EnhancerDB
  1. Home
  2. Enhancers
  3. vista41041[chr3:55516458-55517187]
View enhancers around input chromosomal region
Back to top

Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista41041[chr3:55516458-55517187]
Back to top
Tissue distribution of vista41041
Back to top
Transcription factor that possibly regulate vista41041[chr3:55516458-55517187]
Back to top
Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr3 55516449 55516459 SP1 JASPAR yes 2518537
chr3 55516449 55516459 SP1 JASPAR yes 70987672
chr3 55516455 55516470 FOXP1 JASPAR yes 2518538
chr3 55516455 55516470 FOXP1 JASPAR yes 70987673
chr3 55516455 55516476 IRF1 JASPAR yes 2518539
chr3 55516455 55516476 IRF1 JASPAR yes 70987674
chr3 55516459 55516474 STAT2 JASPAR yes 2518540
chr3 55516459 55516474 STAT2 JASPAR yes 70987675
chr3 55516459 55516480 IRF1 JASPAR yes 2518541
chr3 55516459 55516480 IRF1 JASPAR yes 70987676
chr3 55516460 55516475 FOXP1 JASPAR yes 2518542
chr3 55516460 55516475 FOXP1 JASPAR yes 70987677
chr3 55516463 55516478 PRDM1 JASPAR yes 2518543
chr3 55516463 55516478 PRDM1 JASPAR yes 70987678
chr3 55516471 55516487 E2F2 JASPAR yes 2518544
chr3 55516471 55516487 E2F2 JASPAR yes 70987679
chr3 55516488 55516493 SP1 TRANSFAC yes 2518545
chr3 55516488 55516493 SP1 TRANSFAC yes 70987680
chr3 55516526 55516541 NR2C2 JASPAR yes 2518546
chr3 55516526 55516541 NR2C2 JASPAR yes 70987681
chr3 55516529 55516533 LFA1 TRANSFAC yes 2518547
chr3 55516529 55516533 LFA1 TRANSFAC yes 70987682
chr3 55516565 55516579 PLAG1 JASPAR yes 2518548
chr3 55516565 55516579 PLAG1 JASPAR yes 70987683
chr3 55516577 55516586 NFIX JASPAR yes 2518549
chr3 55516577 55516586 NFIX JASPAR yes 70987684
chr3 55516577 55516587 NFIA JASPAR yes 2518550
chr3 55516577 55516587 NFIA JASPAR yes 70987685
chr3 55516579 55516585 NFIC JASPAR yes 2518551
chr3 55516579 55516585 NFIC JASPAR yes 70987686
chr3 55516601 55516606 SP1 TRANSFAC yes 2518552
chr3 55516601 55516606 SP1 TRANSFAC yes 70987687
chr3 55516601 55516607 SP1 TRANSFAC yes 2518553
chr3 55516601 55516607 SP1 TRANSFAC yes 70987688
chr3 55516634 55516647 ELF1 JASPAR yes 2518554
chr3 55516634 55516647 ELF1 JASPAR yes 70987689
chr3 55516636 55516647 ETV2 JASPAR yes 2518555
chr3 55516636 55516647 ETV2 JASPAR yes 70987690
chr3 55516637 55516644 SPIB JASPAR yes 2518556
chr3 55516637 55516644 SPIB JASPAR yes 70987691
chr3 55516637 55516647 ETV6 JASPAR yes 2518557
chr3 55516637 55516647 ETV6 JASPAR yes 70987692
chr3 55516637 55516648 FLI1 JASPAR yes 2518558
chr3 55516637 55516648 FLI1 JASPAR yes 70987693
chr3 55516638 55516646 FEV JASPAR yes 2518559
chr3 55516638 55516646 FEV JASPAR yes 70987694
chr3 55516646 55516658 SRF JASPAR yes 2518560
chr3 55516646 55516658 SRF JASPAR yes 70987695
chr3 55516648 55516660 GLI2 JASPAR yes 2518561
chr3 55516648 55516660 GLI2 JASPAR yes 70987696
chr3 55516649 55516661 ZBTB7A JASPAR yes 2518562
chr3 55516649 55516661 ZBTB7A JASPAR yes 70987697
chr3 55516654 55516658 H4TF2 TRANSFAC yes 2518563
chr3 55516654 55516658 H4TF2 TRANSFAC yes 70987698
chr3 55516656 55516662 MZF1 JASPAR yes 2518564
chr3 55516656 55516662 MZF1 JASPAR yes 70987699
chr3 55516695 55516700 MYC TRANSFAC yes 2518565
chr3 55516695 55516700 MYC TRANSFAC yes 70987700
chr3 55516701 55516707 MZF1 JASPAR yes 2518566
chr3 55516701 55516707 MZF1 JASPAR yes 70987701
chr3 55516713 55516719 TCF4 TRANSFAC yes 2518567
chr3 55516713 55516719 TCF4 TRANSFAC yes 70987702
chr3 55516715 55516729 GLIS2 JASPAR yes 2518568
chr3 55516715 55516729 GLIS2 JASPAR yes 70987703
chr3 55516750 55516760 RELA JASPAR yes 2518569
chr3 55516750 55516760 REL JASPAR yes 2518570
chr3 55516750 55516760 RELA JASPAR yes 70987704
chr3 55516750 55516760 REL JASPAR yes 70987705
chr3 55516750 55516761 NFKB1 JASPAR yes 2518571
chr3 55516750 55516761 NFKB1 JASPAR yes 70987706
chr3 55516750 55516763 NFKB1 JASPAR yes 2518572
chr3 55516750 55516763 NFKB2 JASPAR yes 2518573
chr3 55516750 55516763 NFKB1 JASPAR yes 70987707
chr3 55516750 55516763 NFKB2 JASPAR yes 70987708
chr3 55516751 55516761 NFKB1 JASPAR yes 2518574
chr3 55516751 55516761 RELA JASPAR yes 2518575
chr3 55516751 55516761 NFKB1 JASPAR yes 70987709
chr3 55516751 55516761 RELA JASPAR yes 70987710
chr3 55516751 55516762 NFKB1 JASPAR yes 2518576
chr3 55516751 55516762 NFKB1 JASPAR yes 70987711
chr3 55516757 55516763 MZF1 JASPAR yes 2518577
chr3 55516757 55516763 MZF1 JASPAR yes 70987712
chr3 55516785 55516789 NFE TRANSFAC yes 2518578
chr3 55516785 55516789 NFE TRANSFAC yes 70987713
chr3 55516785 55516790 GATA1 TRANSFAC yes 2518579
chr3 55516785 55516790 GATA1 TRANSFAC yes 70987714
chr3 55516785 55516791 GATA3 JASPAR yes 2518580
chr3 55516785 55516791 GATA3 JASPAR yes 70987715
chr3 55516790 55516796 MZF1 JASPAR yes 2518581
chr3 55516790 55516796 MZF1 JASPAR yes 70987716
chr3 55516791 55516801 SP1 JASPAR yes 2518582
chr3 55516791 55516801 SP1 JASPAR yes 70987717
chr3 55516797 55516803 SP1 TRANSFAC yes 2518583
chr3 55516797 55516803 SP1 TRANSFAC yes 70987718
chr3 55516799 55516804 SP1 TRANSFAC yes 2518584
chr3 55516799 55516804 SP1 TRANSFAC yes 70987719
chr3 55516805 55516816 TBX2 JASPAR yes 2518585
chr3 55516805 55516816 TBX2 JASPAR yes 70987720
chr3 55516806 55516816 TBR1 JASPAR yes 2518586
chr3 55516806 55516816 TBR1 JASPAR yes 70987721
chr3 55516815 55516823 FEV JASPAR yes 2518587
chr3 55516815 55516823 FEV JASPAR yes 70987722
chr3 55516815 55516830 TFAP2C JASPAR yes 2518588
chr3 55516815 55516830 TFAP2C JASPAR yes 70987723
chr3 55516818 55516829 EBF1 JASPAR yes 2518589
chr3 55516818 55516829 EBF1 JASPAR yes 70987724
chr3 55516826 55516832 MAZ TRANSFAC yes 2518590
chr3 55516826 55516832 MAZ TRANSFAC yes 70987725
chr3 55516826 55516837 E2F6 JASPAR yes 2518591
chr3 55516826 55516837 E2F6 JASPAR yes 70987726
chr3 55516840 55516846 TCF4 TRANSFAC yes 2518592
chr3 55516840 55516846 TCF4 TRANSFAC yes 70987727
chr3 55516870 55516876 TCF4 TRANSFAC yes 2518593
chr3 55516870 55516876 TCF4 TRANSFAC yes 70987728
chr3 55516881 55516896 TFAP2A JASPAR yes 2518594
chr3 55516881 55516896 TFAP2C JASPAR yes 2518595
chr3 55516881 55516896 TFAP2A JASPAR yes 70987729
chr3 55516881 55516896 TFAP2C JASPAR yes 70987730
chr3 55516884 55516890 MZF1 JASPAR yes 2518596
chr3 55516884 55516890 MZF1 JASPAR yes 70987731
chr3 55516884 55516895 EBF1 JASPAR yes 2518597
chr3 55516884 55516895 EBF1 JASPAR yes 70987732
chr3 55516884 55516896 TFAP2A JASPAR yes 2518598
chr3 55516884 55516896 TFAP2B JASPAR yes 2518599
chr3 55516884 55516896 TFAP2C JASPAR yes 2518600
chr3 55516884 55516896 TFAP2A JASPAR yes 70987733
chr3 55516884 55516896 TFAP2B JASPAR yes 70987734
chr3 55516884 55516896 TFAP2C JASPAR yes 70987735
chr3 55516887 55516898 ESRRA JASPAR yes 2518601
chr3 55516887 55516898 ESRRA JASPAR yes 70987736
chr3 55516891 55516895 LFA1 TRANSFAC yes 2518602
chr3 55516891 55516895 LFA1 TRANSFAC yes 70987737
chr3 55516900 55516914 MTF1 JASPAR yes 2518603
chr3 55516900 55516914 MTF1 JASPAR yes 70987738
chr3 55516911 55516931 RREB1 JASPAR yes 2518604
chr3 55516911 55516931 RREB1 JASPAR yes 70987739
chr3 55516912 55516928 ZNF143 JASPAR yes 2518605
chr3 55516912 55516928 ZNF143 JASPAR yes 70987740
chr3 55516940 55516951 FOXB1 JASPAR yes 2518606
chr3 55516940 55516951 FOXB1 JASPAR yes 70987741
chr3 55516941 55516945 YY1 TRANSFAC yes 2518607
chr3 55516941 55516945 YY1 TRANSFAC yes 70987742
chr3 55516970 55516990 TP63 JASPAR yes 2518608
chr3 55516970 55516990 TP63 JASPAR yes 70987743
chr3 55516971 55516989 TP53 JASPAR yes 2518609
chr3 55516971 55516989 TP63 JASPAR yes 2518610
chr3 55516971 55516989 TP73 JASPAR yes 2518611
chr3 55516971 55516989 TP53 JASPAR yes 70987744
chr3 55516971 55516989 TP63 JASPAR yes 70987745
chr3 55516971 55516989 TP73 JASPAR yes 70987746
chr3 55516972 55516987 TP53 JASPAR yes 2518612
chr3 55516972 55516987 TP53 JASPAR yes 70987747
chr3 55516973 55516988 TP53 JASPAR yes 2518613
chr3 55516973 55516988 TP53 JASPAR yes 70987748
chr3 55516987 55516993 ETS1 JASPAR yes 2518614
chr3 55516987 55516993 ETS1 JASPAR yes 70987749
chr3 55517006 55517011 NFY TRANSFAC yes 2518615
chr3 55517006 55517011 NFY TRANSFAC yes 70987750
chr3 55517047 55517067 RREB1 JASPAR yes 2518616
chr3 55517047 55517067 RREB1 JASPAR yes 70987751
chr3 55517057 55517067 SP1 JASPAR yes 2518617
chr3 55517057 55517067 SP1 JASPAR yes 70987752
chr3 55517058 55517066 SP1 TRANSFAC yes 2518618
chr3 55517058 55517066 SP1 TRANSFAC yes 70987753
chr3 55517058 55517067 SP1 TRANSFAC yes 2518619
chr3 55517058 55517067 SP1 TRANSFAC yes 70987754
chr3 55517059 55517064 SP1 TRANSFAC yes 2518620
chr3 55517059 55517064 SP1 TRANSFAC yes 70987755
chr3 55517060 55517065 SP1 TRANSFAC yes 2518621
chr3 55517060 55517065 SP1 TRANSFAC yes 70987756
chr3 55517060 55517066 SP1 TRANSFAC yes 2518622
chr3 55517060 55517066 SP1 TRANSFAC yes 70987757
chr3 55517088 55517091 MYB TRANSFAC yes 2518623
chr3 55517088 55517091 MYB TRANSFAC yes 70987758
chr3 55517117 55517123 LEF1 TRANSFAC yes 2518624
chr3 55517117 55517123 SOX10 JASPAR yes 2518625
chr3 55517117 55517123 LEF1 TRANSFAC yes 70987759
chr3 55517117 55517123 SOX10 JASPAR yes 70987760
chr3 55517130 55517145 RUNX2 JASPAR yes 2518626
chr3 55517130 55517145 RUNX2 JASPAR yes 70987761
chr3 55517136 55517156 RREB1 JASPAR yes 2518627
chr3 55517136 55517156 RREB1 JASPAR yes 70987762
chr3 55517142 55517162 RREB1 JASPAR yes 2518628
chr3 55517142 55517162 RREB1 JASPAR yes 70987763
chr3 55517162 55517177 TFAP2C JASPAR yes 2518629
chr3 55517162 55517177 TFAP2C JASPAR yes 70987764
chr3 55517164 55517176 TFAP2A JASPAR yes 2518630
chr3 55517164 55517176 TFAP2B JASPAR yes 2518631
chr3 55517164 55517176 TFAP2C JASPAR yes 2518632
chr3 55517164 55517176 TFAP2A JASPAR yes 70987765
chr3 55517164 55517176 TFAP2B JASPAR yes 70987766
chr3 55517164 55517176 TFAP2C JASPAR yes 70987767
chr3 55517164 55517178 EBF1 JASPAR yes 2518633
chr3 55517164 55517178 EBF1 JASPAR yes 70987768
chr3 55517164 55517179 TFAP2A JASPAR yes 2518634
chr3 55517164 55517179 TFAP2A JASPAR yes 70987769
chr3 55517165 55517176 EBF1 JASPAR yes 2518635
chr3 55517165 55517176 EBF1 JASPAR yes 70987770
SNP sites on vista41041[chr3:55516458-55517187]
Back to top
chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr3 55516628 rs147582548 G A no 6746518
chr3 55516800 rs112580272 C A,G
SP1
6746519
chr3 55516805 rs187502202 C G
TBX2
6746520
chr3 55516959 rs577485795 G T no 6746521
chr3 55516963 rs815541 G C no 6746522
chr3 55516988 rs551114221 T A
ETS1 TP53 TP63 TP73
6746523
chr3 55517001 rs570947918 G C no 6746524
chr3 55517016 rs374031747 T C no 6746525
chr3 55517047 rs815540 A G
RREB1
6746526
chr3 55517095 rs568980360 AT A no 6746527
Genes possibly regulated by vista41041[chr3:55516458-55517187]
Back to top
Details of Genes
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr3 55499743 55523973 - WNT5A ENSG00000114251.9 55523973 0.86 0.83 3781 93214
Expression level of Genes
Back to top
miRNAs possibly regulated by vista41041[chr3:55516458-55517187]
Back to top
Details of miRNAs
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
Back to top
No results