3 50665043 50665054 FOSL1 JASPAR yes 2342625
chr3 50665043 50665054 JUND JASPAR yes 2342626
chr3 50665043 50665054 NFE2 JASPAR yes 2342627
chr3 50665043 50665054 FOS JASPAR yes 70982389
chr3 50665043 50665054 FOSL1 JASPAR yes 70982390
chr3 50665043 50665054 JUND JASPAR yes 70982391
chr3 50665043 50665054 NFE2 JASPAR yes 70982392
chr3 50665044 50665053 JDP2 JASPAR yes 2342628
chr3 50665044 50665053 JDP2 JASPAR yes 70982393
chr3 50665044 50665055 FOSL2 JASPAR yes 2342629
chr3 50665044 50665055 JUNB JASPAR yes 2342630
chr3 50665044 50665055 FOSL2 JASPAR yes 70982394
chr3 50665044 50665055 JUNB JASPAR yes 70982395
chr3 50665044 50665058 JUN JASPAR yes 2342631
chr3 50665044 50665058 JUN JASPAR yes 70982396
chr3 50665072 50665087 AR JASPAR yes 2342632
chr3 50665072 50665087 AR JASPAR yes 70982397
chr3 50665103 50665115 GLI2 JASPAR yes 2342633
chr3 50665103 50665115 GLI2 JASPAR yes 70982398
chr3 50665114 50665118 H4TF2 TRANSFAC yes 2342634
chr3 50665114 50665118 H4TF2 TRANSFAC yes 70982399
chr3 50665114 50665133 CTCF JASPAR yes 2342635
chr3 50665114 50665133 CTCF JASPAR yes 70982400
chr3 50665125 50665129 LFA1 TRANSFAC yes 2342636
chr3 50665125 50665129 LFA1 TRANSFAC yes 70982401
chr3 50665129 50665140 NFKB1 JASPAR yes 2342637
chr3 50665129 50665140 NFKB1 JASPAR yes 70982402
chr3 50665137 50665147 SP1 JASPAR yes 2342638
chr3 50665137 50665147 SP1 JASPAR yes 70982403
chr3 50665148 50665164 RFX4 JASPAR yes 2342639
chr3 50665148 50665164 RFX4 JASPAR yes 70982404
chr3 50665163 50665173 SREBF1 JASPAR yes 2342640
chr3 50665163 50665173 SREBF2 JASPAR yes 2342641
chr3 50665163 50665173 TBX21 JASPAR yes 2342642
chr3 50665163 50665173 SREBF1 JASPAR yes 70982405
chr3 50665163 50665173 SREBF2 JASPAR yes 70982406
chr3 50665163 50665173 TBX21 JASPAR yes 70982407
chr3 50665163 50665176 EOMES JASPAR yes 2342643
chr3 50665163 50665176 EOMES JASPAR yes 70982408
chr3 50665164 50665172 MGA JASPAR yes 2342644
chr3 50665164 50665172 MGA JASPAR yes 70982409
chr3 50665199 50665209 SP1 JASPAR yes 2342645
chr3 50665199 50665209 SP1 JASPAR yes 70982410
chr3 50665205 50665225 ESR1 JASPAR yes 2342646
chr3 50665205 50665225 ESR1 JASPAR yes 70982411
SNP sites on vista40927[chr3:50664800-50665228]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr3 50664918 rs139122053 C T no 6729987
chr3 50665058 rs569321956 G A
CTCF JUN
6729988
chr3 50665068 rs4340700 G A,T
CTCF ZNF263
6729989
chr3 50665103 rs578098099 G A,T
CTCF GLI2 ZNF263
6729990
Genes possibly regulated by vista40927[chr3:50664800-50665228]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr3 50595462 50608458 - C3orf18 ENSG00000088543.10 50608458 0.65 1.0 3711 43658
chr3 50606583 50622366 + HEMK1 ENSG00000114735.5 50606583 0.7 1.0 3712 41783
chr3 50643921 50649262 - CISH ENSG00000114737.11 50649262 0.76 0.99 3713 84462
chr3 50648951 50686720 + MAPKAPK3 ENSG00000114738.6 50648951 0.81 1.0 3714 84151
chr3 50712672 51421629 + DOCK3 ENSG00000088538.12 50712672 0.96 1.0 3715 52556
Expression level of Genes
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miRNAs possibly regulated by vista40927[chr3:50664800-50665228]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
chr3 50712561 50712584 + hsa-miR-4787-3p MIMAT0019957 50712366 0.0015182186234817814 0.0 0.0 1174
Expression level of miRNAs
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