EnhancerDB
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  3. vista41045[chr3:55650041-55650551]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista41045[chr3:55650041-55650551]
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Tissue distribution of vista41045
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Transcription factor that possibly regulate vista41045[chr3:55650041-55650551]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr3 55650054 55650064 NFATC3 JASPAR yes 2531641
chr3 55650054 55650064 NFATC3 JASPAR yes 70987888
chr3 55650057 55650067 RELA JASPAR yes 2531642
chr3 55650057 55650067 RELA JASPAR yes 70987889
chr3 55650086 55650091 ETS2 TRANSFAC yes 2531643
chr3 55650086 55650091 ETS2 TRANSFAC yes 70987890
chr3 55650086 55650107 ZNF263 JASPAR yes 2531644
chr3 55650086 55650107 ZNF263 JASPAR yes 70987891
chr3 55650097 55650103 YY1 JASPAR yes 2531645
chr3 55650097 55650103 YY1 JASPAR yes 70987892
chr3 55650133 55650144 RUNX1 JASPAR yes 2531646
chr3 55650133 55650144 RUNX1 JASPAR yes 70987893
chr3 55650137 55650149 TEAD1 JASPAR yes 2531647
chr3 55650137 55650149 TEAD1 JASPAR yes 70987894
chr3 55650139 55650143 YY1 TRANSFAC yes 2531648
chr3 55650139 55650143 YY1 TRANSFAC yes 70987895
chr3 55650139 55650150 JUND JASPAR yes 2531649
chr3 55650139 55650150 JUND JASPAR yes 70987896
chr3 55650140 55650151 NFE2L2 JASPAR yes 2531650
chr3 55650140 55650151 NFE2L2 JASPAR yes 70987897
chr3 55650148 55650161 ELF1 JASPAR yes 2531651
chr3 55650148 55650161 ELF1 JASPAR yes 70987898
chr3 55650151 55650158 SPIB JASPAR yes 2531652
chr3 55650151 55650158 SPIB JASPAR yes 70987899
chr3 55650152 55650160 EHF JASPAR yes 2531653
chr3 55650152 55650160 EHF JASPAR yes 70987900
chr3 55650153 55650160 SPI1 JASPAR yes 2531654
chr3 55650153 55650160 SPI1 JASPAR yes 70987901
chr3 55650196 55650207 CEBPB JASPAR yes 2531655
chr3 55650196 55650207 CEBPB JASPAR yes 70987902
chr3 55650197 55650208 CEBPA JASPAR yes 2531656
chr3 55650197 55650208 CEBPA JASPAR yes 70987903
chr3 55650203 55650217 TCF7L2 JASPAR yes 2531657
chr3 55650203 55650217 TCF7L2 JASPAR yes 70987904
chr3 55650203 55650218 LEF1 JASPAR yes 2531658
chr3 55650203 55650218 LEF1 JASPAR yes 70987905
chr3 55650207 55650213 TCF4 TRANSFAC yes 2531659
chr3 55650207 55650213 TCF4 TRANSFAC yes 70987906
chr3 55650209 55650220 ESRRA JASPAR yes 2531660
chr3 55650209 55650220 ESRRA JASPAR yes 70987907
chr3 55650211 55650219 NR4A2 JASPAR yes 2531661
chr3 55650211 55650219 NR4A2 JASPAR yes 70987908
chr3 55650213 55650217 ESR1 TRANSFAC yes 2531662
chr3 55650213 55650217 ESR1 TRANSFAC yes 70987909
chr3 55650217 55650238 IRF1 JASPAR yes 2531663
chr3 55650217 55650238 IRF1 JASPAR yes 70987910
chr3 55650246 55650261 FOXP1 JASPAR yes 2531664
chr3 55650246 55650261 FOXP1 JASPAR yes 70987911
chr3 55650247 55650258 FOXP2 JASPAR yes 2531665
chr3 55650247 55650258 FOXP2 JASPAR yes 70987912
chr3 55650247 55650259 FOXC2 JASPAR yes 2531666
chr3 55650247 55650259 FOXC2 JASPAR yes 70987913
chr3 55650249 55650260 FOXA1 JASPAR yes 2531667
chr3 55650249 55650260 FOXA1 JASPAR yes 70987914
chr3 55650285 55650288 MYB TRANSFAC yes 2531668
chr3 55650285 55650288 MYB TRANSFAC yes 70987915
chr3 55650308 55650313 GATA2 JASPAR yes 2531669
chr3 55650308 55650313 GATA2 JASPAR yes 70987916
chr3 55650320 55650329 NKX3-2 JASPAR yes 2531670
chr3 55650320 55650329 NKX3-2 JASPAR yes 70987917
chr3 55650349 55650370 REST JASPAR yes 2531671
chr3 55650349 55650370 REST JASPAR yes 70987918
chr3 55650353 55650362 SOX9 JASPAR yes 2531672
chr3 55650353 55650362 SOX9 JASPAR yes 70987919
chr3 55650359 55650372 ZBTB18 JASPAR yes 2531673
chr3 55650359 55650372 ZBTB18 JASPAR yes 70987920
chr3 55650363 55650368 MYC TRANSFAC yes 2531674
chr3 55650363 55650368 MYC TRANSFAC yes 70987921
chr3 55650370 55650384 STAT1 JASPAR yes 2531675
chr3 55650370 55650384 STAT1 JASPAR yes 70987922
chr3 55650370 55650385 PRDM1 JASPAR yes 2531676
chr3 55650370 55650385 STAT2 JASPAR yes 2531677
chr3 55650370 55650385 PRDM1 JASPAR yes 70987923
chr3 55650370 55650385 STAT2 JASPAR yes 70987924
chr3 55650373 55650383 NFATC3 JASPAR yes 2531678
chr3 55650373 55650383 NFATC3 JASPAR yes 70987925
chr3 55650375 55650386 NFKB1 JASPAR yes 2531679
chr3 55650375 55650386 NFKB1 JASPAR yes 70987926
chr3 55650424 55650428 YY1 TRANSFAC yes 2531680
chr3 55650424 55650428 YY1 TRANSFAC yes 70987927
chr3 55650447 55650451 YY1 TRANSFAC yes 2531681
chr3 55650447 55650451 YY1 TRANSFAC yes 70987928
chr3 55650455 55650458 MYB TRANSFAC yes 2531682
chr3 55650455 55650458 MYB TRANSFAC yes 70987929
chr3 55650472 55650487 MEF2C JASPAR yes 2531683
chr3 55650472 55650487 MEF2C JASPAR yes 70987930
chr3 55650473 55650488 MEF2A JASPAR yes 2531684
chr3 55650473 55650488 MEF2A JASPAR yes 70987931
chr3 55650474 55650486 MEF2A JASPAR yes 2531685
chr3 55650474 55650486 MEF2B JASPAR yes 2531686
chr3 55650474 55650486 MEF2D JASPAR yes 2531687
chr3 55650474 55650486 MEF2A JASPAR yes 70987932
chr3 55650474 55650486 MEF2B JASPAR yes 70987933
chr3 55650474 55650486 MEF2D JASPAR yes 70987934
chr3 55650498 55650513 SOX21 JASPAR yes 2531688
chr3 55650498 55650513 SOX21 JASPAR yes 70987935
chr3 55650503 55650507 TEAD2 TRANSFAC yes 2531689
chr3 55650503 55650507 TEAD2 TRANSFAC yes 70987936
chr3 55650510 55650526 SOX8 JASPAR yes 2531690
chr3 55650510 55650526 SOX8 JASPAR yes 70987937
chr3 55650519 55650530 FOXA1 JASPAR yes 2531691
chr3 55650519 55650530 FOXA1 JASPAR yes 70987938
chr3 55650519 55650534 FOXA1 JASPAR yes 2531692
chr3 55650519 55650534 FOXA1 JASPAR yes 70987939
chr3 55650520 55650531 FOXB1 JASPAR yes 2531693
chr3 55650520 55650531 FOXC1 JASPAR yes 2531694
chr3 55650520 55650531 FOXB1 JASPAR yes 70987940
chr3 55650520 55650531 FOXC1 JASPAR yes 70987941
chr3 55650520 55650532 FOXC2 JASPAR yes 2531695
chr3 55650520 55650532 FOXC2 JASPAR yes 70987942
chr3 55650537 55650548 FOXB1 JASPAR yes 2531696
chr3 55650537 55650548 FOXB1 JASPAR yes 70987943
chr3 55650538 55650546 FOXL1 JASPAR yes 2531697
chr3 55650538 55650546 FOXL1 JASPAR yes 70987944
chr3 55650538 55650549 FOXB1 JASPAR yes 2531698
chr3 55650538 55650549 FOXB1 JASPAR yes 70987945
chr3 55650539 55650550 FOXB1 JASPAR yes 2531699
chr3 55650539 55650550 FOXB1 JASPAR yes 70987946
chr3 55650540 55650548 FOXL1 JASPAR yes 2531700
chr3 55650540 55650548 FOXL1 JASPAR yes 70987947
chr3 55650542 55650550 FOXL1 JASPAR yes 2531701
chr3 55650542 55650550 FOXL1 JASPAR yes 70987948
chr3 55650543 55650554 FOXB1 JASPAR yes 2531702
chr3 55650543 55650554 FOXB1 JASPAR yes 70987949
SNP sites on vista41045[chr3:55650041-55650551]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr3 55650114 rs11718823 T G no 6747802
chr3 55650117 rs368432726 T C no 6747803
chr3 55650306 rs78504945 T C no 6747804
chr3 55650336 rs137943976 AG A no 6747805
chr3 55650338 rs2362848 T A no 6747806
chr3 55650423 rs77732050 C T no 6747807
chr3 55650539 rs73830684 T C
FOXB1 FOXL1
6747808
Genes possibly regulated by vista41045[chr3:55650041-55650551]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
Expression level of Genes
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No results
miRNAs possibly regulated by vista41045[chr3:55650041-55650551]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results