EnhancerDB
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  3. vista41051[chr3:55659848-55660431]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista41051[chr3:55659848-55660431]
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Tissue distribution of vista41051
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Transcription factor that possibly regulate vista41051[chr3:55659848-55660431]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr3 55659835 55659853 SRF JASPAR yes 2533113
chr3 55659835 55659853 SRF JASPAR yes 70988255
chr3 55659847 55659865 MAFF JASPAR yes 2533115
chr3 55659847 55659865 MAFF JASPAR yes 70988256
chr3 55659848 55659863 MAFK JASPAR yes 2533116
chr3 55659848 55659863 MAFK JASPAR yes 70988257
chr3 55659850 55659854 NFE TRANSFAC yes 2533117
chr3 55659850 55659854 NFE TRANSFAC yes 70988258
chr3 55659852 55659863 NRL JASPAR yes 2533118
chr3 55659852 55659863 NRL JASPAR yes 70988259
chr3 55659861 55659867 SOX10 JASPAR yes 2533119
chr3 55659861 55659867 SOX10 JASPAR yes 70988260
chr3 55659884 55659902 E2F3 JASPAR yes 2533120
chr3 55659884 55659902 E2F3 JASPAR yes 70988261
chr3 55659894 55659898 YY1 TRANSFAC yes 2533121
chr3 55659894 55659898 YY1 TRANSFAC yes 70988262
chr3 55659897 55659902 GATA2 JASPAR yes 2533122
chr3 55659897 55659902 GATA2 JASPAR yes 70988263
chr3 55659918 55659921 MYB TRANSFAC yes 2533123
chr3 55659918 55659921 MYB TRANSFAC yes 70988264
chr3 55659934 55659954 TP53 JASPAR yes 2533124
chr3 55659934 55659954 TP53 JASPAR yes 70988265
chr3 55659947 55659951 YY1 TRANSFAC yes 2533125
chr3 55659947 55659951 YY1 TRANSFAC yes 70988266
chr3 55659954 55659974 RREB1 JASPAR yes 2533126
chr3 55659954 55659974 RREB1 JASPAR yes 70988267
chr3 55659956 55659976 RREB1 JASPAR yes 2533127
chr3 55659956 55659976 RREB1 JASPAR yes 70988268
chr3 55659958 55659973 RUNX2 JASPAR yes 2533128
chr3 55659958 55659973 RUNX2 JASPAR yes 70988269
chr3 55659967 55659972 SP1 TRANSFAC yes 2533129
chr3 55659967 55659972 SP1 TRANSFAC yes 70988270
chr3 55659982 55659986 YY1 TRANSFAC yes 2533130
chr3 55659982 55659986 YY1 TRANSFAC yes 70988271
chr3 55660004 55660020 T JASPAR yes 2533131
chr3 55660004 55660020 T JASPAR yes 70988272
chr3 55660012 55660020 TBX5 JASPAR yes 2533132
chr3 55660012 55660020 TBX5 JASPAR yes 70988273
chr3 55660026 55660047 IRF1 JASPAR yes 2533133
chr3 55660026 55660047 IRF1 JASPAR yes 70988274
chr3 55660028 55660043 IRF9 JASPAR yes 2533134
chr3 55660028 55660043 IRF9 JASPAR yes 70988275
chr3 55660029 55660043 IRF7 JASPAR yes 2533135
chr3 55660029 55660043 IRF7 JASPAR yes 70988276
chr3 55660046 55660061 STAT2 JASPAR yes 2533136
chr3 55660046 55660061 STAT2 JASPAR yes 70988277
chr3 55660052 55660069 BCL6B JASPAR yes 2533137
chr3 55660052 55660069 BCL6B JASPAR yes 70988278
chr3 55660055 55660066 STAT3 JASPAR yes 2533138
chr3 55660055 55660066 STAT3 JASPAR yes 70988279
chr3 55660074 55660092 IRF2 JASPAR yes 2533139
chr3 55660074 55660092 IRF2 JASPAR yes 70988280
chr3 55660075 55660096 IRF1 JASPAR yes 2533140
chr3 55660075 55660096 IRF1 JASPAR yes 70988281
chr3 55660077 55660092 PRDM1 JASPAR yes 2533141
chr3 55660077 55660092 STAT2 JASPAR yes 2533142
chr3 55660077 55660092 PRDM1 JASPAR yes 70988282
chr3 55660077 55660092 STAT2 JASPAR yes 70988283
chr3 55660078 55660092 STAT1 JASPAR yes 2533143
chr3 55660078 55660092 STAT1 JASPAR yes 70988284
chr3 55660079 55660091 IRF1 JASPAR yes 2533144
chr3 55660079 55660091 IRF1 JASPAR yes 70988285
chr3 55660087 55660103 ZNF143 JASPAR yes 2533145
chr3 55660087 55660103 ZNF143 JASPAR yes 70988286
chr3 55660093 55660105 YY1 JASPAR yes 2533146
chr3 55660093 55660105 YY1 JASPAR yes 70988287
chr3 55660100 55660111 CEBPB JASPAR yes 2533147
chr3 55660100 55660111 CEBPB JASPAR yes 70988288
chr3 55660101 55660111 CEBPB JASPAR yes 2533148
chr3 55660101 55660111 CEBPD JASPAR yes 2533149
chr3 55660101 55660111 CEBPE JASPAR yes 2533150
chr3 55660101 55660111 CEBPG JASPAR yes 2533151
chr3 55660101 55660111 CEBPB JASPAR yes 70988289
chr3 55660101 55660111 CEBPD JASPAR yes 70988290
chr3 55660101 55660111 CEBPE JASPAR yes 70988291
chr3 55660101 55660111 CEBPG JASPAR yes 70988292
chr3 55660101 55660112 CEBPA JASPAR yes 2533152
chr3 55660101 55660112 CEBPA JASPAR yes 70988293
chr3 55660125 55660140 STAT2 JASPAR yes 2533153
chr3 55660125 55660140 STAT2 JASPAR yes 70988294
chr3 55660132 55660136 YY1 TRANSFAC yes 2533154
chr3 55660132 55660136 YY1 TRANSFAC yes 70988295
chr3 55660163 55660174 FLI1 JASPAR yes 2533155
chr3 55660163 55660174 FLI1 JASPAR yes 70988296
chr3 55660164 55660169 ETS2 TRANSFAC yes 2533156
chr3 55660164 55660169 ETS2 TRANSFAC yes 70988297
chr3 55660164 55660172 FEV JASPAR yes 2533157
chr3 55660164 55660172 FEV JASPAR yes 70988298
chr3 55660165 55660172 SPI1 JASPAR yes 2533158
chr3 55660165 55660172 SPI1 JASPAR yes 70988299
chr3 55660174 55660177 MYB TRANSFAC yes 2533159
chr3 55660174 55660177 MYB TRANSFAC yes 70988300
chr3 55660175 55660191 SOX8 JASPAR yes 2533160
chr3 55660175 55660191 SOX8 JASPAR yes 70988301
chr3 55660197 55660215 RARA JASPAR yes 2533161
chr3 55660197 55660215 RARA JASPAR yes 70988302
chr3 55660199 55660214 ESR2 JASPAR yes 2533162
chr3 55660199 55660214 ESR2 JASPAR yes 70988303
chr3 55660204 55660217 NR2F1 JASPAR yes 2533163
chr3 55660204 55660217 NR2F1 JASPAR yes 70988304
chr3 55660206 55660217 ESRRA JASPAR yes 2533164
chr3 55660206 55660217 ESRRB JASPAR yes 2533165
chr3 55660206 55660217 ESRRA JASPAR yes 70988305
chr3 55660206 55660217 ESRRB JASPAR yes 70988306
chr3 55660207 55660215 NR4A2 JASPAR yes 2533166
chr3 55660207 55660215 NR4A2 JASPAR yes 70988307
chr3 55660221 55660232 ESRRA JASPAR yes 2533167
chr3 55660221 55660232 ESRRA JASPAR yes 70988308
chr3 55660222 55660226 NFE TRANSFAC yes 2533168
chr3 55660222 55660226 NFE TRANSFAC yes 70988309
chr3 55660230 55660236 YY1 JASPAR yes 2533169
chr3 55660230 55660236 YY1 JASPAR yes 70988310
chr3 55660276 55660280 YY1 TRANSFAC yes 2533170
chr3 55660276 55660280 YY1 TRANSFAC yes 70988311
chr3 55660280 55660287 NFATC2 JASPAR yes 2533171
chr3 55660280 55660287 NFATC2 JASPAR yes 70988312
chr3 55660281 55660289 FOXO3 JASPAR yes 2533172
chr3 55660281 55660289 FOXO3 JASPAR yes 70988313
chr3 55660283 55660295 GRHL1 JASPAR yes 2533173
chr3 55660283 55660295 GRHL1 JASPAR yes 70988314
chr3 55660299 55660314 RUNX2 JASPAR yes 2533174
chr3 55660299 55660314 RUNX2 JASPAR yes 70988315
chr3 55660310 55660318 LEF1 TRANSFAC yes 2533175
chr3 55660310 55660318 LEF1 TRANSFAC yes 70988316
chr3 55660311 55660325 RORA JASPAR yes 2533176
chr3 55660311 55660325 RORA JASPAR yes 70988317
chr3 55660314 55660324 RORA JASPAR yes 2533177
chr3 55660314 55660324 RORA JASPAR yes 70988318
chr3 55660318 55660335 RARA JASPAR yes 2533178
chr3 55660318 55660335 RARA JASPAR yes 70988319
chr3 55660319 55660323 ESR1 TRANSFAC yes 2533179
chr3 55660319 55660323 ESR1 TRANSFAC yes 70988320
chr3 55660321 55660334 POU2F2 JASPAR yes 2533180
chr3 55660321 55660334 POU2F2 JASPAR yes 70988321
chr3 55660348 55660363 HNF1A JASPAR yes 2533181
chr3 55660348 55660363 HNF1A JASPAR yes 70988322
chr3 55660349 55660362 HNF1B JASPAR yes 2533182
chr3 55660349 55660362 HNF1B JASPAR yes 70988323
chr3 55660350 55660354 H1TF2 TRANSFAC yes 2533183
chr3 55660350 55660354 NFE TRANSFAC yes 2533184
chr3 55660350 55660354 SRF TRANSFAC yes 2533185
chr3 55660350 55660354 H1TF2 TRANSFAC yes 70988324
chr3 55660350 55660354 NFE TRANSFAC yes 70988325
chr3 55660350 55660354 SRF TRANSFAC yes 70988326
chr3 55660350 55660362 HNF1B JASPAR yes 2533186
chr3 55660350 55660362 HNF1B JASPAR yes 70988327
chr3 55660374 55660385 NFIL3 JASPAR yes 2533187
chr3 55660374 55660385 NFIL3 JASPAR yes 70988328
chr3 55660407 55660428 ZNF263 JASPAR yes 2533188
chr3 55660407 55660428 ZNF263 JASPAR yes 70988329
chr3 55660414 55660420 HiNF-A TRANSFAC yes 2533189
chr3 55660414 55660420 HiNF-A TRANSFAC yes 70988330
chr3 55660427 55660430 MYB TRANSFAC yes 2533190
chr3 55660427 55660430 MYB TRANSFAC yes 70988331
SNP sites on vista41051[chr3:55659848-55660431]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr3 55659955 rs114179929 A T
RREB1
6747897
chr3 55659972 rs145115058 G A
RREB1 RUNX2 SP1
6747898
chr3 55660056 rs538357358 G A
BCL6B STAT2 STAT3
6747899
chr3 55660177 rs115111086 A G
MYB SOX8
6747900
chr3 55660178 rs552772020 C T
SOX8
6747901
chr3 55660269 rs77224384 G C no 6747902
chr3 55660423 rs187215647 T G
ZNF263
6747903
Genes possibly regulated by vista41051[chr3:55659848-55660431]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
Expression level of Genes
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No results
miRNAs possibly regulated by vista41051[chr3:55659848-55660431]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results