EnhancerDB
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  3. vista41082[chr3:57197470-57197866]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista41082[chr3:57197470-57197866]
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Tissue distribution of vista41082
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Transcription factor that possibly regulate vista41082[chr3:57197470-57197866]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr3 57197468 57197482 GLIS3 JASPAR yes 2631995
chr3 57197468 57197482 GLIS3 JASPAR yes 70989462
chr3 57197478 57197488 NFATC3 JASPAR yes 2631996
chr3 57197478 57197488 NFATC3 JASPAR yes 70989463
chr3 57197515 57197531 RFX4 JASPAR yes 2631997
chr3 57197515 57197531 RFX5 JASPAR yes 2631998
chr3 57197515 57197531 RFX4 JASPAR yes 70989464
chr3 57197515 57197531 RFX5 JASPAR yes 70989465
chr3 57197516 57197535 RFX2 JASPAR yes 2631999
chr3 57197516 57197535 RFX2 JASPAR yes 70989466
chr3 57197518 57197533 RFX5 JASPAR yes 2632000
chr3 57197518 57197533 RFX5 JASPAR yes 70989467
chr3 57197521 57197530 NFIX JASPAR yes 2632001
chr3 57197521 57197530 NFIX JASPAR yes 70989468
chr3 57197522 57197528 NFIC JASPAR yes 2632002
chr3 57197522 57197528 NFIC JASPAR yes 70989469
chr3 57197565 57197571 YY1 JASPAR yes 2632003
chr3 57197565 57197571 YY1 JASPAR yes 70989470
chr3 57197577 57197592 MEF2C JASPAR yes 2632004
chr3 57197577 57197592 MEF2C JASPAR yes 70989471
chr3 57197578 57197593 MEF2A JASPAR yes 2632005
chr3 57197578 57197593 MEF2A JASPAR yes 70989472
chr3 57197579 57197591 MEF2A JASPAR yes 2632006
chr3 57197579 57197591 MEF2D JASPAR yes 2632007
chr3 57197579 57197591 MEF2A JASPAR yes 70989473
chr3 57197579 57197591 MEF2D JASPAR yes 70989474
chr3 57197582 57197594 IRF1 JASPAR yes 2632008
chr3 57197582 57197594 IRF1 JASPAR yes 70989475
chr3 57197615 57197631 NFYA JASPAR yes 2632009
chr3 57197615 57197631 NFYA JASPAR yes 70989476
chr3 57197620 57197624 H1TF2 TRANSFAC yes 2632010
chr3 57197620 57197624 NFE TRANSFAC yes 2632011
chr3 57197620 57197624 SRF TRANSFAC yes 2632012
chr3 57197620 57197624 H1TF2 TRANSFAC yes 70989477
chr3 57197620 57197624 NFE TRANSFAC yes 70989478
chr3 57197620 57197624 SRF TRANSFAC yes 70989479
chr3 57197620 57197626 NFYC TRANSFAC yes 2632013
chr3 57197620 57197626 NFYC TRANSFAC yes 70989480
chr3 57197638 57197651 HSF2 JASPAR yes 2632014
chr3 57197638 57197651 HSF2 JASPAR yes 70989481
chr3 57197642 57197657 HSF1 JASPAR yes 2632015
chr3 57197642 57197657 HSF1 JASPAR yes 70989482
chr3 57197643 57197656 HSF1 JASPAR yes 2632016
chr3 57197643 57197656 HSF2 JASPAR yes 2632017
chr3 57197643 57197656 HSF4 JASPAR yes 2632018
chr3 57197643 57197656 HSF1 JASPAR yes 70989483
chr3 57197643 57197656 HSF2 JASPAR yes 70989484
chr3 57197643 57197656 HSF4 JASPAR yes 70989485
chr3 57197657 57197668 FOXA1 JASPAR yes 2632019
chr3 57197657 57197668 FOXA1 JASPAR yes 70989486
chr3 57197657 57197672 FOXA1 JASPAR yes 2632020
chr3 57197657 57197672 FOXA1 JASPAR yes 70989487
chr3 57197658 57197669 FOXB1 JASPAR yes 2632021
chr3 57197658 57197669 FOXC1 JASPAR yes 2632022
chr3 57197658 57197669 FOXB1 JASPAR yes 70989488
chr3 57197658 57197669 FOXC1 JASPAR yes 70989489
chr3 57197658 57197670 FOXC2 JASPAR yes 2632023
chr3 57197658 57197670 FOXC2 JASPAR yes 70989490
chr3 57197710 57197719 SRY JASPAR yes 2632024
chr3 57197710 57197719 SRY JASPAR yes 70989491
chr3 57197712 57197723 CDX2 JASPAR yes 2632025
chr3 57197712 57197723 CDX2 JASPAR yes 70989492
chr3 57197713 57197724 HOXA10 JASPAR yes 2632026
chr3 57197713 57197724 HOXA10 JASPAR yes 70989493
chr3 57197714 57197723 CDX1 JASPAR yes 2632027
chr3 57197714 57197723 CDX1 JASPAR yes 70989494
chr3 57197714 57197724 HOXA13 JASPAR yes 2632028
chr3 57197714 57197724 HOXB13 JASPAR yes 2632029
chr3 57197714 57197724 HOXD13 JASPAR yes 2632030
chr3 57197714 57197724 HOXA13 JASPAR yes 70989495
chr3 57197714 57197724 HOXB13 JASPAR yes 70989496
chr3 57197714 57197724 HOXD13 JASPAR yes 70989497
chr3 57197729 57197744 HNF1A JASPAR yes 2632031
chr3 57197729 57197744 HNF1A JASPAR yes 70989498
chr3 57197730 57197743 HNF1B JASPAR yes 2632032
chr3 57197730 57197743 HNF1B JASPAR yes 70989499
chr3 57197784 57197792 EHF JASPAR yes 2632033
chr3 57197784 57197792 EHF JASPAR yes 70989500
chr3 57197788 57197793 ETS2 TRANSFAC yes 2632034
chr3 57197788 57197793 ETS2 TRANSFAC yes 70989501
chr3 57197793 57197804 NFE2L2 JASPAR yes 2632035
chr3 57197793 57197804 NFE2L2 JASPAR yes 70989502
chr3 57197807 57197817 SP1 JASPAR yes 2632036
chr3 57197807 57197817 SP1 JASPAR yes 70989503
chr3 57197807 57197828 ZNF263 JASPAR yes 2632037
chr3 57197807 57197828 ZNF263 JASPAR yes 70989504
chr3 57197808 57197816 SP1 TRANSFAC yes 2632038
chr3 57197808 57197816 SP1 TRANSFAC yes 70989505
chr3 57197808 57197829 ZNF263 JASPAR yes 2632039
chr3 57197808 57197829 ZNF263 JASPAR yes 70989506
chr3 57197809 57197814 SP1 TRANSFAC yes 2632040
chr3 57197809 57197814 SP1 TRANSFAC yes 70989507
chr3 57197809 57197820 E2F4 JASPAR yes 2632041
chr3 57197809 57197820 E2F4 JASPAR yes 70989508
chr3 57197809 57197829 RREB1 JASPAR yes 2632042
chr3 57197809 57197829 RREB1 JASPAR yes 70989509
chr3 57197810 57197815 SP1 TRANSFAC yes 2632043
chr3 57197810 57197815 SP1 TRANSFAC yes 70989510
chr3 57197810 57197816 SP1 TRANSFAC yes 2632044
chr3 57197810 57197816 SP1 TRANSFAC yes 70989511
chr3 57197810 57197820 SP1 JASPAR yes 2632045
chr3 57197810 57197820 SP1 JASPAR yes 70989512
chr3 57197811 57197821 ZNF740 JASPAR yes 2632046
chr3 57197811 57197821 ZNF740 JASPAR yes 70989513
chr3 57197813 57197834 ZNF263 JASPAR yes 2632047
chr3 57197813 57197834 ZNF263 JASPAR yes 70989514
chr3 57197814 57197828 PLAG1 JASPAR yes 2632048
chr3 57197814 57197828 PLAG1 JASPAR yes 70989515
chr3 57197815 57197822 SP1 TRANSFAC yes 2632049
chr3 57197815 57197822 SP1 TRANSFAC yes 70989516
chr3 57197815 57197825 SP1 JASPAR yes 2632050
chr3 57197815 57197825 SP1 JASPAR yes 70989517
chr3 57197815 57197829 PLAG1 JASPAR yes 2632051
chr3 57197815 57197829 PLAG1 JASPAR yes 70989518
chr3 57197815 57197836 ZNF263 JASPAR yes 2632052
chr3 57197815 57197836 ZNF263 JASPAR yes 70989519
chr3 57197816 57197824 SP1 TRANSFAC yes 2632053
chr3 57197816 57197824 SP1 TRANSFAC yes 70989520
chr3 57197816 57197837 ZNF263 JASPAR yes 2632054
chr3 57197816 57197837 ZNF263 JASPAR yes 70989521
chr3 57197817 57197822 SP1 TRANSFAC yes 2632055
chr3 57197817 57197822 SP1 TRANSFAC yes 70989522
chr3 57197817 57197828 E2F4 JASPAR yes 2632056
chr3 57197817 57197828 E2F4 JASPAR yes 70989523
chr3 57197818 57197823 SP1 TRANSFAC yes 2632057
chr3 57197818 57197823 SP1 TRANSFAC yes 70989524
chr3 57197818 57197824 SP1 TRANSFAC yes 2632058
chr3 57197818 57197824 SP1 TRANSFAC yes 70989525
chr3 57197818 57197828 SP1 JASPAR yes 2632059
chr3 57197818 57197828 SP1 JASPAR yes 70989526
chr3 57197819 57197829 ZNF740 JASPAR yes 2632060
chr3 57197819 57197829 ZNF740 JASPAR yes 70989527
chr3 57197819 57197839 RREB1 JASPAR yes 2632061
chr3 57197819 57197839 RREB1 JASPAR yes 70989528
chr3 57197822 57197836 PLAG1 JASPAR yes 2632062
chr3 57197822 57197836 PLAG1 JASPAR yes 70989529
chr3 57197824 57197834 SP1 JASPAR yes 2632063
chr3 57197824 57197834 SP1 JASPAR yes 70989530
chr3 57197825 57197835 SP1 JASPAR yes 2632064
chr3 57197825 57197835 SP1 JASPAR yes 70989531
chr3 57197825 57197846 ZNF263 JASPAR yes 2632065
chr3 57197825 57197846 ZNF263 JASPAR yes 70989532
chr3 57197826 57197831 ETS2 TRANSFAC yes 2632066
chr3 57197826 57197831 ETS2 TRANSFAC yes 70989533
chr3 57197826 57197838 INSM1 JASPAR yes 2632067
chr3 57197826 57197838 INSM1 JASPAR yes 70989534
chr3 57197826 57197846 RREB1 JASPAR yes 2632068
chr3 57197826 57197846 RREB1 JASPAR yes 70989535
chr3 57197831 57197845 PLAG1 JASPAR yes 2632069
chr3 57197831 57197845 PLAG1 JASPAR yes 70989536
chr3 57197831 57197852 ZNF263 JASPAR yes 2632070
chr3 57197831 57197852 ZNF263 JASPAR yes 70989537
chr3 57197837 57197842 SP1 TRANSFAC yes 2632071
chr3 57197837 57197842 SP1 TRANSFAC yes 70989538
chr3 57197837 57197843 SP1 TRANSFAC yes 2632072
chr3 57197837 57197843 SP1 TRANSFAC yes 70989539
chr3 57197838 57197846 SP1 TRANSFAC yes 2632073
chr3 57197838 57197846 WT1 TRANSFAC yes 2632074
chr3 57197838 57197846 SP1 TRANSFAC yes 70989540
chr3 57197838 57197846 WT1 TRANSFAC yes 70989541
chr3 57197840 57197847 SP1 TRANSFAC yes 2632075
chr3 57197840 57197847 SP1 TRANSFAC yes 70989542
chr3 57197840 57197850 SP1 JASPAR yes 2632076
chr3 57197840 57197850 SP1 JASPAR yes 70989543
chr3 57197842 57197847 SP1 TRANSFAC yes 2632077
chr3 57197842 57197847 SP1 TRANSFAC yes 70989544
chr3 57197848 57197865 RARA JASPAR yes 2632078
chr3 57197848 57197865 RARA JASPAR yes 70989545
chr3 57197850 57197865 NR2C2 JASPAR yes 2632079
chr3 57197850 57197865 NR2C2 JASPAR yes 70989546
chr3 57197851 57197865 NR2F1 JASPAR yes 2632080
chr3 57197851 57197865 NR2F1 JASPAR yes 70989547
chr3 57197856 57197869 NR2F1 JASPAR yes 2632081
chr3 57197856 57197869 NR2F1 JASPAR yes 70989548
chr3 57197860 57197864 ESR1 TRANSFAC yes 2632082
chr3 57197860 57197864 ESR1 TRANSFAC yes 70989549
SNP sites on vista41082[chr3:57197470-57197866]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr3 57197474 rs563540237 C T
GLIS3
6756834
chr3 57197549 rs61515277 C A no 6756835
chr3 57197570 rs568173809 T A
YY1
6756836
chr3 57197583 rs187330921 C A
IRF1 MEF2A MEF2C MEF2D
6756837
chr3 57197588 rs556356670 T A
IRF1 MEF2A MEF2C MEF2D
6756838
chr3 57197710 rs144488718 T C
SRY
6756839
Genes possibly regulated by vista41082[chr3:57197470-57197866]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr3 56761446 57113357 - ARHGEF3 ENSG00000163947.7 57113357 0.8 1.0 3785 15887
chr3 57124010 57204334 - IL17RD ENSG00000144730.12 57204334 0.9 1.0 3787 93532
chr3 57231944 57260549 - HESX1 ENSG00000163666.4 57260549 0.72 0.99 3788 37317
chr3 57261765 57307496 + APPL1 ENSG00000157500.6 57261765 0.71 0.98 3789 36101
Expression level of Genes
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miRNAs possibly regulated by vista41082[chr3:57197470-57197866]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results