EnhancerDB
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  3. vista41078[chr3:57102609-57102968]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista41078[chr3:57102609-57102968]
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Tissue distribution of vista41078
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Transcription factor that possibly regulate vista41078[chr3:57102609-57102968]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr3 57102527 57103032 NFIC UCSC Txn Factor no Conserved 108529331
chr3 57102568 57102826 EBF1 UCSC Txn Factor no Conserved 108529332
chr3 57102579 57102962 RUNX3 UCSC Txn Factor no Conserved 108529333
chr3 57102581 57102964 FOXM1 UCSC Txn Factor no Conserved 108529334
chr3 57102581 57102981 ATF2 UCSC Txn Factor no Conserved 108529335
chr3 57102587 57102879 PAX5 UCSC Txn Factor no Conserved 108529336
chr3 57102595 57103015 RELA UCSC Txn Factor no Conserved 108529337
chr3 57102628 57102818 BATF UCSC Txn Factor no Conserved 108529338
chr3 57102634 57102957 NFATC1 UCSC Txn Factor no Conserved 108529339
chr3 57102606 57102610 YY1 TRANSFAC yes 2627032
chr3 57102606 57102610 YY1 TRANSFAC yes 70989242
chr3 57102615 57102635 TP63 JASPAR yes 2627033
chr3 57102615 57102635 TP63 JASPAR yes 70989243
chr3 57102637 57102641 TEAD2 TRANSFAC yes 2627034
chr3 57102637 57102641 TEAD2 TRANSFAC yes 70989244
chr3 57102637 57102642 TBP TRANSFAC yes 2627035
chr3 57102637 57102642 TBP TRANSFAC yes 70989245
chr3 57102637 57102643 TFIID TRANSFAC yes 2627036
chr3 57102637 57102643 TFIID TRANSFAC yes 70989246
chr3 57102667 57102676 H4TF2 TRANSFAC yes 2627037
chr3 57102667 57102676 H4TF2 TRANSFAC yes 70989247
chr3 57102672 57102678 MZF1 JASPAR yes 2627038
chr3 57102672 57102678 MZF1 JASPAR yes 70989248
chr3 57102673 57102683 SP1 JASPAR yes 2627039
chr3 57102673 57102683 SP1 JASPAR yes 70989249
chr3 57102677 57102691 EBF1 JASPAR yes 2627040
chr3 57102677 57102691 EBF1 JASPAR yes 70989250
chr3 57102678 57102689 EBF1 JASPAR yes 2627041
chr3 57102678 57102689 EBF1 JASPAR yes 70989251
chr3 57102679 57102690 EBF1 JASPAR yes 2627042
chr3 57102679 57102690 EBF1 JASPAR yes 70989252
chr3 57102690 57102699 JDP2 JASPAR yes 2627043
chr3 57102690 57102699 JDP2 JASPAR yes 70989253
chr3 57102701 57102707 GATA3 JASPAR yes 2627044
chr3 57102701 57102707 GATA3 JASPAR yes 70989254
chr3 57102706 57102710 ESR1 TRANSFAC yes 2627045
chr3 57102706 57102710 ESR1 TRANSFAC yes 70989255
chr3 57102711 57102721 RORA JASPAR yes 2627046
chr3 57102711 57102721 RORA JASPAR yes 70989256
chr3 57102712 57102723 ESRRA JASPAR yes 2627047
chr3 57102712 57102723 ESRRB JASPAR yes 2627048
chr3 57102712 57102723 ESRRA JASPAR yes 70989257
chr3 57102712 57102723 ESRRB JASPAR yes 70989258
chr3 57102714 57102722 NR4A2 JASPAR yes 2627049
chr3 57102714 57102722 NR4A2 JASPAR yes 70989259
chr3 57102716 57102720 ESR1 TRANSFAC yes 2627050
chr3 57102716 57102720 ESR1 TRANSFAC yes 70989260
chr3 57102744 57102748 LFA1 TRANSFAC yes 2627051
chr3 57102744 57102748 LFA1 TRANSFAC yes 70989261
chr3 57102754 57102766 E2F1 JASPAR yes 2627052
chr3 57102754 57102766 E2F1 JASPAR yes 70989262
chr3 57102758 57102766 E2F1 JASPAR yes 2627053
chr3 57102758 57102766 E2F1 JASPAR yes 70989263
chr3 57102777 57102780 MYB TRANSFAC yes 2627054
chr3 57102777 57102780 MYB TRANSFAC yes 70989264
chr3 57102781 57102794 ELF3 JASPAR yes 2627055
chr3 57102781 57102794 ELF3 JASPAR yes 70989265
chr3 57102782 57102793 ELF5 JASPAR yes 2627056
chr3 57102782 57102793 ELF5 JASPAR yes 70989266
chr3 57102782 57102794 EHF JASPAR yes 2627057
chr3 57102782 57102794 EHF JASPAR yes 70989267
chr3 57102782 57102795 ELF1 JASPAR yes 2627058
chr3 57102782 57102795 ELF1 JASPAR yes 70989268
chr3 57102785 57102790 ETS2 TRANSFAC yes 2627059
chr3 57102785 57102790 ETS2 TRANSFAC yes 70989269
chr3 57102803 57102815 HLF JASPAR yes 2627060
chr3 57102803 57102815 HLF JASPAR yes 70989270
chr3 57102803 57102818 JUND JASPAR yes 2627061
chr3 57102803 57102818 JUND JASPAR yes 70989271
chr3 57102813 57102828 FOXP1 JASPAR yes 2627062
chr3 57102813 57102828 FOXP1 JASPAR yes 70989272
chr3 57102820 57102830 MZF1 JASPAR yes 2627063
chr3 57102820 57102830 MZF1 JASPAR yes 70989273
chr3 57102827 57102830 MYB TRANSFAC yes 2627064
chr3 57102827 57102830 MYB TRANSFAC yes 70989274
chr3 57102829 57102839 NFATC3 JASPAR yes 2627065
chr3 57102829 57102839 NFATC3 JASPAR yes 70989275
chr3 57102834 57102844 MAX JASPAR yes 2627066
chr3 57102834 57102844 MAX JASPAR yes 70989276
chr3 57102847 57102867 RREB1 JASPAR yes 2627067
chr3 57102847 57102867 RREB1 JASPAR yes 70989277
chr3 57102855 57102865 ZNF740 JASPAR yes 2627068
chr3 57102855 57102865 ZNF740 JASPAR yes 70989278
chr3 57102857 57102867 ZNF740 JASPAR yes 2627069
chr3 57102857 57102867 ZNF740 JASPAR yes 70989279
chr3 57102872 57102882 NFATC3 JASPAR yes 2627070
chr3 57102872 57102882 NFATC3 JASPAR yes 70989280
chr3 57102874 57102882 FOXO3 JASPAR yes 2627071
chr3 57102874 57102882 FOXO3 JASPAR yes 70989281
chr3 57102907 57102925 SRF JASPAR yes 2627072
chr3 57102907 57102925 SRF JASPAR yes 70989282
chr3 57102941 57102962 IRF1 JASPAR yes 2627073
chr3 57102941 57102962 IRF1 JASPAR yes 70989283
chr3 57102942 57102963 IRF1 JASPAR yes 2627074
chr3 57102942 57102963 IRF1 JASPAR yes 70989284
chr3 57102944 57102965 IRF1 JASPAR yes 2627075
chr3 57102944 57102965 IRF1 JASPAR yes 70989285
chr3 57102945 57102966 IRF1 JASPAR yes 2627076
chr3 57102945 57102966 IRF1 JASPAR yes 70989286
chr3 57102946 57102961 FOXP1 JASPAR yes 2627077
chr3 57102946 57102961 FOXP1 JASPAR yes 70989287
chr3 57102946 57102967 IRF1 JASPAR yes 2627078
chr3 57102946 57102967 IRF1 JASPAR yes 70989288
chr3 57102947 57102962 FOXP1 JASPAR yes 2627079
chr3 57102947 57102962 FOXP1 JASPAR yes 70989289
chr3 57102948 57102963 FOXP1 JASPAR yes 2627080
chr3 57102948 57102963 FOXP1 JASPAR yes 70989290
chr3 57102949 57102964 FOXP1 JASPAR yes 2627081
chr3 57102949 57102964 FOXP1 JASPAR yes 70989291
chr3 57102950 57102965 FOXP1 JASPAR yes 2627082
chr3 57102950 57102965 FOXP1 JASPAR yes 70989292
chr3 57102951 57102966 FOXP1 JASPAR yes 2627083
chr3 57102951 57102966 FOXP1 JASPAR yes 70989293
chr3 57102952 57102967 FOXP1 JASPAR yes 2627084
chr3 57102952 57102967 FOXP1 JASPAR yes 70989294
chr3 57102953 57102968 FOXP1 JASPAR yes 2627085
chr3 57102953 57102968 FOXP1 JASPAR yes 70989295
SNP sites on vista41078[chr3:57102609-57102968]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr3 57102615 rs75872475 T C
ATF2 EBF1 FOXM1 NFIC PAX5 RELA RUNX3 TP63
6756367
chr3 57102671 rs564448761 C T
ATF2 BATF EBF1 FOXM1 H4TF2 NFATC1 NFIC PAX5 RELA RUNX3
6756368
chr3 57102680 rs116926320 C T
ATF2 BATF EBF1 FOXM1 NFATC1 NFIC PAX5 RELA RUNX3 SP1
6756369
chr3 57102683 rs79226747 C G
ATF2 BATF EBF1 FOXM1 NFATC1 NFIC PAX5 RELA RUNX3 SP1
6756370
chr3 57102847 rs2129820 A G
ATF2 FOXM1 NFATC1 NFIC PAX5 RELA RREB1 RUNX3
6756371
chr3 57102850 rs80242482 C T
ATF2 FOXM1 NFATC1 NFIC PAX5 RELA RREB1 RUNX3
6756372
chr3 57102949 rs199587996 T C
ATF2 FOXM1 FOXP1 IRF1 NFATC1 NFIC RELA RUNX3
6756373
chr3 57102961 rs566975890 T C
ATF2 FOXM1 FOXP1 IRF1 NFIC RELA RUNX3
6756374
Genes possibly regulated by vista41078[chr3:57102609-57102968]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr3 56761446 57113357 - ARHGEF3 ENSG00000163947.7 57113357 0.8 1.0 3785 89611
chr3 57094469 57109460 + SPATA12 ENSG00000186451.1 57094469 0.76 1.0 3786 91860
Expression level of Genes
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miRNAs possibly regulated by vista41078[chr3:57102609-57102968]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results