EnhancerDB
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  3. vista41065[chr3:56769464-56769764]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista41065[chr3:56769464-56769764]
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Tissue distribution of vista41065
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Transcription factor that possibly regulate vista41065[chr3:56769464-56769764]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr3 56769464 56769479 STAT2 JASPAR yes 70988789
chr3 56769469 56769489 RREB1 JASPAR yes 70988790
chr3 56769472 56769487 RUNX2 JASPAR yes 70988791
chr3 56769476 56769496 RREB1 JASPAR yes 70988792
chr3 56769482 56769493 E2F6 JASPAR yes 70988793
chr3 56769496 56769500 NFE TRANSFAC yes 70988794
chr3 56769496 56769501 GATA1 TRANSFAC yes 70988795
chr3 56769496 56769502 GATA3 JASPAR yes 70988796
chr3 56769500 56769506 LEF1 TRANSFAC yes 70988797
chr3 56769500 56769506 SOX10 JASPAR yes 70988798
chr3 56769516 56769520 NFE TRANSFAC yes 70988799
chr3 56769516 56769521 GATA1 TRANSFAC yes 70988800
chr3 56769516 56769522 GATA3 JASPAR yes 70988801
chr3 56769524 56769535 CDX2 JASPAR yes 70988802
chr3 56769525 56769536 HOXA10 JASPAR yes 70988803
chr3 56769526 56769535 CDX1 JASPAR yes 70988804
chr3 56769526 56769536 HOXA13 JASPAR yes 70988805
chr3 56769526 56769536 HOXB13 JASPAR yes 70988806
chr3 56769526 56769536 HOXD13 JASPAR yes 70988807
chr3 56769541 56769549 GATA3 JASPAR yes 70988808
chr3 56769552 56769563 TFAP2A JASPAR yes 70988809
chr3 56769552 56769563 TFAP2B JASPAR yes 70988810
chr3 56769552 56769563 TFAP2C JASPAR yes 70988811
chr3 56769567 56769570 MYB TRANSFAC yes 70988812
chr3 56769617 56769631 ZIC1 JASPAR yes 70988813
chr3 56769617 56769632 ZIC3 JASPAR yes 70988814
chr3 56769617 56769632 ZIC4 JASPAR yes 70988815
chr3 56769636 56769640 YY1 TRANSFAC yes 70988816
chr3 56769644 56769648 YY1 TRANSFAC yes 70988817
chr3 56769655 56769672 BCL6B JASPAR yes 70988818
chr3 56769656 56769671 STAT1 JASPAR yes 70988819
chr3 56769658 56769669 STAT1 JASPAR yes 70988820
chr3 56769658 56769669 STAT3 JASPAR yes 70988821
chr3 56769668 56769683 HSF1 JASPAR yes 70988822
chr3 56769690 56769703 HSF2 JASPAR yes 70988823
chr3 56769702 56769715 SCRT2 JASPAR yes 70988824
chr3 56769702 56769717 SCRT1 JASPAR yes 70988825
chr3 56769706 56769715 SNAI2 JASPAR yes 70988826
chr3 56769706 56769716 ID4 JASPAR yes 70988827
chr3 56769706 56769716 TCF3 JASPAR yes 70988828
chr3 56769706 56769716 TCF4 JASPAR yes 70988829
chr3 56769727 56769748 IRF1 JASPAR yes 70988830
chr3 56769744 56769761 BCL6B JASPAR yes 70988831
SNP sites on vista41065[chr3:56769464-56769764]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr3 56769511 rs78663884 A C no 6752779
chr3 56769562 rs138609909 C T
TFAP2A TFAP2B TFAP2C
6752780
chr3 56769603 rs149268920 G A,C no 6752781
chr3 56769631 rs143499512 G C
ZIC1 ZIC3 ZIC4
6752782
chr3 56769674 rs572141040 G A
HSF1
6752783
chr3 56769682 rs541028881 A G
HSF1
6752784
chr3 56769716 rs9311618 T C
ID4 SCRT1 TCF3 TCF4
6752785
Genes possibly regulated by vista41065[chr3:56769464-56769764]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr3 56654161 56717265 - FAM208A ENSG00000163946.9 56717265 0.73 0.98 3784 47801
Expression level of Genes
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miRNAs possibly regulated by vista41065[chr3:56769464-56769764]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results