EnhancerDB
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  3. vista41071[chr3:56873709-56874050]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista41071[chr3:56873709-56874050]
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Tissue distribution of vista41071
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Transcription factor that possibly regulate vista41071[chr3:56873709-56874050]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr3 56873713 56873717 NFE TRANSFAC yes 2601851
chr3 56873713 56873717 NFE TRANSFAC yes 70988964
chr3 56873714 56873719 GATA2 JASPAR yes 2601852
chr3 56873714 56873719 GATA2 JASPAR yes 70988965
chr3 56873716 56873722 MZF1 JASPAR yes 2601853
chr3 56873716 56873722 MZF1 JASPAR yes 70988966
chr3 56873723 56873734 EBF1 JASPAR yes 2601854
chr3 56873723 56873734 EBF1 JASPAR yes 70988967
chr3 56873731 56873744 SMAD2 JASPAR yes 2601855
chr3 56873731 56873744 SMAD2 JASPAR yes 70988968
chr3 56873737 56873747 NHLH1 JASPAR yes 2601856
chr3 56873737 56873747 NHLH1 JASPAR yes 70988969
chr3 56873744 56873759 PRDM1 JASPAR yes 2601857
chr3 56873744 56873759 PRDM1 JASPAR yes 70988970
chr3 56873787 56873805 ESR2 JASPAR yes 2601858
chr3 56873787 56873805 ESR2 JASPAR yes 70988971
chr3 56873793 56873806 NR2F1 JASPAR yes 2601859
chr3 56873793 56873806 NR2F1 JASPAR yes 70988972
chr3 56873828 56873840 PKNOX1 JASPAR yes 2601860
chr3 56873828 56873840 PKNOX2 JASPAR yes 2601861
chr3 56873828 56873840 TGIF1 JASPAR yes 2601862
chr3 56873828 56873840 TGIF2 JASPAR yes 2601863
chr3 56873828 56873840 PKNOX1 JASPAR yes 70988973
chr3 56873828 56873840 PKNOX2 JASPAR yes 70988974
chr3 56873828 56873840 TGIF1 JASPAR yes 70988975
chr3 56873828 56873840 TGIF2 JASPAR yes 70988976
chr3 56873851 56873855 YY1 TRANSFAC yes 2601864
chr3 56873851 56873855 YY1 TRANSFAC yes 70988977
chr3 56873856 56873870 RXRB JASPAR yes 2601865
chr3 56873856 56873870 RXRG JASPAR yes 2601866
chr3 56873856 56873870 RXRB JASPAR yes 70988978
chr3 56873856 56873870 RXRG JASPAR yes 70988979
chr3 56873857 56873871 PLAG1 JASPAR yes 2601867
chr3 56873857 56873871 PLAG1 JASPAR yes 70988980
chr3 56873865 56873874 ZEB1 JASPAR yes 2601868
chr3 56873865 56873874 ZEB1 JASPAR yes 70988981
chr3 56873865 56873877 NHLH1 JASPAR yes 2601869
chr3 56873865 56873877 NHLH1 JASPAR yes 70988982
chr3 56873868 56873873 USF2 TRANSFAC yes 2601870
chr3 56873868 56873873 USF2 TRANSFAC yes 70988983
chr3 56873873 56873881 EHF JASPAR yes 2601871
chr3 56873873 56873881 EHF JASPAR yes 70988984
chr3 56873879 56873885 MAZ TRANSFAC yes 2601872
chr3 56873879 56873885 MAZ TRANSFAC yes 70988985
chr3 56873889 56873893 H4TF2 TRANSFAC yes 2601873
chr3 56873889 56873893 H4TF2 TRANSFAC yes 70988986
chr3 56873894 56873912 ESR1 JASPAR yes 2601874
chr3 56873894 56873912 ESR1 JASPAR yes 70988987
chr3 56873910 56873925 PRDM1 JASPAR yes 2601875
chr3 56873910 56873925 PRDM1 JASPAR yes 70988988
chr3 56873950 56873968 TP53 JASPAR yes 2601876
chr3 56873950 56873968 TP63 JASPAR yes 2601877
chr3 56873950 56873968 TP73 JASPAR yes 2601878
chr3 56873950 56873968 TP53 JASPAR yes 70988989
chr3 56873950 56873968 TP63 JASPAR yes 70988990
chr3 56873950 56873968 TP73 JASPAR yes 70988991
chr3 56873951 56873971 TP53 JASPAR yes 2601879
chr3 56873951 56873971 TP53 JASPAR yes 70988992
chr3 56873960 56873970 HEY2 JASPAR yes 2601880
chr3 56873960 56873970 HEY2 JASPAR yes 70988993
chr3 56873981 56873995 EBF1 JASPAR yes 2601881
chr3 56873981 56873995 EBF1 JASPAR yes 70988994
chr3 56873982 56873993 EBF1 JASPAR yes 2601882
chr3 56873982 56873993 EBF1 JASPAR yes 70988995
chr3 56873999 56874011 ZBTB7B JASPAR yes 2601883
chr3 56873999 56874011 ZBTB7B JASPAR yes 70988996
chr3 56874018 56874022 YY1 TRANSFAC yes 2601884
chr3 56874018 56874022 YY1 TRANSFAC yes 70988997
chr3 56874018 56874033 JUND JASPAR yes 2601885
chr3 56874018 56874033 JUND JASPAR yes 70988998
chr3 56874030 56874044 TLX1 JASPAR yes 2601886
chr3 56874030 56874044 TLX1 JASPAR yes 70988999
chr3 56874036 56874050 JUN JASPAR yes 2601887
chr3 56874036 56874050 JUN JASPAR yes 70989000
chr3 56874041 56874062 ZNF263 JASPAR yes 2601888
chr3 56874041 56874062 ZNF263 JASPAR yes 70989001
SNP sites on vista41071[chr3:56873709-56874050]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr3 56873711 rs115241112 G A no 6753882
chr3 56873815 rs140628511 C T no 6753883
chr3 56873839 rs76121262 C A,T
PKNOX1 PKNOX2 TGIF1 TGIF2
6753884
chr3 56873954 rs546518351 G A
TP53 TP63 TP73
6753885
chr3 56873957 rs78431131 C A
TP53 TP63 TP73
6753886
chr3 56874033 rs7636889 G A
JUND TLX1
6753887
Genes possibly regulated by vista41071[chr3:56873709-56874050]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
Expression level of Genes
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No results
miRNAs possibly regulated by vista41071[chr3:56873709-56874050]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results