EnhancerDB
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  3. vista41086[chr3:57566206-57566518]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista41086[chr3:57566206-57566518]
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Tissue distribution of vista41086
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Transcription factor that possibly regulate vista41086[chr3:57566206-57566518]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr3 57566224 57566234 SREBF2 JASPAR yes 70989698
chr3 57566224 57566235 USF1 JASPAR yes 70989699
chr3 57566224 57566235 USF2 JASPAR yes 70989700
chr3 57566233 57566244 E2F6 JASPAR yes 70989701
chr3 57566236 57566244 TBX15 JASPAR yes 70989702
chr3 57566275 57566291 ZNF143 JASPAR yes 70989703
chr3 57566280 57566290 SP1 JASPAR yes 70989704
chr3 57566283 57566292 HIC2 JASPAR yes 70989705
chr3 57566294 57566315 IRF1 JASPAR yes 70989706
chr3 57566326 57566345 PAX5 JASPAR yes 70989707
chr3 57566416 57566420 H4TF2 TRANSFAC yes 70989708
chr3 57566441 57566454 NFKB1 JASPAR yes 70989709
chr3 57566441 57566454 NFKB2 JASPAR yes 70989710
chr3 57566445 57566463 SRF JASPAR yes 70989711
chr3 57566448 57566460 SRF JASPAR yes 70989712
chr3 57566458 57566472 RORA JASPAR yes 70989713
chr3 57566464 57566475 PROP1 JASPAR yes 70989714
chr3 57566470 57566474 YY1 TRANSFAC yes 70989715
chr3 57566482 57566485 MYB TRANSFAC yes 70989716
chr3 57566482 57566497 STAT2 JASPAR yes 70989717
chr3 57566483 57566497 SPI1 JASPAR yes 70989718
chr3 57566483 57566497 SPIC JASPAR yes 70989719
chr3 57566490 57566494 YY1 TRANSFAC yes 70989720
chr3 57566493 57566514 IRF1 JASPAR yes 70989721
chr3 57566495 57566516 IRF1 JASPAR yes 70989722
chr3 57566498 57566513 FOXP1 JASPAR yes 70989723
chr3 57566500 57566515 FOXP1 JASPAR yes 70989724
chr3 57566501 57566516 FOXP1 JASPAR yes 70989725
chr3 57566502 57566517 FOXP1 JASPAR yes 70989726
chr3 57566503 57566518 FOXP1 JASPAR yes 70989727
SNP sites on vista41086[chr3:57566206-57566518]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr3 57566305 rs543970749 A T
IRF1
6757116
chr3 57566460 rs73084408 G A
RORA SRF
6757117
chr3 57566501 rs199769802 C CT
FOXP1 IRF1
6757118
chr3 57566501 rs548994563 C CT
FOXP1 IRF1
6757119
chr3 57566518 rs73084409 A T
FOXP1
6757120
Genes possibly regulated by vista41086[chr3:57566206-57566518]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr3 57327727 57530071 - DNAH12 ENSG00000174844.10 57530071 0.98 0.99 3791 63865
chr3 57542003 57552571 + PDE12 ENSG00000174840.8 57542003 0.57 0.99 3792 75797
chr3 57557090 57583947 - ARF4 ENSG00000168374.6 57583947 0.59 0.99 3793 82571
Expression level of Genes
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miRNAs possibly regulated by vista41086[chr3:57566206-57566518]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results