EnhancerDB
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  3. vista41088[chr3:57637831-57638080]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista41088[chr3:57637831-57638080]
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Tissue distribution of vista41088
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Transcription factor that possibly regulate vista41088[chr3:57637831-57638080]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr3 57637834 57637846 YY1 JASPAR yes 70989737
chr3 57637889 57637899 ALX3 JASPAR yes 70989738
chr3 57637889 57637899 EMX1 JASPAR yes 70989739
chr3 57637889 57637899 GSX2 JASPAR yes 70989740
chr3 57637889 57637899 HOXA2 JASPAR yes 70989741
chr3 57637889 57637899 HOXB2 JASPAR yes 70989742
chr3 57637889 57637899 HOXB3 JASPAR yes 70989743
chr3 57637889 57637899 MEOX1 JASPAR yes 70989744
chr3 57637889 57637899 MEOX2 JASPAR yes 70989745
chr3 57637889 57637899 MIXL1 JASPAR yes 70989746
chr3 57637889 57637899 MNX1 JASPAR yes 70989747
chr3 57637890 57637898 LMX1A JASPAR yes 70989748
chr3 57637890 57637898 LMX1B JASPAR yes 70989749
chr3 57637890 57637898 NKX6-1 JASPAR yes 70989750
chr3 57637890 57637898 NKX6-2 JASPAR yes 70989751
chr3 57637890 57637898 PDX1 JASPAR yes 70989752
chr3 57637890 57637898 VAX1 JASPAR yes 70989753
chr3 57637890 57637898 VAX2 JASPAR yes 70989754
chr3 57637890 57637898 VSX1 JASPAR yes 70989755
chr3 57637890 57637904 POU1F1 JASPAR yes 70989756
chr3 57637891 57637903 POU3F2 JASPAR yes 70989757
chr3 57637891 57637904 POU3F3 JASPAR yes 70989758
chr3 57637895 57637898 MYB TRANSFAC yes 70989759
chr3 57637904 57637922 RARA JASPAR yes 70989760
chr3 57637909 57637915 HiNF-A TRANSFAC yes 70989761
chr3 57637915 57637931 SOX8 JASPAR yes 70989762
chr3 57637931 57637945 JUN JASPAR yes 70989763
chr3 57637933 57637944 BATF JASPAR yes 70989764
chr3 57637934 57637945 FOSL2 JASPAR yes 70989765
chr3 57637934 57637945 JUNB JASPAR yes 70989766
chr3 57637934 57637945 NFE2L2 JASPAR yes 70989767
chr3 57637935 57637946 FOS JASPAR yes 70989768
chr3 57637935 57637946 FOSL1 JASPAR yes 70989769
chr3 57637935 57637946 JUND JASPAR yes 70989770
chr3 57637935 57637946 NFE2 JASPAR yes 70989771
chr3 57637936 57637945 JDP2 JASPAR yes 70989772
chr3 57637936 57637947 FOSL2 JASPAR yes 70989773
chr3 57637936 57637947 JUNB JASPAR yes 70989774
chr3 57637936 57637950 JUN JASPAR yes 70989775
chr3 57637937 57637948 BATF JASPAR yes 70989776
chr3 57637981 57637992 STAT1 JASPAR yes 70989777
chr3 57637997 57638009 YY1 JASPAR yes 70989778
chr3 57638015 57638019 YY1 TRANSFAC yes 70989779
chr3 57638020 57638041 REST JASPAR yes 70989780
chr3 57638021 57638040 REST JASPAR yes 70989781
chr3 57638031 57638042 NFKB1 JASPAR yes 70989782
chr3 57638035 57638053 RARA JASPAR yes 70989783
chr3 57638059 57638074 RFX5 JASPAR yes 70989784
chr3 57638064 57638067 MYB TRANSFAC yes 70989785
SNP sites on vista41088[chr3:57637831-57638080]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
Genes possibly regulated by vista41088[chr3:57637831-57638080]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr3 57542003 57552571 + PDE12 ENSG00000174840.8 57542003 0.57 0.99 3792 4172
chr3 57557090 57583947 - ARF4 ENSG00000168374.6 57583947 0.59 0.99 3793 46116
chr3 57611184 57678816 - DENND6A ENSG00000174839.8 57678816 0.64 1.0 3794 59264
Expression level of Genes
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miRNAs possibly regulated by vista41088[chr3:57637831-57638080]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results