EnhancerDB
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  3. vista41040[chr3:55511418-55511654]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista41040[chr3:55511418-55511654]
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Tissue distribution of vista41040
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Transcription factor that possibly regulate vista41040[chr3:55511418-55511654]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr3 55511438 55511451 SCRT2 JASPAR yes 2518273
chr3 55511438 55511451 SCRT2 JASPAR yes 70987655
chr3 55511459 55511469 NEUROD2 JASPAR yes 2518274
chr3 55511459 55511469 OLIG1 JASPAR yes 2518275
chr3 55511459 55511469 OLIG2 JASPAR yes 2518276
chr3 55511459 55511469 OLIG3 JASPAR yes 2518277
chr3 55511459 55511469 NEUROD2 JASPAR yes 70987656
chr3 55511459 55511469 OLIG1 JASPAR yes 70987657
chr3 55511459 55511469 OLIG2 JASPAR yes 70987658
chr3 55511459 55511469 OLIG3 JASPAR yes 70987659
chr3 55511460 55511472 SRF JASPAR yes 2518278
chr3 55511460 55511472 SRF JASPAR yes 70987660
chr3 55511487 55511497 SREBF2 JASPAR yes 2518279
chr3 55511487 55511497 TFAP4 JASPAR yes 2518280
chr3 55511487 55511497 SREBF2 JASPAR yes 70987661
chr3 55511487 55511497 TFAP4 JASPAR yes 70987662
chr3 55511506 55511511 GATA1 TRANSFAC yes 2518281
chr3 55511506 55511511 GATA1 TRANSFAC yes 70987663
chr3 55511519 55511523 NFE TRANSFAC yes 2518282
chr3 55511519 55511523 NFE TRANSFAC yes 70987664
chr3 55511552 55511558 ZNF354C JASPAR yes 2518283
chr3 55511552 55511558 ZNF354C JASPAR yes 70987665
chr3 55511600 55511618 NR3C1 JASPAR yes 2518284
chr3 55511600 55511618 NR3C1 JASPAR yes 70987666
chr3 55511607 55511624 BCL6B JASPAR yes 2518285
chr3 55511607 55511624 BCL6B JASPAR yes 70987667
chr3 55511618 55511628 MNX1 JASPAR yes 2518286
chr3 55511618 55511628 MNX1 JASPAR yes 70987668
chr3 55511618 55511629 HOXA10 JASPAR yes 2518287
chr3 55511618 55511629 HOXA10 JASPAR yes 70987669
chr3 55511619 55511627 BARX1 JASPAR yes 2518288
chr3 55511619 55511627 BARX1 JASPAR yes 70987670
chr3 55511648 55511663 AR JASPAR yes 2518289
chr3 55511648 55511663 AR JASPAR yes 70987671
SNP sites on vista41040[chr3:55511418-55511654]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr3 55511436 rs192706625 G A no 6746496
chr3 55511478 rs571162608 T C no 6746497
chr3 55511599 rs553565929 C A,G no 6746498
chr3 55511607 rs141720183 A G
BCL6B NR3C1
6746499
Genes possibly regulated by vista41040[chr3:55511418-55511654]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr3 55499743 55523973 - WNT5A ENSG00000114251.9 55523973 0.86 0.83 3781 87681
Expression level of Genes
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miRNAs possibly regulated by vista41040[chr3:55511418-55511654]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results