EnhancerDB
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  3. vista41057[chr3:56154046-56154390]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista41057[chr3:56154046-56154390]
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Tissue distribution of vista41057
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Transcription factor that possibly regulate vista41057[chr3:56154046-56154390]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr3 56154002 56154191 FOS UCSC Txn Factor no Conserved 108529322
chr3 56154052 56154067 RUNX2 JASPAR yes 2566157
chr3 56154052 56154067 RUNX2 JASPAR yes 70988533
chr3 56154062 56154072 HMBOX1 JASPAR yes 2566158
chr3 56154062 56154072 HMBOX1 JASPAR yes 70988534
chr3 56154079 56154093 JUN JASPAR yes 2566159
chr3 56154079 56154093 JUN JASPAR yes 70988535
chr3 56154081 56154092 BATF JASPAR yes 2566160
chr3 56154081 56154092 BATF JASPAR yes 70988536
chr3 56154082 56154093 FOSL2 JASPAR yes 2566161
chr3 56154082 56154093 JUNB JASPAR yes 2566162
chr3 56154082 56154093 FOSL2 JASPAR yes 70988537
chr3 56154082 56154093 JUNB JASPAR yes 70988538
chr3 56154083 56154094 FOS JASPAR yes 2566163
chr3 56154083 56154094 FOS JASPAR yes 70988539
chr3 56154089 56154092 MYB TRANSFAC yes 2566164
chr3 56154089 56154092 MYB TRANSFAC yes 70988540
chr3 56154089 56154101 PKNOX1 JASPAR yes 2566165
chr3 56154089 56154101 PKNOX2 JASPAR yes 2566166
chr3 56154089 56154101 TGIF1 JASPAR yes 2566167
chr3 56154089 56154101 TGIF2 JASPAR yes 2566168
chr3 56154089 56154101 PKNOX1 JASPAR yes 70988541
chr3 56154089 56154101 PKNOX2 JASPAR yes 70988542
chr3 56154089 56154101 TGIF1 JASPAR yes 70988543
chr3 56154089 56154101 TGIF2 JASPAR yes 70988544
chr3 56154090 56154100 MYF6 JASPAR yes 2566169
chr3 56154090 56154100 NEUROG2 JASPAR yes 2566170
chr3 56154090 56154100 MYF6 JASPAR yes 70988545
chr3 56154090 56154100 NEUROG2 JASPAR yes 70988546
chr3 56154090 56154102 TAL1 JASPAR yes 2566171
chr3 56154090 56154102 TAL1 JASPAR yes 70988547
chr3 56154096 56154113 RARA JASPAR yes 2566172
chr3 56154096 56154113 RARA JASPAR yes 70988548
chr3 56154100 56154106 TCF4 TRANSFAC yes 2566173
chr3 56154100 56154106 TCF4 TRANSFAC yes 70988549
chr3 56154119 56154130 CEBPB JASPAR yes 2566174
chr3 56154119 56154130 CEBPB JASPAR yes 70988550
chr3 56154120 56154130 CEBPB JASPAR yes 2566175
chr3 56154120 56154130 CEBPD JASPAR yes 2566176
chr3 56154120 56154130 CEBPE JASPAR yes 2566177
chr3 56154120 56154130 CEBPB JASPAR yes 70988551
chr3 56154120 56154130 CEBPD JASPAR yes 70988552
chr3 56154120 56154130 CEBPE JASPAR yes 70988553
chr3 56154120 56154131 CEBPA JASPAR yes 2566178
chr3 56154120 56154131 CEBPA JASPAR yes 70988554
chr3 56154153 56154158 MYB TRANSFAC yes 2566179
chr3 56154153 56154158 MYB TRANSFAC yes 70988555
chr3 56154156 56154177 IRF1 JASPAR yes 2566180
chr3 56154156 56154177 IRF1 JASPAR yes 70988556
chr3 56154160 56154175 PRDM1 JASPAR yes 2566181
chr3 56154160 56154175 PRDM1 JASPAR yes 70988557
chr3 56154160 56154181 IRF1 JASPAR yes 2566182
chr3 56154160 56154181 IRF1 JASPAR yes 70988558
chr3 56154164 56154179 PRDM1 JASPAR yes 2566183
chr3 56154164 56154179 PRDM1 JASPAR yes 70988559
chr3 56154193 56154203 RELA JASPAR yes 2566184
chr3 56154193 56154203 RELA JASPAR yes 70988560
chr3 56154196 56154201 H4TF1 TRANSFAC yes 2566185
chr3 56154196 56154201 H4TF1 TRANSFAC yes 70988561
chr3 56154196 56154208 ELF1 JASPAR yes 2566186
chr3 56154196 56154208 ELF1 JASPAR yes 70988562
chr3 56154196 56154209 ELF1 JASPAR yes 2566187
chr3 56154196 56154209 ELF1 JASPAR yes 70988563
chr3 56154197 56154205 FEV JASPAR yes 2566188
chr3 56154197 56154205 FEV JASPAR yes 70988564
chr3 56154207 56154213 MYC TRANSFAC yes 2566189
chr3 56154207 56154213 MYC TRANSFAC yes 70988565
chr3 56154243 56154258 RFX5 JASPAR yes 2566190
chr3 56154243 56154258 RFX5 JASPAR yes 70988566
chr3 56154245 56154259 PLAG1 JASPAR yes 2566191
chr3 56154245 56154259 PLAG1 JASPAR yes 70988567
chr3 56154249 56154263 SPIC JASPAR yes 2566192
chr3 56154249 56154263 SPIC JASPAR yes 70988568
chr3 56154255 56154260 ETS2 TRANSFAC yes 2566193
chr3 56154255 56154260 ETS2 TRANSFAC yes 70988569
chr3 56154272 56154277 NFY TRANSFAC yes 2566194
chr3 56154272 56154277 NFY TRANSFAC yes 70988570
chr3 56154277 56154288 NRF1 JASPAR yes 2566195
chr3 56154277 56154288 NRF1 JASPAR yes 70988571
chr3 56154300 56154311 E2F4 JASPAR yes 2566196
chr3 56154300 56154311 E2F6 JASPAR yes 2566197
chr3 56154300 56154311 E2F4 JASPAR yes 70988572
chr3 56154300 56154311 E2F6 JASPAR yes 70988573
chr3 56154301 56154312 E2F1 JASPAR yes 2566198
chr3 56154301 56154312 E2F1 JASPAR yes 70988574
chr3 56154335 56154345 NKX2-3 JASPAR yes 2566199
chr3 56154335 56154345 NKX2-3 JASPAR yes 70988575
chr3 56154347 56154351 NFE TRANSFAC yes 2566200
chr3 56154347 56154351 NFE TRANSFAC yes 70988576
chr3 56154359 56154363 TEAD2 TRANSFAC yes 2566201
chr3 56154359 56154363 TEAD2 TRANSFAC yes 70988577
chr3 56154359 56154364 TBP TRANSFAC yes 2566202
chr3 56154359 56154364 TBP TRANSFAC yes 70988578
chr3 56154359 56154365 TFIID TRANSFAC yes 2566203
chr3 56154359 56154365 TFIID TRANSFAC yes 70988579
SNP sites on vista41057[chr3:56154046-56154390]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr3 56154078 rs75478290 T C
FOS
6750641
chr3 56154174 rs548914156 G T
FOS IRF1 PRDM1
6750642
chr3 56154254 rs78111993 A C
PLAG1 RFX5 SPIC
6750643
chr3 56154313 rs183669473 G A no 6750644
chr3 56154321 rs13078548 C A no 6750645
chr3 56154344 rs146411997 G C
NKX2-3
6750646
chr3 56154371 rs573833388 A G no 6750647
chr3 56154378 rs17056469 T A no 6750648
chr3 56154383 rs562105143 G T no 6750649
Genes possibly regulated by vista41057[chr3:56154046-56154390]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
Expression level of Genes
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No results
miRNAs possibly regulated by vista41057[chr3:56154046-56154390]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results