EnhancerDB
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  3. vista41043[chr3:55518078-55518594]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista41043[chr3:55518078-55518594]
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Tissue distribution of vista41043
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Transcription factor that possibly regulate vista41043[chr3:55518078-55518594]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr3 55518135 55518149 SPI1 JASPAR yes 2518727
chr3 55518135 55518149 SPI1 JASPAR yes 70987784
chr3 55518137 55518149 EHF JASPAR yes 2518728
chr3 55518137 55518149 EHF JASPAR yes 70987785
chr3 55518137 55518150 ELF3 JASPAR yes 2518729
chr3 55518137 55518150 ELF3 JASPAR yes 70987786
chr3 55518138 55518143 SP1 TRANSFAC yes 2518730
chr3 55518138 55518143 SP1 TRANSFAC yes 70987787
chr3 55518138 55518149 ELF5 JASPAR yes 2518731
chr3 55518138 55518149 ELF5 JASPAR yes 70987788
chr3 55518141 55518147 ETS1 JASPAR yes 2518732
chr3 55518141 55518147 SPI1 JASPAR yes 2518733
chr3 55518141 55518147 ETS1 JASPAR yes 70987789
chr3 55518141 55518147 SPI1 JASPAR yes 70987790
chr3 55518152 55518156 YY1 TRANSFAC yes 2518734
chr3 55518152 55518156 YY1 TRANSFAC yes 70987791
chr3 55518181 55518191 SP1 JASPAR yes 2518735
chr3 55518181 55518191 SP1 JASPAR yes 70987792
chr3 55518184 55518194 MZF1 JASPAR yes 2518736
chr3 55518184 55518194 MZF1 JASPAR yes 70987793
chr3 55518188 55518198 NFKB1 JASPAR yes 2518737
chr3 55518188 55518198 NFKB1 JASPAR yes 70987794
chr3 55518188 55518199 NFKB1 JASPAR yes 2518738
chr3 55518188 55518199 NFKB1 JASPAR yes 70987795
chr3 55518189 55518199 RELA JASPAR yes 2518739
chr3 55518189 55518199 REL JASPAR yes 2518740
chr3 55518189 55518199 RELA JASPAR yes 70987796
chr3 55518189 55518199 REL JASPAR yes 70987797
chr3 55518214 55518226 E2F8 JASPAR yes 2518741
chr3 55518214 55518226 E2F8 JASPAR yes 70987798
chr3 55518216 55518237 IRF1 JASPAR yes 2518742
chr3 55518216 55518237 IRF1 JASPAR yes 70987799
chr3 55518217 55518227 NFATC3 JASPAR yes 2518743
chr3 55518217 55518227 NFATC3 JASPAR yes 70987800
chr3 55518218 55518233 IRF9 JASPAR yes 2518744
chr3 55518218 55518233 IRF9 JASPAR yes 70987801
chr3 55518219 55518226 NFATC2 JASPAR yes 2518745
chr3 55518219 55518226 NFATC2 JASPAR yes 70987802
chr3 55518219 55518233 IRF7 JASPAR yes 2518746
chr3 55518219 55518233 IRF8 JASPAR yes 2518747
chr3 55518219 55518233 IRF7 JASPAR yes 70987803
chr3 55518219 55518233 IRF8 JASPAR yes 70987804
chr3 55518220 55518234 STAT1 JASPAR yes 2518748
chr3 55518220 55518234 STAT1 JASPAR yes 70987805
chr3 55518220 55518235 PRDM1 JASPAR yes 2518749
chr3 55518220 55518235 STAT2 JASPAR yes 2518750
chr3 55518220 55518235 PRDM1 JASPAR yes 70987806
chr3 55518220 55518235 STAT2 JASPAR yes 70987807
chr3 55518220 55518238 IRF2 JASPAR yes 2518751
chr3 55518220 55518238 IRF2 JASPAR yes 70987808
chr3 55518227 55518237 MSC JASPAR yes 2518752
chr3 55518227 55518237 MSC JASPAR yes 70987809
chr3 55518233 55518241 FOXO3 JASPAR yes 2518753
chr3 55518233 55518241 FOXO3 JASPAR yes 70987810
chr3 55518238 55518244 MZF1 JASPAR yes 2518754
chr3 55518238 55518244 MZF1 JASPAR yes 70987811
chr3 55518240 55518255 LEF1 JASPAR yes 2518755
chr3 55518240 55518255 LEF1 JASPAR yes 70987812
chr3 55518299 55518304 MYC TRANSFAC yes 2518756
chr3 55518299 55518304 MYC TRANSFAC yes 70987813
chr3 55518300 55518314 E2F7 JASPAR yes 2518757
chr3 55518300 55518314 E2F7 JASPAR yes 70987814
chr3 55518318 55518333 ESR2 JASPAR yes 2518758
chr3 55518318 55518333 ESR2 JASPAR yes 70987815
chr3 55518328 55518339 EBF1 JASPAR yes 2518759
chr3 55518328 55518339 EBF1 JASPAR yes 70987816
chr3 55518348 55518359 E2F4 JASPAR yes 2518760
chr3 55518348 55518359 E2F4 JASPAR yes 70987817
chr3 55518379 55518384 SP1 TRANSFAC yes 2518761
chr3 55518379 55518384 SP1 TRANSFAC yes 70987818
chr3 55518380 55518385 SP1 TRANSFAC yes 2518762
chr3 55518380 55518385 SP1 TRANSFAC yes 70987819
chr3 55518388 55518400 HINFP JASPAR yes 2518763
chr3 55518388 55518400 HINFP JASPAR yes 70987820
chr3 55518391 55518395 H4TF2 TRANSFAC yes 2518764
chr3 55518391 55518395 H4TF2 TRANSFAC yes 70987821
chr3 55518411 55518417 SOX10 JASPAR yes 2518765
chr3 55518411 55518417 SOX10 JASPAR yes 70987822
chr3 55518437 55518453 T JASPAR yes 2518766
chr3 55518437 55518453 T JASPAR yes 70987823
chr3 55518490 55518511 ZNF263 JASPAR yes 2518767
chr3 55518490 55518511 ZNF263 JASPAR yes 70987824
chr3 55518504 55518511 CEBPA TRANSFAC yes 2518768
chr3 55518504 55518511 CEBPA TRANSFAC yes 70987825
chr3 55518519 55518525 GATA3 JASPAR yes 2518769
chr3 55518519 55518525 GATA3 JASPAR yes 70987826
chr3 55518528 55518533 SP1 TRANSFAC yes 2518770
chr3 55518528 55518533 SP1 TRANSFAC yes 70987827
chr3 55518574 55518579 SP1 TRANSFAC yes 2518771
chr3 55518574 55518579 SP1 TRANSFAC yes 70987828
SNP sites on vista41043[chr3:55518078-55518594]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr3 55518096 rs17711385 A G no 6746537
chr3 55518099 rs577702075 C A no 6746538
chr3 55518204 rs145540781 G C no 6746539
chr3 55518274 rs76520427 G A no 6746540
chr3 55518353 rs77579929 G A,T
E2F4
6746541
chr3 55518565 rs531095015 CA C no 6746542
Genes possibly regulated by vista41043[chr3:55518078-55518594]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr3 55499743 55523973 - WNT5A ENSG00000114251.9 55523973 0.86 0.83 3781 94621
Expression level of Genes
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miRNAs possibly regulated by vista41043[chr3:55518078-55518594]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results