EnhancerDB
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  3. vista410[chr1:12579035-12579403]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista410[chr1:12579035-12579403]
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Tissue distribution of vista410
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Transcription factor that possibly regulate vista410[chr1:12579035-12579403]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 12579026 12579035 SOX9 JASPAR yes 26828646
chr1 12579026 12579035 SOX9 JASPAR yes 118233229
chr1 12579026 12579042 SOX4 JASPAR yes 26828647
chr1 12579026 12579042 SOX4 JASPAR yes 118233230
chr1 12579027 12579042 SOX21 JASPAR yes 26828648
chr1 12579027 12579042 SOX21 JASPAR yes 118233231
chr1 12579049 12579055 NFE2 TRANSFAC yes 26828649
chr1 12579049 12579055 NFE2 TRANSFAC yes 118233232
chr1 12579056 12579061 SP1 TRANSFAC yes 26828650
chr1 12579056 12579061 SP1 TRANSFAC yes 118233233
chr1 12579068 12579073 SP1 TRANSFAC yes 26828651
chr1 12579068 12579073 SP1 TRANSFAC yes 118233234
chr1 12579076 12579086 NKX2-3 JASPAR yes 26828652
chr1 12579076 12579086 NKX2-3 JASPAR yes 118233235
chr1 12579077 12579090 SCRT2 JASPAR yes 26828653
chr1 12579077 12579090 SCRT2 JASPAR yes 118233236
chr1 12579124 12579145 REST JASPAR yes 26828654
chr1 12579124 12579145 REST JASPAR yes 118233237
chr1 12579138 12579153 MAFK JASPAR yes 26828655
chr1 12579138 12579153 MAFK JASPAR yes 118233238
chr1 12579142 12579153 NRL JASPAR yes 26828656
chr1 12579142 12579153 NRL JASPAR yes 118233239
chr1 12579151 12579162 EBF1 JASPAR yes 26828657
chr1 12579151 12579162 EBF1 JASPAR yes 118233240
chr1 12579158 12579169 CDX2 JASPAR yes 26828658
chr1 12579158 12579169 CDX2 JASPAR yes 118233241
chr1 12579159 12579170 HOXA10 JASPAR yes 26828659
chr1 12579159 12579170 HOXC11 JASPAR yes 26828660
chr1 12579159 12579170 HOXC12 JASPAR yes 26828661
chr1 12579159 12579170 HOXC13 JASPAR yes 26828662
chr1 12579159 12579170 HOXD12 JASPAR yes 26828663
chr1 12579159 12579170 HOXA10 JASPAR yes 118233242
chr1 12579159 12579170 HOXC11 JASPAR yes 118233243
chr1 12579159 12579170 HOXC12 JASPAR yes 118233244
chr1 12579159 12579170 HOXC13 JASPAR yes 118233245
chr1 12579159 12579170 HOXD12 JASPAR yes 118233246
chr1 12579160 12579169 CDX1 JASPAR yes 26828664
chr1 12579160 12579169 CDX1 JASPAR yes 118233247
chr1 12579160 12579170 HOXA13 JASPAR yes 26828665
chr1 12579160 12579170 HOXB13 JASPAR yes 26828666
chr1 12579160 12579170 HOXC10 JASPAR yes 26828667
chr1 12579160 12579170 HOXD11 JASPAR yes 26828668
chr1 12579160 12579170 HOXD13 JASPAR yes 26828669
chr1 12579160 12579170 HOXA13 JASPAR yes 118233248
chr1 12579160 12579170 HOXB13 JASPAR yes 118233249
chr1 12579160 12579170 HOXC10 JASPAR yes 118233250
chr1 12579160 12579170 HOXD11 JASPAR yes 118233251
chr1 12579160 12579170 HOXD13 JASPAR yes 118233252
chr1 12579167 12579180 EOMES JASPAR yes 26828670
chr1 12579167 12579180 EOMES JASPAR yes 118233253
chr1 12579169 12579179 TBR1 JASPAR yes 26828671
chr1 12579169 12579179 TBR1 JASPAR yes 118233254
chr1 12579169 12579180 TBX20 JASPAR yes 26828672
chr1 12579169 12579180 TBX2 JASPAR yes 26828673
chr1 12579169 12579180 TBX20 JASPAR yes 118233255
chr1 12579169 12579180 TBX2 JASPAR yes 118233256
chr1 12579170 12579180 TBX21 JASPAR yes 26828674
chr1 12579170 12579180 TBX21 JASPAR yes 118233257
chr1 12579171 12579179 MGA JASPAR yes 26828675
chr1 12579171 12579179 TBX15 JASPAR yes 26828676
chr1 12579171 12579179 TBX1 JASPAR yes 26828677
chr1 12579171 12579179 TBX4 JASPAR yes 26828678
chr1 12579171 12579179 TBX5 JASPAR yes 26828679
chr1 12579171 12579179 MGA JASPAR yes 118233258
chr1 12579171 12579179 TBX15 JASPAR yes 118233259
chr1 12579171 12579179 TBX1 JASPAR yes 118233260
chr1 12579171 12579179 TBX4 JASPAR yes 118233261
chr1 12579171 12579179 TBX5 JASPAR yes 118233262
chr1 12579189 12579199 SREBF2 JASPAR yes 26828680
chr1 12579189 12579199 SREBF2 JASPAR yes 118233263
chr1 12579191 12579202 BATF JASPAR yes 26828681
chr1 12579191 12579202 BATF JASPAR yes 118233264
chr1 12579203 12579218 AR JASPAR yes 26828682
chr1 12579203 12579218 AR JASPAR yes 118233265
chr1 12579210 12579221 ESRRA JASPAR yes 26828683
chr1 12579210 12579221 ESRRA JASPAR yes 118233266
chr1 12579210 12579223 NR2F1 JASPAR yes 26828684
chr1 12579210 12579223 NR2F1 JASPAR yes 118233267
chr1 12579212 12579220 NR4A2 JASPAR yes 26828685
chr1 12579212 12579220 NR4A2 JASPAR yes 118233268
chr1 12579214 12579218 ESR1 TRANSFAC yes 26828686
chr1 12579214 12579218 ESR1 TRANSFAC yes 118233269
chr1 12579236 12579242 PEA3 TRANSFAC yes 26828687
chr1 12579236 12579242 PEA3 TRANSFAC yes 118233270
chr1 12579237 12579245 FEV JASPAR yes 26828688
chr1 12579237 12579245 FEV JASPAR yes 118233271
chr1 12579242 12579252 TBX21 JASPAR yes 26828689
chr1 12579242 12579252 TBX21 JASPAR yes 118233272
chr1 12579242 12579253 TBX20 JASPAR yes 26828690
chr1 12579242 12579253 TBX2 JASPAR yes 26828691
chr1 12579242 12579253 TBX20 JASPAR yes 118233273
chr1 12579242 12579253 TBX2 JASPAR yes 118233274
chr1 12579242 12579255 EOMES JASPAR yes 26828692
chr1 12579242 12579255 EOMES JASPAR yes 118233275
chr1 12579243 12579253 TBR1 JASPAR yes 26828693
chr1 12579243 12579253 TBR1 JASPAR yes 118233276
chr1 12579271 12579282 NFKB1 JASPAR yes 26828694
chr1 12579271 12579282 NFKB1 JASPAR yes 118233277
chr1 12579272 12579282 RELA JASPAR yes 26828695
chr1 12579272 12579282 REL JASPAR yes 26828696
chr1 12579272 12579282 RELA JASPAR yes 118233278
chr1 12579272 12579282 REL JASPAR yes 118233279
chr1 12579281 12579285 LFA1 TRANSFAC yes 26828697
chr1 12579281 12579285 LFA1 TRANSFAC yes 118233280
chr1 12579290 12579303 TFAP2A JASPAR yes 26828698
chr1 12579290 12579303 TFAP2B JASPAR yes 26828699
chr1 12579290 12579303 TFAP2C JASPAR yes 26828700
chr1 12579290 12579303 TFAP2A JASPAR yes 118233281
chr1 12579290 12579303 TFAP2B JASPAR yes 118233282
chr1 12579290 12579303 TFAP2C JASPAR yes 118233283
chr1 12579291 12579305 EBF1 JASPAR yes 26828701
chr1 12579291 12579305 EBF1 JASPAR yes 118233284
chr1 12579292 12579303 EBF1 JASPAR yes 26828702
chr1 12579292 12579303 EBF1 JASPAR yes 118233285
chr1 12579297 12579318 ZNF263 JASPAR yes 26828703
chr1 12579297 12579318 ZNF263 JASPAR yes 118233286
chr1 12579298 12579318 RREB1 JASPAR yes 26828704
chr1 12579298 12579318 RREB1 JASPAR yes 118233287
chr1 12579299 12579305 MAZ TRANSFAC yes 26828705
chr1 12579299 12579305 MAZ TRANSFAC yes 118233288
chr1 12579303 12579317 PLAG1 JASPAR yes 26828706
chr1 12579303 12579317 PLAG1 JASPAR yes 118233289
chr1 12579309 12579322 SMAD2 JASPAR yes 26828707
chr1 12579309 12579322 SMAD2 JASPAR yes 118233290
chr1 12579315 12579334 CTCF JASPAR yes 26828708
chr1 12579315 12579334 CTCF JASPAR yes 118233291
chr1 12579320 12579326 MAZ TRANSFAC yes 26828709
chr1 12579320 12579326 MAZ TRANSFAC yes 118233292
chr1 12579324 12579331 SP1 TRANSFAC yes 26828710
chr1 12579324 12579331 SP1 TRANSFAC yes 118233293
chr1 12579324 12579345 ZNF263 JASPAR yes 26828711
chr1 12579324 12579345 ZNF263 JASPAR yes 118233294
chr1 12579326 12579331 SP1 TRANSFAC yes 26828712
chr1 12579326 12579331 SP1 TRANSFAC yes 118233295
chr1 12579334 12579344 SP1 JASPAR yes 26828713
chr1 12579334 12579344 SP1 JASPAR yes 118233296
chr1 12579336 12579342 MAZ TRANSFAC yes 26828714
chr1 12579336 12579342 MAZ TRANSFAC yes 118233297
chr1 12579340 12579347 SP1 TRANSFAC yes 26828715
chr1 12579340 12579347 SP1 TRANSFAC yes 118233298
chr1 12579341 12579355 MTF1 JASPAR yes 26828716
chr1 12579341 12579355 MTF1 JASPAR yes 118233299
chr1 12579342 12579347 SP1 TRANSFAC yes 26828717
chr1 12579342 12579347 SP1 TRANSFAC yes 118233300
chr1 12579343 12579348 SP1 TRANSFAC yes 26828718
chr1 12579343 12579348 SP1 TRANSFAC yes 118233301
chr1 12579379 12579390 NFKB1 JASPAR yes 26828719
chr1 12579379 12579390 NFKB1 JASPAR yes 118233302
chr1 12579380 12579391 NFKB1 JASPAR yes 26828720
chr1 12579380 12579391 NFKB1 JASPAR yes 118233303
chr1 12579390 12579403 TFAP2A JASPAR yes 26828721
chr1 12579390 12579403 TFAP2B JASPAR yes 26828722
chr1 12579390 12579403 TFAP2A JASPAR yes 118233304
chr1 12579390 12579403 TFAP2B JASPAR yes 118233305
chr1 12579403 12579407 YY1 TRANSFAC yes 26828723
chr1 12579403 12579407 YY1 TRANSFAC yes 118233306
SNP sites on vista410[chr1:12579035-12579403]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 12579226 rs143949737 C T no 86236
chr1 12579382 rs550346824 G A
NFKB1
86237
Genes possibly regulated by vista410[chr1:12579035-12579403]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 12627939 12677737 - DHRS3 ENSG00000162496.4 12677737 0.85 1.0 169 1666
Expression level of Genes
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miRNAs possibly regulated by vista410[chr1:12579035-12579403]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results